BGIOSGA023440

From RiceWiki
Revision as of 13:32, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023440| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023440, complete gene.| tag = P0686E0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA023440

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023440, complete gene.

LocusTag

P0686E06.34

Ensembl Transcript ID

BGIOSGA023440-TA

Ensembl Protein ID

BGIOSGA023440-PA

Length

2221

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:29460919..29463139

Sequence Coding Region

29460919..29461089,29461359..29461432,29461526..29461580,29461883..29461957,29462030..29462103
,29462181..29462229,29462715..29462799,29462907..29462963,29463096..29463139

Genome Context

<gbrowseImage1> name=IndicaChromosome06:29460919..29463139 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:29460919..29463139 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGGAACAGCAGGATAGTACTAGTAAAAGCTCTAGCTCAAGCATCAGCAGCAGTACACAGGAGAGCGAGGAGGAGGTATCTATAACAATAGGTAGCCTCCTCGCCCAAGCAAAGAACAACAGTGGGCATAGTCTTGGAAGGCGCCTCTCTCAATTGGGTTCAATCCCGCACACTCCTCGAGTTAATGGAAAAATCCCTAATCTTGATAATGCAACTTTGGATCATGAAAGATTGTCGGAAAGGTTGGGAAATTATGGTTTGGCCGAGTTTCAAATAGAGGGTGATGGAAATTGTCAGTTCCGAGCTTTGGCAGACCAGATATTTCGCAACCCCGATTATCACAAACATGTGAGAAAGTTAGTCATGAAACAGCTAAAGGAATTCAGAAAACAGTATGAAAGCTATGTACCTATGGAATATAAAGTCTACTTGAAGAAAATGAAAAGATCTGGGGAATGGGGGGATCATCTGACTTTACAAGCAGCTGCAGACAGGTTTGGTGCCAAAATTTGTTTGCTGACGTCATTCAGAGACACCTGCCTAATTGAGATAGTCCCCAGGGATGTGACTCCCACAAGGGAGTTGTGGCTAAGCTTCTGGTGTGAAGTGCACTACAATTCCTTGTACGCAACTGACGATCTCCTAACCCGCAAAACCAAGAAGAAGCATTGGTTGTTCTAG</cdnaseq>

Protein Sequence

<aaseq>MSEQQDSTSKSSSSSISSSTQESEEEVSITIGSLLAQAKNNSGHSLGRRLSQLGSIPHTPRVNGKIPNLDNATLDHERLSERLGNYGLAEFQIEGDGNCQFRALADQIFRNPDYHKHVRKLVMKQLKEFRKQYESYVPMEYKVYLKKMKRSGEWGDHLTLQAAADRFGAKICLLTSFRDTCLIEIVPRDVTPTRELWLSFWCEVHYNSLYATDDLLTRKTKKKHWLF</aaseq>

Gene Sequence

<dnaseqindica>1..171#441..514#608..662#965..1039#1112..1185#1263..1311#1797..1881#1989..2045#2178..2221#ATGTCGGAACAGCAGGATAGTACTAGTAAAAGCTCTAGCTCAAGCATCAGCAGCAGTACACAGGAGAGCGAGGAGGAGGTATCTATAACAATAGGTAGCCTCCTCGCCCAAGCAAAGAACAACAGTGGGCATAGTCTTGGAAGGCGCCTCTCTCAATTGGGTTCAATCCCGGTAATATACAGTCATCCATATTTTTCTTTGTTCCCCCCTTGGCATTTGTTCCCTTGAACTCATCTTGAGCTGTACCATGATTAAATATAGGAATTCTCTCTCAATTGTACATAAATATTCCAATACAGTACTCAATATAATAACTAATACGATAATTATTACAGTTTTTAACTGCAGATTGTTAAATAAAAAAATAAAGTTCTTAATTTACAATAGTGTGCCTTCGGCTATGTTTTATGACAAGTTACTAATGCCCTCATGTATGGCAGCACACTCCTCGAGTTAATGGAAAAATCCCTAATCTTGATAATGCAACTTTGGATCATGAAAGATTGTCGGAAAGGTAAAAAAAAAACAGACCTCTCTCTCTCTCTCTAGAACAGTATGGCCATTGCGCTTTCTTATATTTCTCATTTGTCCTGATCCTTCTTGACAGGTTGGGAAATTATGGTTTGGCCGAGTTTCAAATAGAGGGTGATGGAAATTGTCAGGTTTGTTTTACCATTGAACCTAAATCATCATTTCATTTATAGATACGGTGCCGCATCATCTACACTATTTCAGAGTAACATTTTGAAGCAGCTGTTTTTTTTTTGTATTTACTGTTTTAAGGCTGCTGCCATTATCTTATACTGAATAGTGAATAATAGATTGGCCTACATTCTTTTGAAGATTAAGTGGCCTGTGTTGTTTGATCTTTATAGCTGATACTATGAGGTGTTTAGTAGAACTACACCTTCACCAGTCTGTACTTAAACCTGTTCCCTTTTCACTTGATGCCATATTGTTACAGTTCCGAGCTTTGGCAGACCAGATATTTCGCAACCCCGATTATCACAAACATGTGAGAAAGTTAGTCATGAAACAGGTGGATTTCTTGCCTCAATCATGCACTGTCATGAATATGCAACTGTGCTGAAACACTATCCCTGTTTTTCAGCTAAAGGAATTCAGAAAACAGTATGAAAGCTATGTACCTATGGAATATAAAGTCTACTTGAAGAAAATGAAAAGGTTATAATCCACCATCCAGAGAGTTTTTCCATTACTTTTGGCCTACTTACTCATACTTCATAACCATCACCTTGCAGATCTGGGGAATGGGGGGATCATCTGACTTTACAAGCAGCTGCAGACAGGGTAATGTTAGCTGTTGTGGTGTTATGATGGTTGAATAGTTTGTGGGAATACATCTTTTTTTAACTGCAGGTCCCCCTTTAGACTTTTTTTTATGCAGATATTTCTGATTGTTTTTGAACGACTGATCTTTCTGATTGTTGAACTTGTTCATCGTTTATACCTTAAATCCTACTTCAGGACATCAAATGAAACTGATAAATGCATATATTTATTATTGGCTTATTGCTGGCTAACATCCATTATAATGTCCTTAGGAAGACACCTGCAGTTTACCTGTTTGATAACATGTCATTGTTTCATACTGTTTGGTTGAACCATATAAAGAAGAAGTGACCAGTCAGGTTTTAATTTGTATTGATATTCATATACCCCCATCTGAACTGTCATTCAAGATGAACGCATAGTCTGTCACCTTGGACATCCTACCATTATATATCATGTTTCTAGATCATCTAACACCCTTTTATATCTCCAATTGTACACAGTTTGGTGCCAAAATTTGTTTGCTGACGTCATTCAGAGACACCTGCCTAATTGAGATAGTCCCCAGGGATGTGACTCCCACAAGGGGTGAGAACTGGGATGCTGTGTTGCTCCGATCATCACATACTTAGTTCCATGCGACGCTTTTTATCTCACCGATGGTATCTGATTCTTTCATGACCCGCATTTTGTAGAGTTGTGGCTAAGCTTCTGGTGTGAAGTGCACTACAATTCCTTGTACGCAACTGACGGTGAGTGTCTTTCTTAGACTATATGAACATCGAATTTTCGCTTATGATTCTTACATCATTAAATTCTAACATTCCCTACCATGATATTTTGCATTGTTAGTTCTGAATGTGCTCCTGTTATGTACAATGCAGATCTCCTAACCCGCAAAACCAAGAAGAAGCATTGGTTGTTCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023440