BGIOSGA022684

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Revision as of 13:21, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022684| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022684, complete gene.| tag = OsI_225...")
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Gene Name

BGIOSGA022684

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022684, complete gene.

LocusTag

OsI_22511

Ensembl Transcript ID

BGIOSGA022684-TA

Ensembl Protein ID

BGIOSGA022684-PA

Length

3532

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:10215386..10218917

Sequence Coding Region

10215386..10216892,10218054..10218721,10218828..10218917

Genome Context

<gbrowseImage1> name=IndicaChromosome06:10215386..10218917 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:10215386..10218917 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCTCGTCTCCGATCTGCTTACGAAGTCTGCAGGGATTACGCCTGCTCGCACCTCGTGCCAATGGGGCAATCTTCGCGATGTTTTGGTAGGTTTTCAGATTGGAAACGGAGGGTTCTGTTGGAGTTCGGAACAATATAGGATTCCCTGGGCTGGGTCCGTGTGGAAGTGGGACTCGGCTTGGAGGATCAATATAAACAGTCGTCTGCAAGAGCCATGGATCCAACAAATCCAATCTCAGGAAGCAGAATTCATCGTTCGTCTTCATTGCCTGTGTCGTCGATTCGCTAGAGGTCGATTTATGGCTTCTGCTGGTGGTGGGGGCGAAAAAGGGATCATCACTGGGATGATTACCCGCCCGAAGCTGCCTGAAGGAGCCATGATCTTGCAAACGAATCAGACCCTGGCTTTGTCGGCGGCGGTGTCGAAGGAAGACCAACAGGATAAGGCTGCCCAGGAGAAGATGGCTGACTTGCATCTTGGAGCGGATCCTCAAAACAGTACCAAGCAGGGTCCAATGGCATTCACTGAAGGGGAGATCCACGACGAGGAGGAGGACATCGTCGAGGTGTATATCGACGAGGAAGAGATTAAAAATACAGATAAGTGGACAGTTTTGGCTCGGTTCTATTCCATCAGAACTCCTAACCAAGTGGCTCTCTTTGAGGATATGAGTCGAGCGTGGAGACTCCGTTCAGATATGAATTATAAGTCACTAAGGGATAATCTCTTCATCATTGCCTTCAGCAATGAAGGTGATTTCAAGTTTGTCACTCAAGGAGGTCCATGGCTGCATAGGGGAGATGCCTTACTGGTTGCTGAATTTAATGGGCTGACTAGTCCGTCAAACATCCCATTAGAAGTGGTTCCAATCTGGATTAGAATCTATGATTTACCGTTAGTTCTGATGACAAAAGCTAGAGGTGAACTGTATGGCAGCAAATTCGGTAGGGTTCGGGAGGTTGATGTGGAAGCGGATGGCCGAAACAGACACGATTTCTTCCGTATCAGGGTGGATTTGCCGGTTACAAAACCTCTGAAATCGAAGATAGCTATTAAGATTAATGTGCATGGGAGTGAGGAGATCAAGAGGTTTGATGTCAGATATGAGCGGATTCCATATTTTTGCTTCTTCTGTGGCTTTATTGGGCATTCAGATAAAGATTGCGATAAGAAGGGTGTGAATACTGCTGCTCCGTTCCGTTTTTCTGCTGAACTGCGTTGCTCACCACTGAAGCCTTTCGACAGGAAAGTTAGCAGAGTTAAGGCAACTAATCAATCAGGTGCTTCACGGAGGCTGGTGTTTCGGGGCGCGGGGAGTGCAGGCTCTTCATCATCAAGGAAGGCCCAGGAAGAACAGTGGGATGAGGCTATTCCTCAGAGAGCTGATGATCATGATGGTTTTGAAACAAGAGAAAAGGCAGGGGACGTCACAATAGATGAACAACTTGCACACCAAACAGATAAGTTAAATGTCTCTGAGAGGGCAGTCCAGGAAGGGACAGAAAAGGGGAAAAGGAAAACACATTGGAAATCCTGGGAGTGTTTAACTCGGCCGAAGAGCAACGGGGGCCTGGGTTTTAGAGATTTTCGTCTCTTCAACCAAGCACTTCTAGCACGGCAGGCCTGGCGGCTCATTGTTAATCCTGACAGTCTATGTGCAAGGGTACTCAAGGCAAAATATTTTCCAAATGGTTCCCTTGTGGATACAAGTTTTGGAGGAAATGCCTCCCCGGTGTGGAAAGCAATTGAGTATGGGCTGTCACTTCTTAAGGAAGGAATTATATGGAGAATCGGGAATGGGAAGTCAGTGCGCATTTGGAGAGACCCTTGGTTGCCAAGGGATTTTTCCAGACGGCCAATCACACGCAAAGGTAACTGCAGACTAAAATGGGTTTCGGATCTGCTGTCAGAAAATGGTGCCTGGGATGAAACCAGAGTAAACCAGGTGTTTCTACCTGTTGATGCTGAAACAATATGCAGCATCCGGGTCTCTTCACGGCAAGAAGATGACTTTGTAGCATGGCACCCGGATAAACATGGCAAATTTTCAGTAAGGAGCGCATATGGGCTCGCTTGTAACCTTGTTAATATGGAGACCAGTTCCAGTTCTTCTTCCGCTGGATGCAAAAGAATGTGGAATCTTATATGGCAGACCAATGCCCCCCAAAAGAAAAGGAAGACACCAGGCATGTGTTGTGCAGATGTCCTCACGCCAGGAACCTATGGGGGGCCATGTGTGAGGCGGGTCATATATCCCTAA</cdnaseq>

Protein Sequence

<aaseq>MELVSDLLTKSAGITPARTSCQWGNLRDVLVGFQIGNGGFCWSSEQYRIPWAGSVWKWDSAWRININSRLQEPWIQQIQSQEAEFIVRLHCLCRRFARGRFMASAGGGGEKGIITGMITRPKLPEGAMILQTNQTLALSAAVSKEDQQDKAAQEKMADLHLGADPQNSTKQGPMAFTEGEIHDEEEDIVEVYIDEEEIKNTDKWTVLARFYSIRTPNQVALFEDMSRAWRLRSDMNYKSLRDNLFIIAFSNEGDFKFVTQGGPWLHRGDALLVAEFNGLTSPSNIPLEVVPIWIRIYDLPLVLMTKARGELYGSKFGRVREVDVEADGRNRHDFFRIRVDLPVTKPLKSKIAIKINVHGSEEIKRFDVRYERIPYFCFFCGFIGHSDKDCDKKGVNTAAPFRFSAELRCSPLKPFDRKVSRVKATNQSGASRRLVFRGAGSAGSSSSRKAQEEQWDEAIPQRADDHDGFETREKAGDVTIDEQLAHQTDKLNVSERAVQEGTEKGKRKTHWKSWECLTRPKSNGGLGFRDFRLFNQALLARQAWRLIVNPDSLCARVLKAKYFPNGSLVDTSFGGNASPVWKAIEYGLSLLKEGIIWRIGNGKSVRIWRDPWLPRDFSRRPITRKGNCRLKWVSDLLSENGAWDETRVNQVFLPVDAETICSIRVSSRQEDDFVAWHPDKHGKFSVRSAYGLACNLVNMETSSSSSSAGCKRMWNLIWQTNAPQKKRKTPGMCCADVLTPGTYGGPCVRRVIYP</aaseq>

Gene Sequence

<dnaseqindica>1..1507#2669..3336#3443..3532#ATGGAGCTCGTCTCCGATCTGCTTACGAAGTCTGCAGGGATTACGCCTGCTCGCACCTCGTGCCAATGGGGCAATCTTCGCGATGTTTTGGTAGGTTTTCAGATTGGAAACGGAGGGTTCTGTTGGAGTTCGGAACAATATAGGATTCCCTGGGCTGGGTCCGTGTGGAAGTGGGACTCGGCTTGGAGGATCAATATAAACAGTCGTCTGCAAGAGCCATGGATCCAACAAATCCAATCTCAGGAAGCAGAATTCATCGTTCGTCTTCATTGCCTGTGTCGTCGATTCGCTAGAGGTCGATTTATGGCTTCTGCTGGTGGTGGGGGCGAAAAAGGGATCATCACTGGGATGATTACCCGCCCGAAGCTGCCTGAAGGAGCCATGATCTTGCAAACGAATCAGACCCTGGCTTTGTCGGCGGCGGTGTCGAAGGAAGACCAACAGGATAAGGCTGCCCAGGAGAAGATGGCTGACTTGCATCTTGGAGCGGATCCTCAAAACAGTACCAAGCAGGGTCCAATGGCATTCACTGAAGGGGAGATCCACGACGAGGAGGAGGACATCGTCGAGGTGTATATCGACGAGGAAGAGATTAAAAATACAGATAAGTGGACAGTTTTGGCTCGGTTCTATTCCATCAGAACTCCTAACCAAGTGGCTCTCTTTGAGGATATGAGTCGAGCGTGGAGACTCCGTTCAGATATGAATTATAAGTCACTAAGGGATAATCTCTTCATCATTGCCTTCAGCAATGAAGGTGATTTCAAGTTTGTCACTCAAGGAGGTCCATGGCTGCATAGGGGAGATGCCTTACTGGTTGCTGAATTTAATGGGCTGACTAGTCCGTCAAACATCCCATTAGAAGTGGTTCCAATCTGGATTAGAATCTATGATTTACCGTTAGTTCTGATGACAAAAGCTAGAGGTGAACTGTATGGCAGCAAATTCGGTAGGGTTCGGGAGGTTGATGTGGAAGCGGATGGCCGAAACAGACACGATTTCTTCCGTATCAGGGTGGATTTGCCGGTTACAAAACCTCTGAAATCGAAGATAGCTATTAAGATTAATGTGCATGGGAGTGAGGAGATCAAGAGGTTTGATGTCAGATATGAGCGGATTCCATATTTTTGCTTCTTCTGTGGCTTTATTGGGCATTCAGATAAAGATTGCGATAAGAAGGGTGTGAATACTGCTGCTCCGTTCCGTTTTTCTGCTGAACTGCGTTGCTCACCACTGAAGCCTTTCGACAGGAAAGTTAGCAGAGTTAAGGCAACTAATCAATCAGGTGCTTCACGGAGGCTGGTGTTTCGGGGCGCGGGGAGTGCAGGCTCTTCATCATCAAGGAAGGCCCAGGAAGAACAGTGGGATGAGGCTATTCCTCAGAGAGCTGATGATCATGATGGTTTTGAAACAAGAGAAAAGGCAGGGGACGTCACAATAGATGAACAACTTGCACACCAAACAGATAAGTTAAATGTCTCTGAGAGGGCAGTCCAGGAAGGGACAGGTAAAGGGAAGGCTCTGTCAAGCGTGGAGGAAAAAGGCCAAGTTGGCATGGTCATGGCGTTCCAGGGAGAGATGATTCCGGCCATGAAGGATCTGCATCTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCGGAGTCAGTATGTGAGGAGTTAACCAAGTTAACACGGAATTTTTGGTGGGGTGTAGAAAAGGGGAAAAGGAAAACACATTGGAAATCCTGGGAGTGTTTAACTCGGCCGAAGAGCAACGGGGGCCTGGGTTTTAGAGATTTTCGTCTCTTCAACCAAGCACTTCTAGCACGGCAGGCCTGGCGGCTCATTGTTAATCCTGACAGTCTATGTGCAAGGGTACTCAAGGCAAAATATTTTCCAAATGGTTCCCTTGTGGATACAAGTTTTGGAGGAAATGCCTCCCCGGTGTGGAAAGCAATTGAGTATGGGCTGTCACTTCTTAAGGAAGGAATTATATGGAGAATCGGGAATGGGAAGTCAGTGCGCATTTGGAGAGACCCTTGGTTGCCAAGGGATTTTTCCAGACGGCCAATCACACGCAAAGGTAACTGCAGACTAAAATGGGTTTCGGATCTGCTGTCAGAAAATGGTGCCTGGGATGAAACCAGAGTAAACCAGGTGTTTCTACCTGTTGATGCTGAAACAATATGCAGCATCCGGGTCTCTTCACGGCAAGAAGATGACTTTGTAGCATGGCACCCGGATAAACATGGCAAATTTTCAGTAAGGAGCGCATATGGGCTCGCTTGTAACCTTGTTAATATGGAGACCAGTTCCAGTTCTTCTTCCGCTGGATGCAAAAGAATGTGGAATCTTATATGGCAGACCAATGCCCCCCAAAAGGTCAGAATTTTTGCATGGAGAGCAGCCACCAATTGTTTAGCCACAATGGAGAATAAAGCAAAGCGGAAGCTGGAGCAATCTGATATATGTTCAGTGTGTGGTTTAGAAAAGGAAGACACCAGGCATGTGTTGTGCAGATGTCCTCACGCCAGGAACCTATGGGGGGCCATGTGTGAGGCGGGTCATATATCCCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022684

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