BGIOSGA023095

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Revision as of 13:27, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023095| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023095, complete gene.| tag = OsI_233...")
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Gene Name

BGIOSGA023095

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023095, complete gene.

LocusTag

OsI_23382

Ensembl Transcript ID

BGIOSGA023095-TA

Ensembl Protein ID

BGIOSGA023095-PA

Length

5537

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:22263749..22269285

Sequence Coding Region

22263749..22264059,22264140..22265226,22265842..22266064,22266156..22266226,22266312..22266926
,22267038..22267107,22267340..22267615,22267786..22268000,22268094..22268399
,22268620..22268683,22268772..22269011,22269176..22269285

Genome Context

<gbrowseImage1> name=IndicaChromosome06:22263749..22269285 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:22263749..22269285 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGGCCGGAGCGGCGAGAACGGCGGCGCCGGCGGCGGCGACCTGTCGGAGCCTCTGCTCGGCAAGGAGGCGCCTCGCCGGTACTCGGAGCTGTACGGCGCCGGCGTGCTCAGCCGGCTGTCCTTCTCGTGGCTGAACCCGCTGCTCCGCCTCGGCCGCTCCAAGGCGCTCGACCTCGCCGACGTCCCGCTCATCGCCTCCGAGGACGGCGCGGCGCGCGCGTCGGAGAGGTTCGCCGAGGCATGGAGCCTCCACGGCCATGGCAAGGACGGCGGCGGTGGCGGCCGCCTCGTCGGCGTGCTGCTCAGCAGCCACAAGGCAGAGGAGGAGGAGCGCCGGGACCTCGCCGCCGCCGGCGCATCGGCGGCGGTGGCGCTGGTCGGCTCGCTGCTGGCGATCAAGCTCGCCGAGTCGCTGTCGCAGCGGCACTGGTTCTTCAGCTCGCGGCGGACGGGGATGCGCGTCCGGTCGGCGCTGATGGCGGCCGTGTTCCGGAAGCAGCTCCGGCTGTCGGCGCGCGCGCGGCGGCGCCACTCCGCCGGCGAGGTCGTCGGCTACGTCGCCGTCGACGCGTACCGCCTCGGCGACGCCGTCAGCTGGCTCCACACGTCGTGGAGCTCGCCGCTGCAGCTCGCCCTCGCCGTCGCCACCCTCCTCTGGGCGCTCCGCCTCGGCGCGCTCCCGGGCCTCGTGCCCCTCGTCGCCTTCGGCTTCCTCAACGTGCCGTTCGCCAGGGCCCTCCAGGGCTACCAGTCCAGGTTCATGGCGGCGCAGGACGGCCGGCTCCGGTCGACGTCGGAGGCCCTCGCCGGCATGAGGGCCATCAAGCTCCAGTCATGGGAGGGCGCGTTCCGGCGAGCCGTCGAGTCGCGCCTCGGCGGCGAGTTCGCGTGGCTGAGGGAGGCGCAGCTGAAGAAGGCCTACGGCGCCGTGCTCTACTGGGCGGCGCCCACCGTGGTGTCCGCCGTCATGTTCGCCGCCACGGCCGCCGCCGGCAGCGCGCCGCTCGACGCCGGCACGGTGTTCACCGCGCTCGCCGCGCTCAGGGCCATGTCGGAGCCGGTGAGGATGCTGCCGGAGGCCATGACGATGATGATCCAGTACAAGGTGTCGCTGGAACGCATCGGGAGGTTCCTCGCCGAGGAGGAGATCAAACAGGACGACGTGACGAGAGCGGCGACGACGACGACGACGACGAAGAATTCGGATGCGGGAATCATCCATGTCCAGGATGGAAGCTTCAGCTGGAGTGGGAGTGAAGCTGAGCTGACACTGAAGAATGCTCACCTCAGCATTCGCAGAGGGGAGAAGGTGGCAGTTTGTGGCCCGGTTGGCTCAGGGAAATCTTCACTCCTCTGTGCATTGCTTGGGGAGATACCTAGAACATCAGGAATGAGTGGCACTGTTCGCGACAACATCCTCTTCGGGAAGCCCTTCGAGAACTTCGACCATGGAGACCTGACAGAGATCGGCCAGAGAGGAATCAACATGAGCGGTGGTCAGAAGCAGAGGATTCAGCTGGCCAGAGCCGTGTACAGTGATGCAGATGTGTACCTCCTAGATGATCCTTTCAGCGCGGTCGATGCGCACACCGCTGCGGTTCTGTTCTATGTAAGAGCACTTTCAGAGAAGACTGTAGTTCTTGTGACTCACCAGGTTGAATTTCTCACCGAGACTGATCGGATTCTGGTAATGGAAGATGGTTATGTCAAACAACAAGGTGTTTACGCAGAGCTAATGGAATCCGGGACAGCATTTGAGAAGCTTGTCTCAGCTCACAAGTCCTCAATCACAGCATTGGATGATTCCAGCCAGCAAAGCCAAGTCCAGGAGCAAAATGTGACTGATGAAAATACATCAGGACAACCTTCTGCAAAATACATCAGTGATATTGATTCAATCTCTGCAAAAGGCCAACCTTCTGCAACCCAGCTCACAGAAGAGGAAGAAAAGGAGATTGGAGACCTTGGATGGAAGCCATATAAGGACTACATCAATGTGTCCAAGGGAATCACACATCTCTGTGTGATGGGTGTTACTCAGGTGCTCTTCACATCCTTCCAGATGATGGCCACATTCTGGCTGGCAGTGGCTGTCCAGATGAACGTCAGTAGTGCTCTCCTGGTAGGGGCATATTCAGGGCTGTCCATCTTGAGCTGCTGCTTTGCCTATATCAGAACCCTTTATGCAGCTAAGTTGGGGCTCAAGGCCTCCAAAGCATTCTTTACCGGCCTAATGGATTCTGTGTTCAAGGCCCCCATGTCTTTCTTTGATTCAACACCGGTTGGAAGAATCTTGACAAGGGCATCTTCAGATTTAAGCATCCTGGACTTTGACATACCTTACTCCGTGGCTTATGTCGTCGTTGGCGCTACAAGAGATCTAGCAAGAATCAATGGAACAACAAAGGCACCAGTCATGAACTATGCGGCGGAATCAATTCTTGCTGTGGTGACCATCAGGTCTTTTGGGGAAACAGACAGGTTCATCCGCAATAACCTACTTCTTATCGATACCGACGCGACATTGTTCTTCCACACAGTTGCGGCGCAAGAGTGGGTTCTCATAAGAGTAGAAGCACTGCAGAGCCTGACACTACTAACAGCAGCACTGCTCCTTGTTTTGGCTCCTCCAGGAGCAGTCTCACCAGGCTTTGCGGGTCTCAGCCTCTCCTTTGCTTTGTCGCTGACAGCAGTTCAGGTTTTCCTGACAAAGTTCTACTCCTACATGGAAAACTATATTATTTCAGTTGAGAGAATAAAGCAGTATATGCACCTTCCACCAGAGCCTCCAGCCATTATACCAGAGAATAGGGCTCCAAGTTCATGGCCACAGGAGGGACAAATTGACCTGCAAGATCTCAAGGTCAGATACCGCCCAAACATGCCTCTTGTCCTCAAAGGAATCACTTGCACATTTCCTGCTGGAAACAAAATTGGGGTTGTAGGGAGAACGGGAAGTGGGAAATCGACACTCATCAGCTCATTGTTCCGCCTCGTTGATCCTGCGGGTGGGAGGATACTCATTGACAACTTGGATATCAGCTCTATTGGTCTCAAGGATCTAAGAACAAAACTGAGCATTATCCCCCAAGAACCTACACTTTTCAGAGGAACTGTGCGCAACAACTTGGATCCTCTTGGTCTGCATTCCGATGAAGAGATATGGGAGGCCTTGGAGAAGTGTCAACTACAGACAGCCATTCGCAGCACACCTGCTCTTCTTGATACAGTAGTGAGTGATGATGGCAGTAACTGGAGTGTTGGGCAGCGGCAGCTCTTCTGTCTTGGCAGAGTTCTCCTCCGTAGGAACAAGATTCTTGTGTTAGATGAAGCAACGGCATCCATCGACTCCGCAACTGATGCAATCATTCAGAGGGTCATCAGGCAGCAATTCTCAAGTTGCACTGTGGTAACTATCGCTCACAGGGTTCCAACTGTAACAGACAGTGACAAGGTCATGGTACTTTCATATGGGAAGCTTATAGAATATGACACGCCCGCCAAGTTGTTGGAAGATAAACAAACAGCCTTTGCTAAACTTGTGGCTGAATATTGGGCTAATTCCAAGCGGAATGCAACATGA</cdnaseq>

Protein Sequence

<aaseq>MAGRSGENGGAGGGDLSEPLLGKEAPRRYSELYGAGVLSRLSFSWLNPLLRLGRSKALDLADVPLIASEDGAARASERFAEAWSLHGHGKDGGGGGRLVGVLLSSHKAEEEERRDLAAAGASAAVALVGSLLAIKLAESLSQRHWFFSSRRTGMRVRSALMAAVFRKQLRLSARARRRHSAGEVVGYVAVDAYRLGDAVSWLHTSWSSPLQLALAVATLLWALRLGALPGLVPLVAFGFLNVPFARALQGYQSRFMAAQDGRLRSTSEALAGMRAIKLQSWEGAFRRAVESRLGGEFAWLREAQLKKAYGAVLYWAAPTVVSAVMFAATAAAGSAPLDAGTVFTALAALRAMSEPVRMLPEAMTMMIQYKVSLERIGRFLAEEEIKQDDVTRAATTTTTTKNSDAGIIHVQDGSFSWSGSEAELTLKNAHLSIRRGEKVAVCGPVGSGKSSLLCALLGEIPRTSGMSGTVRDNILFGKPFENFDHGDLTEIGQRGINMSGGQKQRIQLARAVYSDADVYLLDDPFSAVDAHTAAVLFYVRALSEKTVVLVTHQVEFLTETDRILVMEDGYVKQQGVYAELMESGTAFEKLVSAHKSSITALDDSSQQSQVQEQNVTDENTSGQPSAKYISDIDSISAKGQPSATQLTEEEEKEIGDLGWKPYKDYINVSKGITHLCVMGVTQVLFTSFQMMATFWLAVAVQMNVSSALLVGAYSGLSILSCCFAYIRTLYAAKLGLKASKAFFTGLMDSVFKAPMSFFDSTPVGRILTRASSDLSILDFDIPYSVAYVVVGATRDLARINGTTKAPVMNYAAESILAVVTIRSFGETDRFIRNNLLLIDTDATLFFHTVAAQEWVLIRVEALQSLTLLTAALLLVLAPPGAVSPGFAGLSLSFALSLTAVQVFLTKFYSYMENYIISVERIKQYMHLPPEPPAIIPENRAPSSWPQEGQIDLQDLKVRYRPNMPLVLKGITCTFPAGNKIGVVGRTGSGKSTLISSLFRLVDPAGGRILIDNLDISSIGLKDLRTKLSIIPQEPTLFRGTVRNNLDPLGLHSDEEIWEALEKCQLQTAIRSTPALLDTVVSDDGSNWSVGQRQLFCLGRVLLRRNKILVLDEATASIDSATDAIIQRVIRQQFSSCTVVTIAHRVPTVTDSDKVMVLSYGKLIEYDTPAKLLEDKQTAFAKLVAEYWANSKRNAT</aaseq>

Gene Sequence

<dnaseqindica>1..311#392..1478#2094..2316#2408..2478#2564..3178#3290..3359#3592..3867#4038..4252#4346..4651#4872..4935#5024..5263#5428..5537#ATGGCCGGCCGGAGCGGCGAGAACGGCGGCGCCGGCGGCGGCGACCTGTCGGAGCCTCTGCTCGGCAAGGAGGCGCCTCGCCGGTACTCGGAGCTGTACGGCGCCGGCGTGCTCAGCCGGCTGTCCTTCTCGTGGCTGAACCCGCTGCTCCGCCTCGGCCGCTCCAAGGCGCTCGACCTCGCCGACGTCCCGCTCATCGCCTCCGAGGACGGCGCGGCGCGCGCGTCGGAGAGGTTCGCCGAGGCATGGAGCCTCCACGGCCATGGCAAGGACGGCGGCGGTGGCGGCCGCCTCGTCGGCGTGCTGCTCAGGTGCTTCCTCGGGGAGATCATGCTCACCGGCTTCTACGCGCTCGTCAAGACGCTGGCCATCGCCGTGTCGTCCGGTACAGCAGCCACAAGGCAGAGGAGGAGGAGCGCCGGGACCTCGCCGCCGCCGGCGCATCGGCGGCGGTGGCGCTGGTCGGCTCGCTGCTGGCGATCAAGCTCGCCGAGTCGCTGTCGCAGCGGCACTGGTTCTTCAGCTCGCGGCGGACGGGGATGCGCGTCCGGTCGGCGCTGATGGCGGCCGTGTTCCGGAAGCAGCTCCGGCTGTCGGCGCGCGCGCGGCGGCGCCACTCCGCCGGCGAGGTCGTCGGCTACGTCGCCGTCGACGCGTACCGCCTCGGCGACGCCGTCAGCTGGCTCCACACGTCGTGGAGCTCGCCGCTGCAGCTCGCCCTCGCCGTCGCCACCCTCCTCTGGGCGCTCCGCCTCGGCGCGCTCCCGGGCCTCGTGCCCCTCGTCGCCTTCGGCTTCCTCAACGTGCCGTTCGCCAGGGCCCTCCAGGGCTACCAGTCCAGGTTCATGGCGGCGCAGGACGGCCGGCTCCGGTCGACGTCGGAGGCCCTCGCCGGCATGAGGGCCATCAAGCTCCAGTCATGGGAGGGCGCGTTCCGGCGAGCCGTCGAGTCGCGCCTCGGCGGCGAGTTCGCGTGGCTGAGGGAGGCGCAGCTGAAGAAGGCCTACGGCGCCGTGCTCTACTGGGCGGCGCCCACCGTGGTGTCCGCCGTCATGTTCGCCGCCACGGCCGCCGCCGGCAGCGCGCCGCTCGACGCCGGCACGGTGTTCACCGCGCTCGCCGCGCTCAGGGCCATGTCGGAGCCGGTGAGGATGCTGCCGGAGGCCATGACGATGATGATCCAGTACAAGGTGTCGCTGGAACGCATCGGGAGGTTCCTCGCCGAGGAGGAGATCAAACAGGACGACGTGACGAGAGCGGCGACGACGACGACGACGACGAAGAATTCGGATGCGGGAATCATCCATGTCCAGGATGGAAGCTTCAGCTGGAGTGGGAGTGAAGCTGAGCTGACACTGAAGAATGCTCACCTCAGCATTCGCAGAGGGGAGAAGGTGGCAGTTTGTGGCCCGGTTGGCTCAGGGAAATCTTCACTCCTCTGTGCATTGCTTGGGGAGATACCTAGAACATCAGGAATGGTAAGTGATAGAAAAAATGAGATGAATTTTGAAGAAAAAAGAACAGCTTTTCGCATACAGATTGAATCATCATGTTCTTTAGTTTTGTAATCCAAGTAGTTCATAGCAAATTCAGAAAAAAAAAATGATGTGTCCTCTTTCCTTTCACAAACATACAAAATCAAATCCCATCTTCATATATAGATTTTTTTTTCTTCAAAATTAAGTAAAACTTTACATCCAATTTTGACTTCAAAAAGAAAATATTTTCCTTTTGTAATCCAAGTTTGAATTTAGTTTGACTGATGACATTATAATCTAGTATTTAAAATCTGTTCATAATTTCTCATAATTATTTAGATTTCATGCAAAAACAATAGGGCATTATCACTAAAAACTTTCTACTTTCCCCTGAAAAAAGACTCAAGATAATCTTCGACTCTATATTTATCTCCTTTCTTTTCATTTTACCATGAAAGGAGAAAACACAAGATTGTCTTGTCATGTTCATATACAAAAAAAAAATGACAATGACAAATCTATGTTTTCTAAAATATGAACATGACAAAACTACAATCAATTTTCAGGTGGAGTTGTATGGCACAGTGGCGTATGTTTCCCAGAACTCATGGATAGAGTGGCACTGTTCGCGACAACATCCTCTTCGGGAAGCCCTTCGAGAACTTCGACCATGGAGACCTGACAGAGATCGGCCAGAGAGGAATCAACATGAGCGGTGGTCAGAAGCAGAGGATTCAGCTGGCCAGAGCCGTGTACAGTGATGCAGATGTGTACCTCCTAGATGATCCTTTCAGCGCGGTCGATGCGCACACCGCTGCGGTTCTGTTCTATGTAAGAGGTGCTCCTTGACCTGCATCCATGGATGCACTCCCTGATGAAAAAAAAGTTCTAATCAGTGGCAATGTTCTTGCTGGATTGTGTAATGACAGCACTTTCAGAGAAGACTGTAGTTCTTGTGACTCACCAGGTTGAATTTCTCACCGAGACTGATCGGATTCTGGTAAGTTGATCTTCAGACTATCATTTAGCCATATCAAAGGGTATCAAAGATCCTTCAGATGAATGATCTGCCATTGTTTCAACAGGTAATGGAAGATGGTTATGTCAAACAACAAGGTGTTTACGCAGAGCTAATGGAATCCGGGACAGCATTTGAGAAGCTTGTCTCAGCTCACAAGTCCTCAATCACAGCATTGGATGATTCCAGCCAGCAAAGCCAAGTCCAGGAGCAAAATGTGACTGATGAAAATACATCAGGACAACCTTCTGCAAAATACATCAGTGATATTGATTCAATCTCTGCAAAAGGCCAACCTTCTGCAACCCAGCTCACAGAAGAGGAAGAAAAGGAGATTGGAGACCTTGGATGGAAGCCATATAAGGACTACATCAATGTGTCCAAGGGAATCACACATCTCTGTGTGATGGGTGTTACTCAGGTGCTCTTCACATCCTTCCAGATGATGGCCACATTCTGGCTGGCAGTGGCTGTCCAGATGAACGTCAGTAGTGCTCTCCTGGTAGGGGCATATTCAGGGCTGTCCATCTTGAGCTGCTGCTTTGCCTATATCAGAACCCTTTATGCAGCTAAGTTGGGGCTCAAGGCCTCCAAAGCATTCTTTACCGGCCTAATGGATTCTGTGTTCAAGGCCCCCATGTCTTTCTTTGATTCAACACCGGTTGGAAGAATCTTGACAAGGGTATGGACTTCAAAATAAGATCATAAGAGCTAACCTTTAGATTCTCCATGAACAATTATTATAGGTCAAGTGGTTGCTAGTACCTGACTGTAGCCCTTTTATTCTCTGCAGGCATCTTCAGATTTAAGCATCCTGGACTTTGACATACCTTACTCCGTGGCTTATGTCGTCGTTGGCGCTAGTGAGCTCATCACAACAATACTGGTTACAGGGGCTGTAACTTGGCAAGTTCTAATTGTAGCAATCCCAGTTACAATTACTGTGGCATATGTTCAGGTCAGTCCCCTAATTGCTGCAAACAACTACCATCGTTAATTAAACCAGTAGATGAATAAATAGATCAAATGTTACCTTCTGAACTCAAGATCTCACGTTTGTTTTAAAACCTTTGACGAGGCACTACGTGGCCTCAGCAAGAGATCTAGCAAGAATCAATGGAACAACAAAGGCACCAGTCATGAACTATGCGGCGGAATCAATTCTTGCTGTGGTGACCATCAGGTCTTTTGGGGAAACAGACAGGTTCATCCGCAATAACCTACTTCTTATCGATACCGACGCGACATTGTTCTTCCACACAGTTGCGGCGCAAGAGTGGGTTCTCATAAGAGTAGAAGCACTGCAGAGCCTGACACTACTAACAGCAGCACTGCTCCTTGTTTTGGCTCCTCCAGGAGCAGTCTCACCAGGTATGTATGTACATAAGCCATTACACCTTAACATGTTCATCTTACAATGGTATTTTCAGTATGCTGAACAATGAACGCTTCCAGTTTTTTTTTTTAGATAATGGATTAATTAAAACCCGGCCTCTACATCCAACAAGGATGTATAACACTTCCAATGTTAACTTTTCCAGGCTTTGCGGGTCTCAGCCTCTCCTTTGCTTTGTCGCTGACAGCAGTTCAGGTTTTCCTGACAAAGTTCTACTCCTACATGGAAAACTATATTATTTCAGTTGAGAGAATAAAGCAGTATATGCACCTTCCACCAGAGCCTCCAGCCATTATACCAGAGAATAGGGCTCCAAGTTCATGGCCACAGGAGGGACAAATTGACCTGCAAGATCTCAAGGTAAAACTACAGTAAGTTGCTTTCAATAGAGAAGGCCACAGAACATTTTTAAAAAATGTTTGCAGTAACTTACACACTTATACTTATGAGCAGGTCAGATACCGCCCAAACATGCCTCTTGTCCTCAAAGGAATCACTTGCACATTTCCTGCTGGAAACAAAATTGGGGTTGTAGGGAGAACGGGAAGTGGGAAATCGACACTCATCAGCTCATTGTTCCGCCTCGTTGATCCTGCGGGTGGGAGGATACTCATTGACAACTTGGATATCAGCTCTATTGGTCTCAAGGATCTAAGAACAAAACTGAGCATTATCCCCCAAGAACCTACACTTTTCAGAGGAACTGTGCGCAACAACTTGGATCCTCTTGGTCTGCATTCCGATGAAGAGATATGGGAGGTAAGAAAAATTACATTTGTGCAAAACTCAGATATAAGACGTGATAAAAATCTTACACAATAGTGCGGTTTCTAATAGAATCACTTTACAAAAATCTTCTCAAAACATAAGCAATAGAAGAACTTGAGCTCAATCATGATCCTGAACTTAACCAGACTGGTACCTTTGTTTAGACCAAAATGGTTTCATGAATTGATTAAACTAACACTGAACGTTTCAGGCCTTGGAGAAGTGTCAACTACAGACAGCCATTCGCAGCACACCTGCTCTTCTTGATACAGTAGGTAAGTGACATCAATTTCAGAGGAAAAAAGTTACCATGCAAAATATTTTTAGAAATCTCAAACAATTTGTTCATTTGGCCAATTGTAGTGAGTGATGATGGCAGTAACTGGAGTGTTGGGCAGCGGCAGCTCTTCTGTCTTGGCAGAGTTCTCCTCCGTAGGAACAAGATTCTTGTGTTAGATGAAGCAACGGCATCCATCGACTCCGCAACTGATGCAATCATTCAGAGGGTCATCAGGCAGCAATTCTCAAGTTGCACTGTGGTAACTATCGCTCACAGGGTTCCAACTGTAACAGACAGTGACAAGGTCATGGTACTTTCATATGGTAAGTTACTACACACACGCATATCAATCTGAATATCTGAGGAAGGTTCTGGTCCAGTCATCGCTCATCCGAACCTTCCTCTGATGGCCCTGTCATCCAAACTGCACATATATAAACTGCACATATTTGGATGATTCAAGCTGATGGCCCTTCTGTTTGTGCAGGGAAGCTTATAGAATATGACACGCCCGCCAAGTTGTTGGAAGATAAACAAACAGCCTTTGCTAAACTTGTGGCTGAATATTGGGCTAATTCCAAGCGGAATGCAACATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023095

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