BGIOSGA023350

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Revision as of 13:31, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023350| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023350, complete gene.| tag = P0416A1...")
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Gene Name

BGIOSGA023350

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023350, complete gene.

LocusTag

P0416A11.11

Ensembl Transcript ID

BGIOSGA023350-TA

Ensembl Protein ID

BGIOSGA023350-PA

Length

4777

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:27362563..27367339

Sequence Coding Region

27362563..27363421,27365242..27365273,27366728..27367339

Genome Context

<gbrowseImage1> name=IndicaChromosome06:27362563..27367339 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:27362563..27367339 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGAGCTCGTTCACCTCCTCCGCTATCTGTTCTCGGTACCCATGCTGTTCTTCATCGTCCCCCTCCTCTTCCTCGTCTGTTCGCCGGGGCGCCGCCGTGGCCGCGGCAGCTGCAGGCTCCCGCCGTCGCCGTGGGCGCTCCCGGTGGTCGGTCACCTCCACCACCTGGCGGGCGCGCTCCAGCACCGCGCCATGCGCGACATCGCGCGGCGCCACGGCCCGCTCGTGCTGCTCCGGCTCGGCAGGCTCCCCGTCGTCGTCGCCTCCTCCGCGGACGCCGCGCGCGAGGTCATGAGGACGAGCGACGTCGCCTTCGCGGCGCGCCCCGTCAACCGGATGATCCGGGTGGTCTTCCCGGAGGGATCCGAGGGGGTCATCTTCGCGCCCTACGGCGAGACGTGGAGGCAGCTCCGCAAGATCTGCACCGCCGAGCTTCTCAGCGCCAGGCGCGTCCATTCCTTCCGGTCCGTCCGCGAGGAGGAGGCCGGCCGGATGCTCCGGGCGGTGGCGTCGGCGGCGGCGCAGACGACGGTGAACCTCAGCGAGCTGATGTCGGCCTACGCCGCCGACTCGTCGGCGCGCGCCATGATCGGGCGGCGGCTCAAGGACAGGGACACGTTCTTGGCGATGGTGGAGCGCGGGATCAAGCTGTTCGGCGAGCAGAGCTTGCCGAACCTGTACCCGTCATCGCGCCTCGCCGTGCTCCTCAGCACAATGCCTCGCCGGATGAAACGGCACCGCGAGAGAATGACGGCCTACCTGGACGCCATCATCGAGGAGCACCAAGAGAGCAGAGCGTCCCGGGAAGACGACGAGGACTTGCTCGACGTGCTTCTCAGGATCCAGAGAGAAGTAATACTCAATCCAAGAAGAACGGAAATTTGGGACATGTTCATTGGGGGCAGTGAGCCACCGGCCATAACACTGCAATGGATTATGGCTGAACTCATCAGAAACCCAGAAGTGATGCAAAAGGTACAAGATGAGGTTCGACAATTGCTTGTTGGACAGCACAGAGTCACAGAGGAAAGCCTAAGCAAACTGGGTTACATGAACTTAGTCATCAAGGAGACGCTACGGTTGCACCCTCCAGGACCACGACTACTATTGCGAGTGTGCCGAACCACTTGCCAAGTGTTAGGATTTGACGTTCCTAAAGGAACAATGGTGCTGGTAAATATGTGGGCTATAAACAGGGACCCTAAATATTGGAGCCAAGCAGAAGAGTTTATTCCAGAGAGATTTGAGAATGCTGGTATTAATTTCAAAGGAACAAACTTTGAGTATATGCCATTTGGAGCAGGGCGACGCATGTGTCCTGGGATGGCGTTTAGTCTAGTAATGTTAGAGCTCGCACTTGCGAGTCTCTTGTACCATTTTGACTGGAAGCTACCCGACGGGGTAGAGATTGACATGAAGGAGCAAAGTGGGGTCACAACACGGCGAGTACACGACCTTATGCTTGTTCCTATCATCCGAGTGCCATTACCAGTGTAG</cdnaseq>

Protein Sequence

<aaseq>MAAELVHLLRYLFSVPMLFFIVPLLFLVCSPGRRRGRGSCRLPPSPWALPVVGHLHHLAGALQHRAMRDIARRHGPLVLLRLGRLPVVVASSADAAREVMRTSDVAFAARPVNRMIRVVFPEGSEGVIFAPYGETWRQLRKICTAELLSARRVHSFRSVREEEAGRMLRAVASAAAQTTVNLSELMSAYAADSSARAMIGRRLKDRDTFLAMVERGIKLFGEQSLPNLYPSSRLAVLLSTMPRRMKRHRERMTAYLDAIIEEHQESRASREDDEDLLDVLLRIQREVILNPRRTEIWDMFIGGSEPPAITLQWIMAELIRNPEVMQKVQDEVRQLLVGQHRVTEESLSKLGYMNLVIKETLRLHPPGPRLLLRVCRTTCQVLGFDVPKGTMVLVNMWAINRDPKYWSQAEEFIPERFENAGINFKGTNFEYMPFGAGRRMCPGMAFSLVMLELALASLLYHFDWKLPDGVEIDMKEQSGVTTRRVHDLMLVPIIRVPLPV</aaseq>

Gene Sequence

<dnaseqindica>1..859#2680..2711#4166..4777#ATGGCGGCGGAGCTCGTTCACCTCCTCCGCTATCTGTTCTCGGTACCCATGCTGTTCTTCATCGTCCCCCTCCTCTTCCTCGTCTGTTCGCCGGGGCGCCGCCGTGGCCGCGGCAGCTGCAGGCTCCCGCCGTCGCCGTGGGCGCTCCCGGTGGTCGGTCACCTCCACCACCTGGCGGGCGCGCTCCAGCACCGCGCCATGCGCGACATCGCGCGGCGCCACGGCCCGCTCGTGCTGCTCCGGCTCGGCAGGCTCCCCGTCGTCGTCGCCTCCTCCGCGGACGCCGCGCGCGAGGTCATGAGGACGAGCGACGTCGCCTTCGCGGCGCGCCCCGTCAACCGGATGATCCGGGTGGTCTTCCCGGAGGGATCCGAGGGGGTCATCTTCGCGCCCTACGGCGAGACGTGGAGGCAGCTCCGCAAGATCTGCACCGCCGAGCTTCTCAGCGCCAGGCGCGTCCATTCCTTCCGGTCCGTCCGCGAGGAGGAGGCCGGCCGGATGCTCCGGGCGGTGGCGTCGGCGGCGGCGCAGACGACGGTGAACCTCAGCGAGCTGATGTCGGCCTACGCCGCCGACTCGTCGGCGCGCGCCATGATCGGGCGGCGGCTCAAGGACAGGGACACGTTCTTGGCGATGGTGGAGCGCGGGATCAAGCTGTTCGGCGAGCAGAGCTTGCCGAACCTGTACCCGTCATCGCGCCTCGCCGTGCTCCTCAGCACAATGCCTCGCCGGATGAAACGGCACCGCGAGAGAATGACGGCCTACCTGGACGCCATCATCGAGGAGCACCAAGAGAGCAGAGCGTCCCGGGAAGACGACGAGGACTTGCTCGACGTGCTTCTCAGGATCCAGAGAGAAGGTGACCTGGAGGATCCAGAGAAAGCATCAGATCAACGATCGGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGTGGCAGGCTAGGGCTCAGGGATGAATCGAGGAGCTAGGGGTTTCAAATTTGATTTTTGGAATTTTTGTTTTTTGGCTAAAATTATTTTCGCATGAAAATCTTATTTTTGCATGCGGTTGTTTTGCTCATATATAAATTGGTGATTTTCGCAGACACCAAGGTGCATCGAGCCACCCAGTTGACTACGGAAATCGGTTTTTGGCCATATGCAAAAATCGTCTTTTACTAGTGAATTCCCTATTAATTTAAGCAACTTATAAATAAAAATATTAATCAATATATTTAAAATATGATTAGAACTTAATATTTATAATATCAATAACTATCACCCATGAAACATACAGATTGACGATTTTTTATATTTAGGTATCAATTTTTTTTGGAAATTGCGGACATGTCTAGATGTCTAGATAGCTTTTGCTCAAAGGGGAGCCATTTTTGCTCTCTCTGAGGGGCAAGGATTTTCTAGGCTAGGTAGACTAATTTGCTAAGGAAAGTTAGTTTTTAAAGTAGTTTACCAAATGCCCAATCTAGCCTGTAAGGAGAGGAAGTTACTAGCCTAGAATCCAAACGTGCTCGCATCTTGCGATTGTATTCTAAGAATTAGAGGTTGAAAATATGAAGCCCTTAGTTTATTTTATTCCTTTTCACTTATCCTTTTGTTAAACAAGAGGCACCAGCGTGAATAAGGTCCTTTTTTTTAGGCTTCTAAGCTAACTTGTGAACTGAAAAATTTAAGCCCAGGTAGCTTTTTCATTTGGCGTTTTTAAAACCATAAGCTATTCTTACACGATTAAGAAAAACTAGATTGAAAAAACTTTTTATCCTTATGTGAGATGACAATATGATTTCACCATTAAACTTATGATATTAGATCCGCCAATTCATAAATCATGAAAGTCAAAAGACCGACTTAAAAGCTTAAACCAATAAATCTAAACCTAGAAAATGAGAGTGCTAAGTCTATAAGCAACGACGGCCGGCCAGGAGTGCCTTATATATAGTTTAACAGTCGATCGAGTAGCCGGCTAGCCCGTCGATAAATTTGTGATCTTTTGACAAAGTAGTGAGCTTTGACGGAATTTGTTTAACATTATTGTGTATATATGTCGCTCTTTTATGCATGCCGTAAGTTTGGAACCTTGGACTTCTACTAGATTTCTTCCGATCGAGCTCACATCACGTTTGTTTGCAGCTTTTGCGGGCTTTGACTAATTAATATGTGCATTTTTGGGTCAACTGATTTGAACAAGTAGTGGCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGTTTGGGAGGTAGGAACTCCTGAGATATTCAGATATTCCAGAGCTCCGAGTGCATTAGTATAGAAATTCATGCACGAACACAATATATATAAGGCGTTGCTGTCATGTACAAGAGCTGTGTTTTTTAAAGATAAAAGTACTGTACGTTTCCAGTTGTAATGTAACAAAAGTTTGCAAGATATATGCACCTTTTGAAAAATTGAAACATGAGTACTGCATCTCAACGTACATTGCAATATAATTTGTCTTTTATACCTGAATTAATTTGTGCCTCAAGCTAGTACCGCGTGAAGAAAATGCCATGTGGATCGATGAGAACAGCTGATCTCCTACATTAAGGTCAACTCTTAGACTTAAAAAAAGGTGATTTGATAGTGAATCACCGAACTATACTATATATTGTGTGAAGTAATACTCAATCCAAGAAGAACGGAAATTTGGGTAATAAAGACAAACTCGTGTGTTAAGTGCATGCATACGTAATTAAGCACCGATGAAATAGCCGCTTAGGAGTCAAAATGATTCTTTTATTTTGAAGAAAATTTGAAACGAAATTCTAAGTTGACTTAAAAAGCTGACTCTGTTTTTTTCTGACTGCTGACTCTGTTAATTATTTTCTATCAATCACCCATTGTTTTTTATCTAAAACCAATCTCTGTTTTGAAGTAAATGCAGATGCAGAAGTAGCATAGTACAGGTTTACAGGCTCATGGAGTATACAACTCAGAAAACACAATTACAAGGGTCTAAGTAATGAAATCATCAAAAGCTAGTGTTCTTATCTTCTAAAAAAAACTAGTGCTCTTTTGAAAGTCAAAATAAGGACAAATTTCAACTTAGTTCGTACATCCGAAGCCAAGAAATTTGATTGAATTTCGACAAAGAAATCAACCGTCTCATCTAGCTCGTCTCCGTGTTAGGAACAGGAACACTAACAGTAGCATGCAGCCACAGATCGCTCTTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACCCGTGCGTTGTAACGGGTGAAGTCTATTTTAGATCTTATTATTGTTATATGGTTTAGTTAAGATAAAATTCGCTATGGGAGTTTGCTTGGATATATATATATATATATATATATATATATATATATATATATATAGAAAATCATGAGCTGCAGTTAGGAGCAGGGGCGGATCCAACATGGGTGCAGGGGGACTTGAGTCCCCCAACACCCACCAGACCCATGGATACCCCCCTGAGTTCCTCCTAAAATTTTTTCGTCGTGGTTGATAAGATAGGAGGTGCTAAAGGTCTCTTAATAACATTTTAGTATAGTTTAATATTGAGATTATGTGTTTATATCGGTGTACACGGTATGTTGAGTCCCCCAACTTTTTGTTCCTGGATCCACCCCTGGTTAGGAGTCCGATCGTCTCAGGTTAGCATGTGAGTTTTTTTAAACAGATTTCTTATATGATTCCTTCTGTATTATTAAAAGTGAATGATCTTAAAAATGACTCAAATGCGGATATGTATTTTCAAAAGCAAACGAAGTTAAAAACAGACTCATACACGGATGGCGTACCATACAACTCTTACATTCTATTTCTATAGGCTTAAATTTCATATACAACTCTTAACTTATATTTCTATAGATGTAATTATATTTTGTATACAACTATATCAGTCAAACTATACCATTATAATTAATCTGAAACCAACAAAATCGGGTAGTTAAGATCATTTTTTTATTAATGAGGAAGTTTCTAGCATTTACAACAGACGTGATGCCTCACTTCAAAACTGTTTTAATAATATGATAGATTGAAAAAATTGTTGCCATTGCATTTTCCATGAATATATGCTTACAAGTAATGAAATTTTGTCTTTGTACCGTGTAGGACATGTTCATTGGGGGCAGTGAGCCACCGGCCATAACACTGCAATGGATTATGGCTGAACTCATCAGAAACCCAGAAGTGATGCAAAAGGTACAAGATGAGGTTCGACAATTGCTTGTTGGACAGCACAGAGTCACAGAGGAAAGCCTAAGCAAACTGGGTTACATGAACTTAGTCATCAAGGAGACGCTACGGTTGCACCCTCCAGGACCACGACTACTATTGCGAGTGTGCCGAACCACTTGCCAAGTGTTAGGATTTGACGTTCCTAAAGGAACAATGGTGCTGGTAAATATGTGGGCTATAAACAGGGACCCTAAATATTGGAGCCAAGCAGAAGAGTTTATTCCAGAGAGATTTGAGAATGCTGGTATTAATTTCAAAGGAACAAACTTTGAGTATATGCCATTTGGAGCAGGGCGACGCATGTGTCCTGGGATGGCGTTTAGTCTAGTAATGTTAGAGCTCGCACTTGCGAGTCTCTTGTACCATTTTGACTGGAAGCTACCCGACGGGGTAGAGATTGACATGAAGGAGCAAAGTGGGGTCACAACACGGCGAGTACACGACCTTATGCTTGTTCCTATCATCCGAGTGCCATTACCAGTGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023350