BGIOSGA023444

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Revision as of 13:32, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023444| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023444, complete gene.| tag = P0485A0...")
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Gene Name

BGIOSGA023444

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023444, complete gene.

LocusTag

P0485A07.4

Ensembl Transcript ID

BGIOSGA023444-TA

Ensembl Protein ID

BGIOSGA023444-PA

Length

5538

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:29510554..29516091

Sequence Coding Region

29510554..29510651,29511177..29511281,29511361..29511478,29511626..29511676,29511774..29511865
,29512004..29512103,29512464..29512583,29512673..29512750,29512914..29512960
,29513043..29513098,29513739..29513779,29514016..29514121,29515337..29515469
,29515542..29516091

Genome Context

<gbrowseImage1> name=IndicaChromosome06:29510554..29516091 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:29510554..29516091 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGGTCCTCATCGTGACCAGCGTGGGGGACATCGAGGTGGACCTCCACACCGACATGTGCCCCCTCACCACCAAGAACTTCCTCAAGCTCTGCAAGATGAAGTATTACAATGGGTGCCTGTTCCACAAGGTGGAGAAGGATTTCTTGGCACAAACTGGGGACCCAACTGGAACAGGAGCTGGAGGCGATTCTGTATACAAGTTCCTTTATGGTGATCAAGCTCGATTTTTTGATGATGAGATCCGACCAGACCTTAGGCATTCAAAAAAGGGAACTATTGCTATGGCGAGTGCTGGTGAAAATTGCAATGCCTCGCAGTTCTATATCACCTTGCGGGATGACGTAGACTACCTTGATGATAAACACACAGTGTTCGGCATGGTTGCTGAAGGCTTTGACACGCTGACAAAGATTAGTGAAACATATGTTGATGATAAAGGGAGACCATTTAAGGACATCAGGATTAAACATACGTATGTCTTGGATGATCCTTTTGACGATCCTCCTCAGCTCAGTGAACTTATTCCTGAGAATTCTCCTGTAGGGAAACCACAGGATGAGATTGCAGAAGAGCGCTTAGAGGATAGCTGGGTCCCTATGGATGAAATGGTGGCTCCTGAAGAACTTGAGGAGATGATCCGCTCCAAAGAAGCACATACAAATGCTGTGATTCTTGAGAGCGTGGGAGATATTCCAGATGCTGAGATCAAACCACCAGACAACGTTTTATTTGTTTGTAAACTCAACCCAGTAACACAAGATGAAGATTTATATACAATTTTTTCTCGTTTTGGAACTGTGACATCAGCTGAAATAATCCGTGATTACAAGACTGGTGATAGCTTATGCTATGCTTTTATTGAATTTGAGACAAAGGAGGCTTGTGAGCGGGCATTCTTCAAGATGGACAATTGTTTGATTGATGATCGAAGAATACATGTTGACTTTAGTCAAAGTGTTTCAAAACTGTGGGGTCAGTTCAGACAAAGCAAAAGAAATGCAAATAAAGATGGATGCTTCAAGTGTGGCGCCCCTGATCACATAGCCAAAGACTGTGACCAGGGCACTGAGCAGAAAAACAAAGGCCCAAGTTATGTCCTGAAAGATGAAAACACTCAGCGTGGTGGAAATAACCGTCGAAGCTATGATCTTGTCTTTGATGAAGATGGTGAAAATTATACTGATCAGCAAGATCCTGGAAGTACTGGCCGAAGAAAGATTCAAAGAACAGATGATCGCAAATCAGGGCTGCCACCTCGGGGTGACCATGACAGGATTAGCCGGGAGAGAACTCACAGTGATGAGAATGGTAGAGAAGGTGGTAAAGAAGGTGATAGGGACCGAGGGATTCGTAAGCACGAGGACTACCACCGTTACAATAAATCTGGTGAACGGAGCTCTAGTAGATACGATGATCGTGGCTACAGCAAGCACGAGAGCAGGGGCAAATATAGGGATGGCAATGATGATTACAGACGACAACCGGGAGGTGGCAGTCGATATGGCAGGGATAAGTATGAAGGTGAACGGCGCTACAGAGAAGATGATGGCCATGGAAGGAGTGACCGTCACAAGAGAGATGAAAGTGATAACAGGAAAAGAAGCCCAGATACTGGTAAGCATAGAAGAGAAGACGGTGGTCACCGTGAGACAAGCAAGCACAGGGAAAGGAGGCAGAGAGATGATAGATAG</cdnaseq>

Protein Sequence

<aaseq>MSVLIVTSVGDIEVDLHTDMCPLTTKNFLKLCKMKYYNGCLFHKVEKDFLAQTGDPTGTGAGGDSVYKFLYGDQARFFDDEIRPDLRHSKKGTIAMASAGENCNASQFYITLRDDVDYLDDKHTVFGMVAEGFDTLTKISETYVDDKGRPFKDIRIKHTYVLDDPFDDPPQLSELIPENSPVGKPQDEIAEERLEDSWVPMDEMVAPEELEEMIRSKEAHTNAVILESVGDIPDAEIKPPDNVLFVCKLNPVTQDEDLYTIFSRFGTVTSAEIIRDYKTGDSLCYAFIEFETKEACERAFFKMDNCLIDDRRIHVDFSQSVSKLWGQFRQSKRNANKDGCFKCGAPDHIAKDCDQGTEQKNKGPSYVLKDENTQRGGNNRRSYDLVFDEDGENYTDQQDPGSTGRRKIQRTDDRKSGLPPRGDHDRISRERTHSDENGREGGKEGDRDRGIRKHEDYHRYNKSGERSSSRYDDRGYSKHESRGKYRDGNDDYRRQPGGGSRYGRDKYEGERRYREDDGHGRSDRHKRDESDNRKRSPDTGKHRREDGGHRETSKHRERRQRDDR</aaseq>

Gene Sequence

<dnaseqindica>1..98#624..728#808..925#1073..1123#1221..1312#1451..1550#1911..2030#2120..2197#2361..2407#2490..2545#3186..3226#3463..3568#4784..4916#4989..5538#ATGTCGGTCCTCATCGTGACCAGCGTGGGGGACATCGAGGTGGACCTCCACACCGACATGTGCCCCCTCACCACCAAGAACTTCCTCAAGCTCTGCAAGTAAGCTTTCAGTTTACCCGCATCTAGGGCTTGTTCTATCTGTAAGTGCGCGGGATCATCTGGCTAGTACCAGGGTAACGCTGTCTCGCGGTTGAGGGGTTAGCCCTCACGAAGCAGTTTAGCGGCCAATTTTGGCGTTGCAGAGGGTGCTACTTGGTGTGGATTTGGTGTTGTATTCTAGAACCGCGAAGGGTGTATGAACTATGGAGTCTGCTGGGTTAAGATTAATTATAATTTAAGCTGCTGCTGATGTGTCGTGAATCATTGTGAATGAATTTACCTTCTTAGTGTAGTCATTAAAATGTAGGATGGAAAGATTGGGTCAATTAGGGGATCGCTCTTTGATTATTAGGGTTGTTATCTGAATTGAAAAAAAAAGTATGCTTACTGATATTGCAAAATAATGCACAATAGCAGTATTATGAATATGAAATAGTAATTTTATGGTTATGAAATATAGCTGAGTTGACTATTTATAGCAATGGGAGTAATCATCCTCATTCCTCCTATGATTTGACTTACCAGGATGAAGTATTACAATGGGTGCCTGTTCCACAAGGTGGAGAAGGATTTCTTGGCACAAACTGGGGACCCAACTGGAACAGGAGCTGGAGGCGATTCTGTATACAAGTAAACAATTGCTCAGATGTTTTACTGCCACTGATTGTTGAATACATGCCTGAAAAGGGATTCATTTGTTTTTCTGTAGGTTCCTTTATGGTGATCAAGCTCGATTTTTTGATGATGAGATCCGACCAGACCTTAGGCATTCAAAAAAGGGAACTATTGCTATGGCGAGTGCTGGTGAAAATTGCAATGCCTCGCAGGTGTGATACCATATTCCTAGCCTTCCTACCGAACTTAGCTCAGCTGTTTTGATAACCAGTACTTGATAATCCATTTTGAGGTCCTTAACTCCTTGCTGCTAACCTGCTATTTCTAACCTTTGATTTATGTTTCTGTGACTTTATTAGTTCTATATCACCTTGCGGGATGACGTAGACTACCTTGATGATAAACACACAGTGAGTAGTACCTTATTATATTGACTCACAGAATATTTTCTTTGGAAAAATCCACTTTATCTACAGTGATTCATATGTATGTCCTTATCAATTATAGGTGTTCGGCATGGTTGCTGAAGGCTTTGACACGCTGACAAAGATTAGTGAAACATATGTTGATGATAAAGGGAGACCATTTAAGGACATCAGGTAAAATACCTTTTTTAAAAAGTCTAAACTGAATAATTAGAACATGCTTGCTAATATTTACTTACTTTCTGGTGTTACTTTCTGTTGTTTCTGCTTTATTTCCAACTGCTGACCTTCTGCAAAATGTTCAATGGACAGGATTAAACATACGTATGTCTTGGATGATCCTTTTGACGATCCTCCTCAGCTCAGTGAACTTATTCCTGAGAATTCTCCTGTAGGGAAACCACAGGATGAGGTAATATGAGTTCTGCTATTTTGCTCATGTTGGAAAGATGATAAACCAAAATTGTCTCACCAAAATCACAGGCTGTCTTTTGTTTAATTCGTTTTACCTCCACATTCTTGAAAACTATTTATTTGTGCACATACCTTTTTAAAAGAATATGGTATGAATTTCAGTTGAGGCAGCCACTGGGTGTAGGTGTATTTTTTTTCCTTGTTCTGTCTGTACAAATTATCCCGATCCCTAAAATATCTAGACAGGCATGTTTCAGATTAGTCCTAGAAGGGTGTGGTTTTGCCGTGATTCTCCTGAATGCTATGTGTTGTCCTTTTAACATGGTCATGATATTTTCTTTTCACTGTCAATGTACAGATTGCAGAAGAGCGCTTAGAGGATAGCTGGGTCCCTATGGATGAAATGGTGGCTCCTGAAGAACTTGAGGAGATGATCCGCTCCAAAGAAGCACATACAAATGCTGTGATTCTTGAGAGCGTGAGTCCTGATGCCAAATAAAAAATTAACAGTTCGCTCATTATTATTCATCGTGTTATAACTGATAAAAATACCTTTGTCTTATTCAGGTGGGAGATATTCCAGATGCTGAGATCAAACCACCAGACAACGTTTTATTTGTTTGTAAACTCAACCCAGTAACACAAGTTCGTATCGGTTCTTAATTGATTGGCTTTGTTCTCTACTTCCACTACCTTTTTATGTATAGATTCACAGATCAGTTTGGAAGTCATATAGGTATTGAATTTATAGCAATATAGCTTGAAATATTGTTTGGTAACTAAACGGCTAGTGTTCATTGTTTTGTAGGATGAAGATTTATATACAATTTTTTCTCGTTTTGGAACTGTGACATCGTAAGCGCATTTTCCTAAGTTCAATTAATGTGCATATCTTCCTGTTTCTTATTTTGTTAACTTTTTTTATTATTCCTTGCAGAGCTGAAATAATCCGTGATTACAAGACTGGTGATAGCTTATGCTATGCTTTTATTGGTGAGTTTCATTCCTCAAAAGCTGGTGTACATTGACATACTGTGATCAAGCATCGGATTGTTGTTAGCTAGAGTTATGCTAGTCCGTTCATCGAACGCTTGAGCTTCATTGATAGCTTTCCCAGGCATTCATCCTCCAATTCTTTAGGCGTGTTGAACATCATGTTTTACCCTCTTAGATCTGTTATCCTAGTAAGGAACAACTGAGTGACCTAATTTGCAACAAGGTTCTGGTGTTTTGTGTAAGGCTGAGTTCCAAATGTTAGTGGCTATGGATATACTTTAGTTGCAGCATGTAAAGCACACCTTTTAGTTTGTTAATACTTAATAAACCAGCAAATGGGTTAAATGCATGACGTGGCAAAAAGACTAATGGTGTTTACTTGTATCTCCTCAAAAATAAACATTAACGATTTAAGAAAACAAACTGAGTAGCTCCATTGCACACTTCTGAGGTATTAAACAATATAAGTTTCTTGATAGCTCAATTTTTCTCTCAGGGTTACGGTGTCAGTGTGATATTTGGCACAGACTGCAGTAGACAGTAGATGGCCTAGAAAGAATTTATTGTTCCACCTTGATAAATTGGCAAGATCTGAATGCTATTATAAAATGCTAAATTTTATCTTGCTCTTTTGTAGAATTTGAGACAAAGGAGGCTTGTGAGCGGGCATTCTTCAAGGTTAGTTGCCTAAAATCCTGTTTCATGTGGCAGATAAAACTTGGTTCTTGTAATTGTACTTTATTTCCCTTCATTACTTAGCATTTCTTTGCTAGCATATTTTTATAAGTCATTTTTGCTTGACTAGTGAATGTTACTTGATTGTTTGTGCCTTGACAATTCAGTATTGTCTATATTTGTAATTATTTTACCAGTGTTTTCATGGGAGCATTGCTTACTCAATGATATGCTTGCAGATGGACAATTGTTTGATTGATGATCGAAGAATACATGTTGACTTTAGTCAAAGTGTTTCAAAACTGTGGGGTCAGTTCAGACAAAGCAAAAGAAATGCAAATAAAGGTATTCTTATTTCCATGGCCTTAGAATATGATTGCAGTTTTCAGTTTCTTTTTTATTTAAGCTAACTGCATGGTAGCTTTCTTTTTTCTTAAGGAAAAGCAGTAGGGGAGATCCTCTACTGTTACCCTTTCCTACAAGGAAAAGAACTATATAAATCTATCCTTCATCAAAATTCTTTTCATCTAGACTTTGGTGGCACTCAATTTCCTTTCAGACCATAATTATAGCATCCTCCTGTATCCTATAGAAATTTATTTATTCCTATAAGGAATTTAGTGTTTTGTACCATGCGGAAGATGTCTAGAGAAGTGTACTGATTATTATTCAGCACAGTTAAACCGTGTCAAGTGTAAAGATGGCAACAATGTTCCCAATAAGCCACAGGACAAAGAAGAAAGTAAACATCAATCTGAGCAAGACTTCCAACATGTTTTGCTTTCTCCTTAGCATCTCTTTAGTATCGCATCTCTGTCTTTAACATGCATTTGTTCTCTGGAGTTCATCTGTAAATGGCAGAAGTGTGATCTGAATACTGTGTCTTAGTATATTAGAAGTCTGCAGAGCCCCTAACAGAATATATTATTACTAGTCTTTATATTACCAGTTTTTGGCTAAACCACTTGCCGCGGATGGTTCAGATTGTGGCAAATAGCAAACTGGCCTAGCGTCATCATTTGCTAGGCATTCTGAAACTCAGATTGTTGGTTTCTTTGTATATGTAATATACGATCAATTTCAAATAGCCCTGTACTCAACTTAGCCATTAATTCTTCCAGTACCAAACTAACAGACCATGTTTTATTTCTTACAATATGAGCTGAGCAATGGACCTGAATATTCATATCTGCTTAAGATCATTTCTCTACTAGAGTAACTTGCACAATTGGTGAGCCATGGAACTGAATTCTCATAAGAGACCTTTGCCATAGAATATTAAATCATGAAATTCCTATTTTTCTGTAGAAAAGGTTGATTTATGAAATAATTTTGATACGAAACATCTCATCTTATATTTCTAGGTTGACCACATCCAAGCCCATTAATCTATAGGTACTAGGAAGTAGGAAGGTGTACGCAGATGCCCACTTCATTGCGGAATTTAACATTCTCAACTAGGACTCTTGAACTCTAGTTAGTTGTGAGACCATACTTTTTTACTATTTTGGAGTTAGAATTAATTCACATGAAAGCTATATGATGCAATTCTCTTTGCAGATGGATGCTTCAAGTGTGGCGCCCCTGATCACATAGCCAAAGACTGTGACCAGGGCACTGAGCAGAAAAACAAAGGCCCAAGTTATGTCCTGAAAGATGAAAACACTCAGCGTGGTGGAAATAACCGTCGAAGGTCATTTTCTTTTCCCTATCTATCATATTTCCTGATCGTCTCATTTTCTGATAATCTTCTGTTGTTTTGCAGCTATGATCTTGTCTTTGATGAAGATGGTGAAAATTATACTGATCAGCAAGATCCTGGAAGTACTGGCCGAAGAAAGATTCAAAGAACAGATGATCGCAAATCAGGGCTGCCACCTCGGGGTGACCATGACAGGATTAGCCGGGAGAGAACTCACAGTGATGAGAATGGTAGAGAAGGTGGTAAAGAAGGTGATAGGGACCGAGGGATTCGTAAGCACGAGGACTACCACCGTTACAATAAATCTGGTGAACGGAGCTCTAGTAGATACGATGATCGTGGCTACAGCAAGCACGAGAGCAGGGGCAAATATAGGGATGGCAATGATGATTACAGACGACAACCGGGAGGTGGCAGTCGATATGGCAGGGATAAGTATGAAGGTGAACGGCGCTACAGAGAAGATGATGGCCATGGAAGGAGTGACCGTCACAAGAGAGATGAAAGTGATAACAGGAAAAGAAGCCCAGATACTGGTAAGCATAGAAGAGAAGACGGTGGTCACCGTGAGACAAGCAAGCACAGGGAAAGGAGGCAGAGAGATGATAGATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023444

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA023444&oldid=45969"