BGIOSGA023416

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Revision as of 13:32, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023416| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023416, complete gene.| tag = OS06G06...")
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Gene Name

BGIOSGA023416

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023416, complete gene.

LocusTag

OS06G0660800

Ensembl Transcript ID

BGIOSGA023416-TA

Ensembl Protein ID

BGIOSGA023416-PA

Length

5975

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:28925123..28931097

Sequence Coding Region

28925123..28925237,28926265..28926394,28926471..28926539,28926693..28926758,28926839..28926910
,28926998..28927069,28927149..28927220,28928349..28928414,28928579..28929054
,28929139..28929497,28929602..28929870,28929953..28930091,28930496..28930635
,28930785..28930941,28931014..28931097

Genome Context

<gbrowseImage1> name=IndicaChromosome06:28925123..28931097 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:28925123..28931097 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCGGGGAGGTACGGTGCGGCGTGGAGGTGGGGTTGGGTTGCGGGCGCTGGTGGTCGTCGCCGTCGCCGCCGCTGCATTGGTGGTGGCGCGCGCGGACACCGCCGCCGCTGACGTCTCTGCTATAAATGGATTGTACATTTCACTGGGGTCGCCAAAACTTCCTGGATGGTCGGGGAATGGCGGAGACCCCTGCAGCGAGCTTTGGCAGGGTGTTGTATGCACCGGCTCAAGTATAACCTCAGTTACGATGAATGCTGCAAACTTGGGGGGTCAGCTTGGTGGCTTAGGGAACTTCACCTCCATCGTCACCATAAATCTTAGTAACAATAAAATTGGTGGAACTATACCAGAAGACCTACCGGTTACGTTGCAGCATATTTTTCTTTCAGCTAATCAGCTCACTGGAAGCATCCCAAGTTCATTGGCAAAACTTAAAAATTTGGCAGACATGTCACTCAATGACAACCAACTAAATGGGCAACTGCCAGATGCTTTTGGTTCACTCACTGGACTTGTAAATTTGGATATTTCTTCTAACAACTTGACTGGTGTGTTACCACCATCTATGAAAAATCTGTCATCTTTGACTACATTGAATATAGAGAATAATTTGTTTTCTGGACCAGTGCCTCCAAAGTTGCAGAGCATACCAAACTTCAAAAAGGATGGGAATCCATTTAATACCAGTATAGCTCCTTCTGCATCACCACCATCAACACCCGGAGGACCAGCACCAACTCCAACACCAACGAGACCAGCACCAAGTCCGTCACCAACAGGACCTCCAACACCATCACCAACCAATCCAAATCTAGAACCATCACCACCACCTCCATCCTCTTCAGCCCCTCCACCATCTAGAACACCCTCAAACTCTTCTGACGGGCCAACTACTCGAGACAACATTTCATCATCTAAGAAACAGAATTCATCAACCCTCAAAATTGTCGGATTTGTTTTTCTTGGAGTAGTGCTGTTCATAGTTACAGTCCTGCTGGTGATATTTTGTTTGTCCAAGTACCAAGAGAGAAGGTCAAGGTATGATTATAACAGAAGTCAATTGGCAAGGGTGCATCATACAGTTGAACACAGAATCAACCCGTCTATAGTGCAACCAAGGGATGATGCTAAAAAAGATCAGCAAAGTTTGGCAGCTGTCCCTAAGAAGCCTCTTGAAAGCCAAAGAGAACACATAATTGATTTGGAGCACCCAAATAATTTGGCGCGTACAAATTCAGAACTTTTTGCAGTTGATCCACCACCCCCACCACCCCCTCCTTTCCTGCCACCATTCCCTGTTGAAAAAGTTACTGTAAATCCTGTTGTTCCTCCAGAAAAGAGATACATATCTCCACCAAGGATAAATAAACCAACTTCTGCCACTTCATTCTCTGTGGCATCTCTTCAGCAATATACAAAGCAGTTTCAGAGAGGAGAATTTGATAAGAAGAGTAGACTAGGAAAGGTATACCTAGCAGAGTTTCCTGAAGGAAAGTTTTTGGAAGTAATGAAGATTGACAATACTAATGGAAGAATATCAGTAGATGAATTTCTAGACCTGGTTCAGCTTGTCTCGGATATCAGGCATCCTAACATCCATGAGTTAGTTGGATATTGTGCTGAATATGGGCAGCGGTTACTTGTGTACAATCACTTTAGTACAAAAACACTAGATGATGCACTTCATGATAGAGAGGGAGTTGATAGTACACTCTCATGGAATGCTCGCCTCCAGGTTGCTCTTGGTTCAGGAAAGGCCTTAGAGTATCTCCATGAAAGCTTCCAGCCTCCAATTGTGCATCAGAACTTTGAACCGGCTAATGTACTCCTTGATAATAAATTTTCAGTGCGTGTTGCTGAATGTGGACTAGAAAAATTGTTGGCATCAAGTTCTGTCACTCAGTTGGCAGATCGAATGCATTCACTGTTGAACTATGAACCACCGGAATCCCGGGAATCTGGGATAGTTACAGAACAAGGTGATGTTTACAGTTTTGGAGTAGTGATGCTAGAAATTCTTACTGGGCGTAAACCATACGACAGTTCACTCCCACGTGCTGAGCAACATCTTGTTAGATGGGCCAATTCTCAGCTTCATGACATAGAATCACTGTCCAGGATGGTGGACCCTTCTATACAAGGGCAATGTTCTGAGAAAGCACTGTCACGATTTGCTGACATAATCAGCGGGTGTATCCGGGCACCACAATTCAGGCCACCAATGTCTGAAGTTGTCCAAGACCTAGCTAGAATGGTAAATGAAACTGGTGAGGAATCGGAGTAA</cdnaseq>

Protein Sequence

<aaseq>MRGGTVRRGGGVGLRALVVVAVAAAALVVARADTAAADVSAINGLYISLGSPKLPGWSGNGGDPCSELWQGVVCTGSSITSVTMNAANLGGQLGGLGNFTSIVTINLSNNKIGGTIPEDLPVTLQHIFLSANQLTGSIPSSLAKLKNLADMSLNDNQLNGQLPDAFGSLTGLVNLDISSNNLTGVLPPSMKNLSSLTTLNIENNLFSGPVPPKLQSIPNFKKDGNPFNTSIAPSASPPSTPGGPAPTPTPTRPAPSPSPTGPPTPSPTNPNLEPSPPPPSSSAPPPSRTPSNSSDGPTTRDNISSSKKQNSSTLKIVGFVFLGVVLFIVTVLLVIFCLSKYQERRSRYDYNRSQLARVHHTVEHRINPSIVQPRDDAKKDQQSLAAVPKKPLESQREHIIDLEHPNNLARTNSELFAVDPPPPPPPPFLPPFPVEKVTVNPVVPPEKRYISPPRINKPTSATSFSVASLQQYTKQFQRGEFDKKSRLGKVYLAEFPEGKFLEVMKIDNTNGRISVDEFLDLVQLVSDIRHPNIHELVGYCAEYGQRLLVYNHFSTKTLDDALHDREGVDSTLSWNARLQVALGSGKALEYLHESFQPPIVHQNFEPANVLLDNKFSVRVAECGLEKLLASSSVTQLADRMHSLLNYEPPESRESGIVTEQGDVYSFGVVMLEILTGRKPYDSSLPRAEQHLVRWANSQLHDIESLSRMVDPSIQGQCSEKALSRFADIISGCIRAPQFRPPMSEVVQDLARMVNETGEESE</aaseq>

Gene Sequence

<dnaseqindica>1..115#1143..1272#1349..1417#1571..1636#1717..1788#1876..1947#2027..2098#3227..3292#3457..3932#4017..4375#4480..4748#4831..4969#5374..5513#5663..5819#5892..5975#ATGCGGGGAGGTACGGTGCGGCGTGGAGGTGGGGTTGGGTTGCGGGCGCTGGTGGTCGTCGCCGTCGCCGCCGCTGCATTGGTGGTGGCGCGCGCGGACACCGCCGCCGCTGACGGTAAGTTAGTTGGTTCGTGCTTTGACTTGGGTTTTTTTTTTTTTTTTTTTGGTTTTGTTCGGTTGGTGTCGATACGGGGAGACGACTCGGATTCCTCGCTGCTCGTGCTGTTCGTGTGGTGCGTGCTCGCGTGCGTGCGTGGGGTCCGTGGGTTTCGGTTTCGTCGAGATGAGCAGGGGGAGCAGGGGGATTGGTTCGTTCTCGTTGTGCTCCGCCGCTGCAGCTGCTTGCAAGTTTGCAACTGCTTCGAGATGAGTCCATGGTTCGTGTTGTTTTCGCTGTTATTTTTTTTAGCCGCTGCAATTAACTGTGCGTGGTGAGATTGTGTCGGTGGCGGCGCGGGCGTCGTGGGAATGGATCATCGGTTCTGTGAATTGGCCCGGTTCGACTCCATCATTGGAATTGATTAGTTTTTGTCTTGAGTTCAGCACAAATGCCATTTGGCAAGGCGGTTGTGGCATGTTCTAATTCGGATTAATTGATGTTCTCTTGCTTGATAAAGCAATCTGGCTGTCCCTTTCGTCTGGGATAACGAAAGGAACTTTTGAGGCCTGTGATGATGTGGTGTCGTGTGCTTCATGTCTTATCATCCTCCATAAAAATGGGAGAAAGACTGAAAGAGATGGATTGTTCGCATTCTGGATTGGTGGAAACAGGATAACATGCAGGAGAAAACATTTGTATTGGCTATGCAAGTAATAGCAGAATGGACACCTTTAATTGCCATACTGATGAACAACTGAACATAATGAAGGGGGTAGGATATGATCATAGGAAGGGAATAATGTAAGTGATAGGTGTATGTTGTTCTCATTGAGTCATTGTGATGTGCACATTACTCAATTTAGTTAGGTTTATGCTCTAAAATCAGGGACTGAGCAATTCCTTTTCGTGATGTGCACATGTTATTCCTGCAATTGTTCTTCATGTGTCCTGCAATTTAGGTGATTTTGTGGTCCTCGTAGAAAGGTGCACACTGTTTTTCTTTGTAATAATGACTTCTTTATGTTTCCCTTAACTTGTGTAGTCTCTGCTATAAATGGATTGTACATTTCACTGGGGTCGCCAAAACTTCCTGGATGGTCGGGGAATGGCGGAGACCCCTGCAGCGAGCTTTGGCAGGGTGTTGTATGCACCGGCTCAAGTATAACCTCAGTGTAGGTTCTTCATTGCGTTTTCTTTTATCTCATGGAAATCCTTTGTTTTGTTCTCATATTAACTCACCGTTTGTAGTACGATGAATGCTGCAAACTTGGGGGGTCAGCTTGGTGGCTTAGGGAACTTCACCTCCATCGTCACCATGTAAGGGTGTTGAAGTTGTAAAGTTTTTCCACAACCATCGTAGTGTCTGTCAAAACTAGAAGATTCTAGGATTTCTTTTTTGTCTGGTTGAATTAACTCTTTTTTTATGTCCTGGTTAAATTTCTCATTGAATTATTTATATGTTTGATGTAGAAATCTTAGTAACAATAAAATTGGTGGAACTATACCAGAAGACCTACCGGTTACGTTGCAGCATATGTATGTACGATTGATCTTATCTATAGTTTATCAGTCTTTGGTATTATTCAATTGATCCTGTGATCTTTGCACTGGTACAGTTTTCTTTCAGCTAATCAGCTCACTGGAAGCATCCCAAGTTCATTGGCAAAACTTAAAAATTTGGCAGACATGTACATTCTCGCTTCTTTCCGCAGAAAGTTTATATACAGGCTAGTTTGTGTTGTAAATCACATATATCATTTTCCTTGTTTTCCCAGGTCACTCAATGACAACCAACTAAATGGGCAACTGCCAGATGCTTTTGGTTCACTCACTGGACTTGTAAATTTGTAAGATACCATTTCTGTACGTTTTTATGCCTTGGTGTTTGGTTGTTGTCTTAGTTTGCTGATGGTCGGTTTCTTGCAGGGATATTTCTTCTAACAACTTGACTGGTGTGTTACCACCATCTATGAAAAATCTGTCATCTTTGACTACATTGTAAGTGTACACCTATGTTTCAACTTAATTCCTATTACATTTCCTATCTTTCAACTTAATTCCTCATCTGCTATATCATAGGCACATGCAAGGCAATCGATTGTCTGGGACTCTTAACGTCTTGCAGGATCTCCCTCTTAAAGACTTGTATTCCCTCTCTTCTCCTTTATCACCATGTTCATTCAGTTTCTCTAGCATGTTATGATCTAAAAATTTGCAGGCATGCTAATTTTAGATTCTTTAATTTGGCTGATCTGTACTTTTTTTTTTCCTAAAGCCTATGGTATCTTTAAAGAGTGCATGTGACTGTGGTATGATAATAACTTTTGGCTTCTATACAATATAAAGTATATATTCTGTGCTTAACTTTGTTATGGAATCTTTAAAGATAACATATGGGACATACAGATCTACAGTGTTTGCAATCTATACACTGCAATTTCCATCACTGATGTCATACGTACTTATAAGTCCCTTCAGATTTGCACATAGGAATTAAGGTAGTCTATGAAATGACAATATGTTAACCATTATCATTCTATATTATTACTTTTTCTTAGATAAATTTAAGCTAACATCTAACTTCTCTGTTCTATGGTGTTTGGGGAATTTGGTGCATCCGTGCATGTAGACATGGGGTAGGAGATACATGGGAAAGGCAAACCATTTGTTGATGAAAATCCATTCATTTAAGCAATGACATAGCAGTAACAAAAGAAACAAAATGCATACAAGTTCATAATTGGCTTATATTTAGAATAAAACTGAAAAGACTAAACTGACTTGTAACAGAAATCAGAGAGAGTAGGTGTAGACAGAAATGATAGAGTTTACAGGTCTCTCTGTAAACTCTATCATTTCTAGTAATGGAAATGGGAGGCTTTCACGCCTCTTGATCAAAAAAAAAAAAAAGGTGGAGACAGTGTCTTTACAAAAACCATTAACTGAATGTTTTTTTTTTACGCAACTGAATGTTTCACTTGAAAAACGAATGCTTCCCTTTTTACTATTGTTCTGATAAGCACTCCCTAGCAATGCTGCTTCAATACCTTGACCATTTTTGTTCAAACAACTATGTTCTTATTGAATAGTTGATCTTATATCCTTTAACATGTTTACTCTGATCAGGAATATAGAGAATAATTTGTTTTCTGGACCAGTGCCTCCAAAGTTGCAGAGCATACCAAACTTCAAGTAAGATTTTTTTTCTTGTATTCAATTTCCTTTTGATGTCAGCCAGTTCAATTATAATCATTATCTTGTCTATCTTGACGTTATTTTATCTAATACAAGCTAAAAAAAACTAATCACAACAATTCTGTATGGCTTGTTAAGTGACTAACATTGTACAAATGCAGAAAGGATGGGAATCCATTTAATACCAGTATAGCTCCTTCTGCATCACCACCATCAACACCCGGAGGACCAGCACCAACTCCAACACCAACGAGACCAGCACCAAGTCCGTCACCAACAGGACCTCCAACACCATCACCAACCAATCCAAATCTAGAACCATCACCACCACCTCCATCCTCTTCAGCCCCTCCACCATCTAGAACACCCTCAAACTCTTCTGACGGGCCAACTACTCGAGACAACATTTCATCATCTAAGAAACAGAATTCATCAACCCTCAAAATTGTCGGATTTGTTTTTCTTGGAGTAGTGCTGTTCATAGTTACAGTCCTGCTGGTGATATTTTGTTTGTCCAAGTACCAAGAGAGAAGGTCAAGGTATGATTATAACAGAAGTCAATTGGCAAGGGTGCATCATACAGTTGAACACAGAATCAACCCGTCTATAGTGCAACCAAGGGATGATGCTAAAAAAGGTAACTTATGTTGAATTCCCAGTAGCATAATATAGATTTCGGTTACTTTTGGCATTCATATGAAGTGTTATTTGACATGTTCAGATCAGCAAAGTTTGGCAGCTGTCCCTAAGAAGCCTCTTGAAAGCCAAAGAGAACACATAATTGATTTGGAGCACCCAAATAATTTGGCGCGTACAAATTCAGAACTTTTTGCAGTTGATCCACCACCCCCACCACCCCCTCCTTTCCTGCCACCATTCCCTGTTGAAAAAGTTACTGTAAATCCTGTTGTTCCTCCAGAAAAGAGATACATATCTCCACCAAGGATAAATAAACCAACTTCTGCCACTTCATTCTCTGTGGCATCTCTTCAGCAATATACAAAGCAGTTTCAGAGAGGAGAATTTGATAAGAAGAGTAGACTAGGAAAGGTATACCTAGCAGAGTTTCCTGAAGGAAAGGTGTGTGCTAACCACTAAGTATTACCTATCCTAATGAGAAGTGTGATGCATTATATTCAGTGTGCAGTTAAAATATTAACCATGATTCCTGCTATTCTGTGTAGTTTTTGGAAGTAATGAAGATTGACAATACTAATGGAAGAATATCAGTAGATGAATTTCTAGACCTGGTTCAGCTTGTCTCGGATATCAGGCATCCTAACATCCATGAGTTAGTTGGATATTGTGCTGAATATGGGCAGCGGTTACTTGTGTACAATCACTTTAGTACAAAAACACTAGATGATGCACTTCATGATAGAGAGGGAGTTGATAGTACACTCTCATGGAATGCTCGCCTCCAGGTTGCTCTTGGTTCAGGAAAGGCCTTAGAGTGAGTAAAATTATGGTTCTATGTTTAATGTAATCCATGTATGGCTTTCATTTTTTCAACCTTTGTACTTCCTTTCCTGTAGGTATCTCCATGAAAGCTTCCAGCCTCCAATTGTGCATCAGAACTTTGAACCGGCTAATGTACTCCTTGATAATAAATTTTCAGTGCGTGTTGCTGAATGTGGACTAGAAAAATTGTTGGCATCAAGTTCTGTCACTCAGGTAAGATACAATATGTGTGATAAGTTGTTCCATGTATTTATTGAAGTGCTGAAGTTGCCATAGCTGAAGCATTTAAATTTAGAACATGTAAAGAGTGATTTACATTTTATAGTCCTTGAGGAGGTACCAACAGGTCCTTAGGTGTGACTAAGCTTATTGGAAATTTCCTTAAATAAACCTTACTAGAGAATTCTTCTCTACCCGTTGGTTGGAAATAATTAAATTTTGATTCACTGGCAATTACTTTTACTATGCTGCTAGACTAGTTGATGCCATGCTTTGTTGTTTGATCACAAATGAGTAGATTTAGCTAATTTAATTTTGCTAGGCAGTGAAGAAATCATCTTGTTATGTTGATGGAAATGACAGCTGGTGCACTTACAGCTTGTATGTTCTTGTTCCAGTTGGCAGATCGAATGCATTCACTGTTGAACTATGAACCACCGGAATCCCGGGAATCTGGGATAGTTACAGAACAAGGTGATGTTTACAGTTTTGGAGTAGTGATGCTAGAAATTCTTACTGGGCGTAAACCATACGACAGGTAAGAAAAATTTAAAGTCTCATTCTCTCATGATGTTTGATCAGGAGTTCAAGAGCTGTCCGTAATTGTTTTAGATCAAAATTTTAGTGCGAAACGAGGAAAGAACTATTTGATTAACATGCCTGTTTTATCCTCAAAAAAAATTTCAGTTCACTCCCACGTGCTGAGCAACATCTTGTTAGATGGGCCAATTCTCAGCTTCATGACATAGAATCACTGTCCAGGATGGTGGACCCTTCTATACAAGGGCAATGTTCTGAGAAAGCACTGTCACGATTTGCTGACATAATCAGCGGGTGTATCCGGGTAATTGATGTGTATTTTCTTCATTCGTACTAGGGATCATGTGTAAAATCTGAAACTTTCCTAATGGAGCAGGCACCACAATTCAGGCCACCAATGTCTGAAGTTGTCCAAGACCTAGCTAGAATGGTAAATGAAACTGGTGAGGAATCGGAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023416