BGIOSGA023240

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Revision as of 13:29, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023240| Description = BGIOSGA023240| Definition = Oryza sativa Indica Group BGIOSGA023240, complete gene.| tag = | tid = BGIOSGA023240-TA|...")
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Gene Name

BGIOSGA023240

Description

BGIOSGA023240

Definition

Oryza sativa Indica Group BGIOSGA023240, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA023240-TA

Ensembl Protein ID

BGIOSGA023240-PA

Length

3530

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:25228973..25232502

Sequence Coding Region

25228973..25229131,25229812..25230095,25231183..25231338,25232160..25232502

Genome Context

<gbrowseImage1> name=IndicaChromosome06:25228973..25232502 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:25228973..25232502 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGATGGAGATCAGCAGCAATGAGGAGATGATGGAGATGGCCATTGTTGAGCAGCTGCCTCCTTCCTCTCATCATCTCAATGGTGGCAGTGTTGAGGTTGACATGGAGGAGGATCATGTGTGGCCAACCAAAGATGGCCCTCTCCCTATATTCCTTAAGTTCGAGAATGTGGAGTACAAGGTGAAGCTGACTCCAAAGAACCCACTAACAGCTGCAAGGGTGGCATTTGCATCTCACAAGAGCACTGAGGATCAGGGCAGCTGCAAGCACATCCTCAAGGGGATAGGAGGCAGTGTTGACCCTGGTGAGATCCTGGCACTGATGGGCCCATCTGGCAGTGGCAAGACCACGCTGCTCAAGATACTTGGAGGCAGGCTCAGTGGTGGTGTCAAGGGCCAGATCACCTACAATGACACCACCTACAGTCCCTGCCTCAAAAGAAGGATTGGATTTGTGACACAGGACGACGTCCTTTTCCCTCAGTTGACAGTGGAGGAGACCCTTGTGTTCGCTGCCTTCTTGAGACTCCCCGCTCGCATGTCAAAGCAGCAGAAGCGCGACAGAGTTGACGCCATCATAACTGAGCTAAATCTAGAGAGGTGCCGGCACACCAAGATCGGCGGCGCGTTCGTGCGCGGCGTGTCGGGCGGCGAGAGGAAGCGGACGAGCATCGGGTACGAGATCCTCGTCGACCCGTCGCTGCTGCTCCTCGACGAGCCCACCTCGGGCCTCGACTCCACGTCGGCGGCGAAGCTCCTCGTCGTGCTCCGCCGCCTCGCCAGGTCGGCGGCCCGCCGGACGGTGATCACCACCATCCACCAGCCCTCCAGCCGGATGTTCCACATGTTCGACAAGCTGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACACAGTTCTGATTTTCAAAGAAAAAAAGTAA</cdnaseq>

Protein Sequence

<aaseq>MMEISSNEEMMEMAIVEQLPPSSHHLNGGSVEVDMEEDHVWPTKDGPLPIFLKFENVEYKVKLTPKNPLTAARVAFASHKSTEDQGSCKHILKGIGGSVDPGEILALMGPSGSGKTTLLKILGGRLSGGVKGQITYNDTTYSPCLKRRIGFVTQDDVLFPQLTVEETLVFAAFLRLPARMSKQQKRDRVDAIITELNLERCRHTKIGGAFVRGVSGGERKRTSIGYEILVDPSLLLLDEPTSGLDSTSAAKLLVVLRRLARSAARRTVITTIHQPSSRMFHMFDKLXXXXXXXXXXXXXXXXXHTVLIFKEKK</aaseq>

Gene Sequence

<dnaseqindica>1..159#840..1123#2211..2366#3188..3530#ATGATGGAGATCAGCAGCAATGAGGAGATGATGGAGATGGCCATTGTTGAGCAGCTGCCTCCTTCCTCTCATCATCTCAATGGTGGCAGTGTTGAGGTTGACATGGAGGAGGATCATGTGTGGCCAACCAAAGATGGCCCTCTCCCTATATTCCTTAAGGTGTGTATATCTATCTCTTCTTCCATTTTTCGGTATGCGCGAAAACAGATCAAGTTTATCCTTGTTGATGTTCAAGAAAGTGTTTTAATCCCTCGTTTATGGTTATGAAAAATTATGAAAACAATAAATAGATTATCCCTATAAGCTTTTATAGGTAAGTGGATACATATGTGCATGTTTGTAGGTATGTGAAAAGATTAATCAGAATGCTTACACATGTTGATGTTCTCCCTATGTAGTGTGTGTATATATGTGCATGTTTGATGTTTGTAGCAACTGAACAATTTAGTTCTACTAAGCAGAGTTTGAAAAAGATCGATATTACTACCAGGATTTATTAAGATACTAAAGGTTTTACCGTGATTAATCATGAAATCATGAAAAAAAGTTTGTATTAATTATTTCTTATGCATTTTATAGAGTCTAATTTTGAACTCAGAGATGCAAAAAATGCCAAACAAAGGAAACGACCTGAAATAGACATACTTAAGGAGGGAAGGTACAAGTTAGTTGGTTGGCAATCTGCATGTCTCATTGCTCAACAGTTTCTTATCTAATTGCAAAAACTTCTTGCATGGTGTTTTTACTTCTTTGGCATGCAATATAGCTAACAAAAAAGGAGCAAATTCCTGGTCTAAATTTTTGCTTGATATATAAATATTTTTTTTTGGAAAGTGCAGTTCGAGAATGTGGAGTACAAGGTGAAGCTGACTCCAAAGAACCCACTAACAGCTGCAAGGGTGGCATTTGCATCTCACAAGAGCACTGAGGATCAGGGCAGCTGCAAGCACATCCTCAAGGGGATAGGAGGCAGTGTTGACCCTGGTGAGATCCTGGCACTGATGGGCCCATCTGGCAGTGGCAAGACCACGCTGCTCAAGATACTTGGAGGCAGGCTCAGTGGTGGTGTCAAGGGCCAGATCACCTACAATGACACCACCTACAGTCCCTGCCTCAAAAGAAGGTATTCCCTCTATTTCATATTATAATTCGTTTTGACTTTTTCTTATTTAAACATTATTAAGTTTAACTAAGTTTATAAAAATAGCAATGTTTTAAACACCAAATTAGTTTCATTAAATTTAGCATCGAATATATTTTGATAATATGTTTGTTTAATTCTTTTGTGTTAAAAATATTACTATATTTTTCTATAAACTTACTTAAACGTAAAGAAATTTAACTAGAAAAAAAAGTTAAAATGACTTATAATATGAAATAGAGAGAGTAACTGTATAAAGTCATAGTGGATATTAATTAGTAAGATTTATGTAATGAGAAAGGTCCGGGGTCTTCCGACTAGCACGATAAGGTGTGGGTTAGTTGATCAAGTTCAAGCCTCATCTCTCTTAATAAATTTTGATATAAAAGTTATTTCTCTCATATCTAGTGTTTTTTTTTATTTATGGTAGTTATTGTAAGACCATAAGGTATGGGTTAGGCCCTGTTTAGTTCCCCAAAAACTTTTCAAAAAAACATCACATCAAATCTTTAGACACATGTATGGAGCATTAAATATAGATAAAAATAAAAACTAATTACACAGTTTGCATGTAAATCGCGAGACGAATCTTTTGAGCCTAATTAGCCCATGATTAGCCATAAGTGTTATAGTAACTCACATGTACTAATGCCGGCTTAATTAGGCTCAAAACATTCGTCTCGCGGTTTGGCGAGTTATGAAATTAGTTTATTCATTCGTGTCCGAAAACCCCTTCCGACATCCGGTCAAACGTCCGATGTGACACCCAAAAATTTTCATTTCACCAACTAAATAGGCCCTTAGTTATTGTAAGATAGAATTTTTGCATAGTTATGCTATCTTTCGTAAACTAGTGGAGTAGATTGAGTAAAACCAGGATGTCTTCAAAGAGAATTTACAGGCACGCAAATGACTGACAAACTGCTTAGTGTTTACTGCAATCTTCAGATAAGAGAGAACATGTATTGGCATGCCAAATTAAGCAGTGTAGTTGCATTGTTCTGCAGGTATCAATTAAAGTGGAAAAATTAAGTAATCAAGACTAATTATTTTCTTTTGATGAAAACAGGATTGGATTTGTGACACAGGACGACGTCCTTTTCCCTCAGTTGACAGTGGAGGAGACCCTTGTGTTCGCTGCCTTCTTGAGACTCCCCGCTCGCATGTCAAAGCAGCAGAAGCGCGACAGAGTTGACGCCATCATAACTGAGCTAAATCTAGAGAGGTCTGTAAGTATATTTTCATCAAAGGAAAAAAAAAACTACACCGATTTTACTAATATAAGTTGTCAAACCAACAATCTGCAGCTTAACACAAACCCACGTGAAGCAAAATAGCATACAAAATAAAATCATGACTAATAGCATAAATCTGTTTTTTTTTCTGAAATTCGAATAAGAAAATGCAAAGAAACGCAAATATCGCATCTTAAAGTACAGTGGTGCATTAGAATTACTCTTGATTTTTCTCGACCAACCTACATGACATACCTACTGAACGTGCACTTTCATTTCAAAAGAGAAATTTTACAGTTTTTAAAGAGTTATTATATTTTGTAGAGCAAATCAAAATTTACATTAGAAAAAAAATGATATCTTTTAACGGTCACAAAATTACTCATCTTAAAAATGGTGGGTCATACGGCAATGGTATACCCATTGAACAGTGTTTACGATTTCGGAAAATTTTGGACCCTGGCACAAAACTACTTCACTGAATTATTTTTCCCTTTTTTTTTCATGAATTTTATCGAAAATTTGTTCAAAACCTAATAAATAGTTTTTAAATATCCAATATCTCGGAAAATTTCGCTACCCAGGACCCACGACACAAATGCTGAAAACGAAAAGGACTACCTATTAAACTTTTGGTACATTTATAACTTTGAATCTTACATAATTTTCAACTAATAGATATATAGCCCGTTTTAAACTGAAATAGAAAAAAAAAGAGACAAACATGTCAAAAAAAAACCGTAAATCTAACTTAAAATAAAATGTTGTGAAAAAAATTCTAATGTTTGTACACGATTGCAAAACTCTGCAGGTGCCGGCACACCAAGATCGGCGGCGCGTTCGTGCGCGGCGTGTCGGGCGGCGAGAGGAAGCGGACGAGCATCGGGTACGAGATCCTCGTCGACCCGTCGCTGCTGCTCCTCGACGAGCCCACCTCGGGCCTCGACTCCACGTCGGCGGCGAAGCTCCTCGTCGTGCTCCGCCGCCTCGCCAGGTCGGCGGCCCGCCGGACGGTGATCACCACCATCCACCAGCCCTCCAGCCGGATGTTCCACATGTTCGACAAGCTGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACACAGTTCTGATTTTCAAAGAAAAAAAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023240