BGIOSGA023232

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Revision as of 13:29, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023232| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023232, complete gene.| tag = OsI_236...")
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Gene Name

BGIOSGA023232

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023232, complete gene.

LocusTag

OsI_23641

Ensembl Transcript ID

BGIOSGA023232-TA

Ensembl Protein ID

BGIOSGA023232-PA

Length

4354

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:25050931..25055284

Sequence Coding Region

25050931..25051203,25052424..25052579,25053145..25053213,25053333..25053503,25054211..25054354
,25054669..25054830,25054931..25054996,25055090..25055149,25055240..25055284

Genome Context

<gbrowseImage1> name=IndicaChromosome06:25050931..25055284 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:25050931..25055284 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGTAGGAGGAAGAGGAGGACGAGCGAAGGCGGAGGTCATAATCAGCGTGGAGGTGGTCGTCGGAGTGGACCCTGTAGGCCTGTACGCGTTGGAGGCGAGGCGAAAGTGGCGCGCATGGCTGCGTCGGGGGAGTGGGCGTGGCGGTCCGGGTGGTCATGGAGTGCACCGCGGCAGAAGGTGGCCTTCACCTCGGCCGTGGTGGCGTCCCGCCGCAGCCCCAACGTTTGGTAGTGGTCGCTGCCCATTGCTGGCGCCTATCACCGAAGGGATGGAAGACATGGAGATGGATGGCTCGTTTGAATCATTGGCTGTGGAGTTGATCGCTCAAGGAGTCATTGGGAAAAGAGTTGATGAGATGGAATCTGGCTTTCTAATGGCACTTGATTACATGATACAGCTTGCTGAGAAGGATAGTGACAATGAGCGTAAATCTCTCCTTGAGGTAGTCAAGCAGACAGTGCTGGATCATCTCACAAAAAAATGCCCTCCACATGTTCAAGTGGTTGGACTTCTTTGCCAGACTGAAAAGAAGGATAGCAGACATGAATTACTGCGTCGTGTAGCTGCTGGTGGAGGTGTGTTTAAAAATGATAAAGGCCTTAAGTGCCAGATTCCAGGGGCCAATCTTAATGATATTGCGAACCAGGCAGATGATCTCTTGGAGTCAATGGAATCAAGGCCCACAATTCCTGATCGAAAACTTCTCGCTAGACTAGTTATCGTAAGAGAGGAGGCTCGAAATATGATGGGAGGTGGCCTGTTAGATGAAAGAAATGACCGTGGTTTCACAACGCTTCCTGAGGCAGAGGTGAACTTCTTGAGCAAGCTGGTTGCTCTCAAACCTGGGAAAGCATTGGAGAGGATGATCAAGGATGTTATGCAGGGCAAGGCAGAAGGTGCTGATAACATTGAAAATGCAAATGCTGGACCAGATTCTAAGCTTGATCATCTAACTGGGATATCTGGAAGGGGAAGTGTGACAGGCCTCAAGCCACGGCCAGTCCGTCCAGGAATGTTCCTTGAGACGGTTTCTAAGGTTCTAGGTGGTATATATGCAAACAACACATCTGGCATTACAGCACAACATCTAGAATGGGTACATCAAACAACACTGAAGATTCTTCAGGAAATGGCCTTCTAA</cdnaseq>

Protein Sequence

<aaseq>MAVGGRGGRAKAEVIISVEVVVGVDPVGLYALEARRKWRAWLRRGSGRGGPGGHGVHRGRRWPSPRPWWRPAAAPTFGSGRCPLLAPITEGMEDMEMDGSFESLAVELIAQGVIGKRVDEMESGFLMALDYMIQLAEKDSDNERKSLLEVVKQTVLDHLTKKCPPHVQVVGLLCQTEKKDSRHELLRRVAAGGGVFKNDKGLKCQIPGANLNDIANQADDLLESMESRPTIPDRKLLARLVIVREEARNMMGGGLLDERNDRGFTTLPEAEVNFLSKLVALKPGKALERMIKDVMQGKAEGADNIENANAGPDSKLDHLTGISGRGSVTGLKPRPVRPGMFLETVSKVLGGIYANNTSGITAQHLEWVHQTTLKILQEMAF</aaseq>

Gene Sequence

<dnaseqindica>1..273#1494..1649#2215..2283#2403..2573#3281..3424#3739..3900#4001..4066#4160..4219#4310..4354#ATGGCTGTAGGAGGAAGAGGAGGACGAGCGAAGGCGGAGGTCATAATCAGCGTGGAGGTGGTCGTCGGAGTGGACCCTGTAGGCCTGTACGCGTTGGAGGCGAGGCGAAAGTGGCGCGCATGGCTGCGTCGGGGGAGTGGGCGTGGCGGTCCGGGTGGTCATGGAGTGCACCGCGGCAGAAGGTGGCCTTCACCTCGGCCGTGGTGGCGTCCCGCCGCAGCCCCAACGTTTGGTAGTGGTCGCTGCCCATTGCTGGCGCCTATCACCGAAGGGGTATTTTGGTCAGACCAATGGCTGAAAATGGTGGAAATCCTATGAAATGGCGAATATGGCAAAGCGGCGGTCATGGTTTTAAAAGCGTCGCTTAAGCGTTGCCTAGGCGTCTGAGCGCCATCAGGGAGCAGAGCGTCCCCACTGCCTACCCTTCTACACGTCTTGGATCCTAATATCTCGTGAAATCAGGTAGACACGGGCAAGGTGGGGGTCAAGGGCGCATGCGCTGTAGGGAATTACACATGCTGGGAAGGAAATCGCGTGAAGATATGATGGAAATCGCGTGTGCAGCAATTTAGGGAGGGAAGAGTGAAAGATGGAAAGAGAATAGAGAATAGGGGTGCGCCAATTTAGGGAGAGGGAAGGGTGAAAGATGGAAAGCGAATAGATAATAGGGTGGGCAGAGATTGGAAAGAGAAGATGGTTGTCTCCCTCTTGCTGCTCCCTTCTTCTCCAATGGATCTGTCTCCCTGCTCTTCCTCGCCCCTTCATGTTCTTCCTCTCTTTTTTGCCTCATATATCTCTAGTATGCCTCTTGTGCTTGTGTTTAAGGCGTCGCCTTACCCTTGCCTTAAACTCTTAAGGCGTTGCCTAGGCAATTGAGTAGGGGTGGGTCGCCTTGCCTCGCCTTGTCGCCTTAAGTACACTGGCGGCGGTTTAGCATCGGTTGGAAGTGGCTTTTTACGAATCCAATCCGTAAGTGCATTTGAGCGAAATCCTCTTTTAGCAGTGGCAGAATGTCCAATTTCTCACTATTTGAATTGTGGGTAGTAACTGTCTCGGTTGACAAAATTCTGGGATATTTTAGCTCTCGGTGGTTAATAGATTGGGTGTTTTATTTTCAGTTCTTTGGTGATTAAATACTTTATTGTTTTATTATCCTCTGGTGGGTAGTATATTACAGCGTTTCACGACGAATTGGCCAATAGTTCCCTCGGGAAAAAAAATAATTGGCCATTTGGAAAAAAATAATACATCCTTTGCTGCATCTTTTCACACTTTCTCAAGGTTAGAAGATTATGGATTTTTATTAAATTTTCGAACAACCAGGAATGAAGCAATCTTCAATGATGAATTAGAGAACCTTGGTATGCGATGTGGAATAGCAAGGTTCATGATGCAGCTGAATTATAAGGATTGCTACCTTTGAGGGTCTTAAAGTTGTAAACATTGTATTGTATATTCTTGATATGGGACTATGTATGCTGATGATGCTGTAGATGGAAGACATGGAGATGGATGGCTCGTTTGAATCATTGGCTGTGGAGTTGATCGCTCAAGGAGTCATTGGGAAAAGAGTTGATGAGATGGAATCTGGCTTTCTAATGGCACTTGATTACATGATACAGCTTGCTGAGAAGGATAGTGACAATGAGGTACTGGAAAAACTAATTTCACATTTTGCCAAAATTGATGTCAACTCATTCATAATTTTCAAAGGATGAATATGTTAACTGCTCTCCTAGCTTTGTTGATTGCGATATAAATGTTTATATAATCTAATATACCTAGACGTCTGTCTAGTTATAATTGGTATTTGATCATAATGCTCTAGCCCATACTGGTATCTATTTCCTCGTGTTAAAATTGGTTGGTAGAAGTGTAAGCAAAATCTTCGTGAATATTCCCTTGAGAGTGCATTATAGCAACATAATAACTGTGAAGTGCTTATCTGTGTCCACTCGTTGTAAGTGGGTTTAGGGCCCTAAACAATCTGTATATGCTGATTGAATTGCTCATTATTTAAGACATTAAATTCTGGTAAACATCCTTGAAATATGCATTATGGCAACAAGATAATGACTCAAATAACCCATATATGGATGCATGCTTATTTGACCAGATTAATTAATAATTATTCTCATATCATATCTCTTGAGTCTTGACCTGTTTTCCATGCTTTGTCTATTGGCCTTACACATCAGTTTTTTTAACTGGCAGCGTAAATCTCTCCTTGAGGTAGTCAAGCAGACAGTGCTGGATCATCTCACAAAAAAATGCCCTCCACATGTAAGTCTTATTTCTAGTGCAGCAAACTTACCTTTGTGGGAATGTCAAACCTGTATTTGTACTTCTTTAGTCATAAATGCTCTTTGACCGGTCTACCCATTTTATGATGTATAAACCAGGTTCAAGTGGTTGGACTTCTTTGCCAGACTGAAAAGAAGGATAGCAGACATGAATTACTGCGTCGTGTAGCTGCTGGTGGAGGTGTGTTTAAAAATGATAAAGGCCTTAAGTGCCAGATTCCAGGGGCCAATCTTAATGATATTGCGAACCAGGCAGATGATCTCTTGGAGGTAAGATGAAGGGTATTAGTACAATTGTGTATACTAATGATCTTACATGATGCTCTGGGATTCTACATGACTTGTTCATTTCAGAGTAACAAAAATTGCATTGGTGGTGCTAAAACTTGTCTGTGGTGGTTGCATTTTAGTCACTGCTCTTGAAGATGCACAATTTTGTTAGTGGAAATAGATCAAGTCTGTAAGCAAACATGGATAACCGGACAGTTTTATAATGCCATGTGAGCACAGGGAACATTTGAATATATTGGCCACAAGGATATATGTATTTTTTTCGCTAATTTTCGTGGATCTACCTCAGTTCCATTTGGGAATTTCACCGTTTTATTTGGATGGTTGTGCTTGACTTTGGTTTGTTGAACATTGTTATAATTGTTGCAGATTTAGTTGCATCATTAATCCATTAATGCAATGGTATCTCGGATACCTCAAACAGTTGTACAATGCAATGAAAGTTTTTCTTCCCTTCAAGAGAGAACTAATGTTCTAAAGCTTTTCATTACTCATAGGTACATATCATCCTATCATTTGCCTCATTGTTGCTCTGCAGCTTCTGTAATCTTTTTCCGTGATGTGCACATTAGCCTTTTCTGCATAGTCATGGGCATGGTCATGAACAGTTGCCAATAATTCTGCTGGACCATGGAACATTAATTGTCACTAGATTATTCTGGCTTACCTTTTATTAATTATTGCAGTCAATGGAATCAAGGCCCACAATTCCTGATCGAAAACTTCTCGCTAGACTAGTTATCGTAAGAGAGGAGGCTCGAAATATGATGGGAGGTGGCCTGTTAGATGAAAGAAATGACCGTGGTTTCACAACGCTTCCTGAGGCAGAGGTATTATTTGCACTTGTTGGGGCTTGGGACACGGGGAATTACATTCTTAGAATCTCTACCCATCTAGTTCTATACATAGAATATCTTTTTTACTAACATTTATAAGTACCAAAGGTTAGTTCCTTTTGGCCTTAATCATCTGACATAAGAAAGGACATTGTTATATTTTCATATTCATTGCATATTCATGTAACTATGACACCATTCAGTGATCTGTGAAGCCATAATATTTAAAACTGTGTACTAACTATAAATCAGTGATGCACAGTTATTGAATCGAAGTTTTTTTTCAATATCATGAGCTGAATGAACAGGTGAACTTCTTGAGCAAGCTGGTTGCTCTCAAACCTGGGAAAGCATTGGAGAGGATGATCAAGGATGTTATGCAGGGCAAGGCAGAAGGTGCTGATAACATTGAAAATGCAAATGCTGGACCAGATTCTAAGCTTGATCATCTAACTGGGATATCTGGAAGGGTAAGCTTTGGATTCAAAACATGGATTGTTGTTATCTTCAGATACCAATATATTTTGCATTACATAGATTGTTTGACTGCACTTGTTTCCATGGACACAGGGAAGTGTGACAGGCCTCAAGCCACGGCCAGTCCGTCCAGGAATGTTCCTTGAGACGGTTTCTAAGGTATTGTGATAATATGGATAAAACTCACTGTCTTAAATGAACATGCTTACTCCTTTGAAGTGTGTGGTTTAATTATTTTCAATGGGTGGTAAGGTTCTAGGTGGTATATATGCAAACAACACATCTGGCATTACAGCACAACATCTAGAATGGGTGAGATACCTGCTTCGTTCTTTTCAATGGTTATGTCCACTTGTCTGGAAAGGGGAAAATCATGCGGATTGCCTTATTTTCCCGTTGTAGGTACATCAAACAACACTGAAGATTCTTCAGGAAATGGCCTTCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023232