BGIOSGA023455

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Revision as of 13:33, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023455| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023455, complete gene.| tag = OsI_241...")
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Gene Name

BGIOSGA023455

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023455, complete gene.

LocusTag

OsI_24139

Ensembl Transcript ID

BGIOSGA023455-TA

Ensembl Protein ID

BGIOSGA023455-PA

Length

4266

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:29813569..29817834

Sequence Coding Region

29813569..29813732,29813989..29814112,29814253..29814769,29814880..29815010,29815098..29815504
,29815627..29816751,29817060..29817212,29817390..29817834

Genome Context

<gbrowseImage1> name=IndicaChromosome06:29813569..29817834 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:29813569..29817834 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCGTGCGGCGGCGGCGGCCTCCAAGGCGGCGGGGAAGGAGAAGAGCAGGAGGAAGGGCGGCGGCGGAGGAGCAGGAGGAGGAGGAGGCGAGCAGCTGCTCACCGACCAGGTCCTCTCCCTCCGCGCCCGCCTCCACCTCGCCCTCGCGCTCGGCCTCGCCAAGTCTGATGGAGGTCCAAAGAAATGGCAGTCTACTGATGCTGGAATACAGTCTCATGTGCTCAAAGCAGCATCAGCCTTTCTTGGCTGTTTGACCAATGAGATGCTGCGGCTTCCTCCTATAAAGGAGTCAATTTCGGATATACTCATAGCACTGGAAGGTATTCTTCAGTCCAAGAATGTGTCGGTTCTGATCCAAGCAACTGATGTTAGCTTGAAGTTAGTTTCCAGTGTAGGAAATTTAGCTCGCCAATACCCGGTTTTAGAGATCGTTACATGCCTCGCGAGTCAGCTTTCTGCAAACCAGATAACTATAGCTGTCTCATCTGCAAGTACATTGAACTGCATACTGAACACCCTAGCAACAGCGAGAAGTTCGATTCATGCAGAAATTTGGGAAGCTTTGGAGAAAACCGATGCAGTTACAAGTGTCATTGGAGCTCTGCAGAATTACTCCCCTGATGTCCATCCATTAAACTATCTGATGGAAATGATGTCTCTGCTAAGAATTATACTGTGGATTTGGCCTTCTTCGAGATACCATGTATGGAGTAACTGCAACTTGATGGGGAAGCTAGCACAATACTGTGTTGCCTCTGAAATGGATGTTGCTGTTAGAGTCCTCAAGCTATATGCTGCTTTAGCTTTATGTGGGAATGGTGCAATGGTCCTTCTGAATAATGAAGACTTGATGGCTAAGGTTGGTGCGCTTTTGGGGAAGTCAAATCCATCTATTGCTAGAATTGAAGCATTGAAATTCTATCAGATTCTTTTGCGATCTTCAAAAGGGTGCGATCTGTTAATGGCTGCACACTATCAACACATTATTGAAGGCACAATCAACGCAATGTCTAGAGATGATGAAAGATTGTTAACAATAGAGGGCTGCCGCACTGCACTGCTGGTCCTTCGTTATGCTGGGGATCATCATCGGCTCTTTTGGTCTCATGCTATTGATGATGTATTATATAAGATTCTTACTGGTGGCTGCACCTCTTCACATAAAGCCAATCAGATTTTGTGCCACGACAAGCTTTTTAATATGGTTTCCGAGAACTTTATGGATATACATTCTTATGTGTGGGATATACTTGGAAATCTAGCAGTACATTGCAAAAATGAGTATCTCTCTGTTAGGAAAGGGCAAGACTCTGCCTTGCAGGCACTAATACATTGTATTTGCTCACTTGCAGCAGATGCTATGCAGAAAAGCAACACCATGAAATTATCCAAGGATGTGCATGAGCCAGCTTTGAGGGCTGTTCTGATGATGCTTCTCTCACCCAGTGGATACATTTTGTCTGAGGCAAGTTCTAAACTCTTACATGTTTTACCTTTAGGTGATGACTGTTTGAATATTCTGTTCACGTCGTTAGAATCAAATACTACAAGAAGCATTACTGCATCTTTTGACAATGTCAAAATTATGTCCAACCTCATGAGCCTAGCGGGCATGGTGATGTTACAACCTTCCAATAATTCCCTTAACACGAGAAGAGCTGTAGCTGTACTATCCACCATTATCAAGGAATGTGTACACAATAATATACATATCACGAGGCCAAAAGTTGTTTCTCATCTGCAATTTTGTTTTGAGGGAGGTTCATGTTGTAATCTTGTTAAAGAGTGGGAAGGTGAGAATATTGCTTTAATCTATGGTCTCATGGTGTTGTTTAATCTGCTGAAGAGCATCAATTTTGTTTGTATCCACTGTAAAAGGAATTTGGATGTGGGGATTGTGTGCAATGATTGCAGAGATCATTATAGTGAAGGTCTGATTAGAGTTCTTCAAAATGCGTCATGTCAAAACTTGAGCCCAGGACCGAAGTTGTACATTTCACGTATACTGAGTTTGTTTGGCCTATGCGGTTTTCCAAGCAAGTTGGGAGGAAAGATGAGAAGGGCCTTAGATGATAATGAGCTAGCTGATCTGGAACTGTTGCTTTCAAATGGTGAATCTTTAAAAGCTCATACAGCCATCATTTCAGTAAGGTGTCCAAAGTTGTTGCCATCTGCAAAATCCCTTGGTAGTGATGGAAAAATTACTGATGAATGGGGCAGATCATTTTATCATGTTCGAATGTCTGATCGTGTTGATAGTTGTGGCTTGAAGAAAATTTTGGAATACACATACACAAATTCTGTCATGGTAGATGATGACAACATTAAGCCAGTAAGGACACTTGCGAAGTATTGTCACTTGAAATCATTACAAGAGATGCTTCAAAAAGAGCAGCCTAGGTGGAACTCTGATTGTCCTAGATATGATCTTACTGCAGCACTTGAACCAGTTAAATGTTCATTCTCGGACATAATTCTGGAGGCTCAGTCAAACGAAGAAATGAAGTGTTACCATGGCTCATGCCAACTCTCGACTTCGCATGTTCACTGCCATAAAATTGTACTGAGCATGAGCTGTGATTACCTTCGAGCATTATTTCAATCTGGGATGCATGAGAGCTTCTCAGAAGTTATCAATGTTCCACTGGGGTGGCAAGCGCTGAACAAACTGATCCACTGGTTCTACTCAGGCGAGCTACCCAAGATCGACCCCGATTGCCGATGGCGAAACCTGAACAGCGAGGAGCAGCTTTCTCAGCTGCGGCCTTACGCCGAGCTGTCATCCCTGTCTGAATTCTGGTTCCTGGAGGGAGTGAAGGAGGAGAGCCTGTCAGTGGTCACCTCCTGCCTGAGTTCCACCAGCACGGCCGCCTCCGTCGAGTTCGTCGTCTTCGCGGCGCAGCTGGGTCAGTGGGAGATGGTGGAGGCCGCCGTCGGCAGCGTCGCCCATCTGTACCCCAAGCTGCGGGACTCCGGTCAGCTGGAGCAGCTTGATGATGATGTGCTCAACATGCTGCGGACAGAGTATGTCAGGTATTCACAGCACGGCGGTAGAAGTACCTGA</cdnaseq>

Protein Sequence

<aaseq>MRAAAAASKAAGKEKSRRKGGGGGAGGGGGEQLLTDQVLSLRARLHLALALGLAKSDGGPKKWQSTDAGIQSHVLKAASAFLGCLTNEMLRLPPIKESISDILIALEGILQSKNVSVLIQATDVSLKLVSSVGNLARQYPVLEIVTCLASQLSANQITIAVSSASTLNCILNTLATARSSIHAEIWEALEKTDAVTSVIGALQNYSPDVHPLNYLMEMMSLLRIILWIWPSSRYHVWSNCNLMGKLAQYCVASEMDVAVRVLKLYAALALCGNGAMVLLNNEDLMAKVGALLGKSNPSIARIEALKFYQILLRSSKGCDLLMAAHYQHIIEGTINAMSRDDERLLTIEGCRTALLVLRYAGDHHRLFWSHAIDDVLYKILTGGCTSSHKANQILCHDKLFNMVSENFMDIHSYVWDILGNLAVHCKNEYLSVRKGQDSALQALIHCICSLAADAMQKSNTMKLSKDVHEPALRAVLMMLLSPSGYILSEASSKLLHVLPLGDDCLNILFTSLESNTTRSITASFDNVKIMSNLMSLAGMVMLQPSNNSLNTRRAVAVLSTIIKECVHNNIHITRPKVVSHLQFCFEGGSCCNLVKEWEGENIALIYGLMVLFNLLKSINFVCIHCKRNLDVGIVCNDCRDHYSEGLIRVLQNASCQNLSPGPKLYISRILSLFGLCGFPSKLGGKMRRALDDNELADLELLLSNGESLKAHTAIISVRCPKLLPSAKSLGSDGKITDEWGRSFYHVRMSDRVDSCGLKKILEYTYTNSVMVDDDNIKPVRTLAKYCHLKSLQEMLQKEQPRWNSDCPRYDLTAALEPVKCSFSDIILEAQSNEEMKCYHGSCQLSTSHVHCHKIVLSMSCDYLRALFQSGMHESFSEVINVPLGWQALNKLIHWFYSGELPKIDPDCRWRNLNSEEQLSQLRPYAELSSLSEFWFLEGVKEESLSVVTSCLSSTSTAASVEFVVFAAQLGQWEMVEAAVGSVAHLYPKLRDSGQLEQLDDDVLNMLRTEYVRYSQHGGRST</aaseq>

Gene Sequence

<dnaseqindica>1..164#421..544#685..1201#1312..1442#1530..1936#2059..3183#3492..3644#3822..4266#ATGCGTGCGGCGGCGGCGGCCTCCAAGGCGGCGGGGAAGGAGAAGAGCAGGAGGAAGGGCGGCGGCGGAGGAGCAGGAGGAGGAGGAGGCGAGCAGCTGCTCACCGACCAGGTCCTCTCCCTCCGCGCCCGCCTCCACCTCGCCCTCGCGCTCGGCCTCGCCAAGTATAATTTCTTACTTTCCGATAATTACTTGCTCTTCAGTAGTCGCAGGCTAGCAGTAGGATCCCGTACGCGCCATTGATTTACTCTGGTCCTGTAATTTCTATAGTTTAGCTTGTTAAGAAAGGAGTTGCTTGTACTAACTAGGAGAAAGGGGAATTGAACACAAATAATCTGAAATTACTGTGTGAAAGTTCAGACGGATGGCGATTTTGCAAAGATGTACTCCATTTGATATCTTTGTGTGTATACTTGCCAGGTCTGATGGAGGTCCAAAGAAATGGCAGTCTACTGATGCTGGAATACAGTCTCATGTGCTCAAAGCAGCATCAGCCTTTCTTGGCTGTTTGACCAATGAGATGCTGCGGCTTCCTCCTATAAAGGTATACCTTGCTTTTGTCTGTATAGCCAACATGCTATAACCAAACTTCGATCTTCCTTCATGTATCTGCCATGTGATATTCTTGCTGGCCGGTGTGGTAGTGGTCGAATTCTGAGGACTGTTCATTTATCTGTTAACCAGGAGTCAATTTCGGATATACTCATAGCACTGGAAGGTATTCTTCAGTCCAAGAATGTGTCGGTTCTGATCCAAGCAACTGATGTTAGCTTGAAGTTAGTTTCCAGTGTAGGAAATTTAGCTCGCCAATACCCGGTTTTAGAGATCGTTACATGCCTCGCGAGTCAGCTTTCTGCAAACCAGATAACTATAGCTGTCTCATCTGCAAGTACATTGAACTGCATACTGAACACCCTAGCAACAGCGAGAAGTTCGATTCATGCAGAAATTTGGGAAGCTTTGGAGAAAACCGATGCAGTTACAAGTGTCATTGGAGCTCTGCAGAATTACTCCCCTGATGTCCATCCATTAAACTATCTGATGGAAATGATGTCTCTGCTAAGAATTATACTGTGGATTTGGCCTTCTTCGAGATACCATGTATGGAGTAACTGCAACTTGATGGGGAAGCTAGCACAATACTGTGTTGCCTCTGAAATGGATGTTGCTGTTAGAGTCCTCAAGCTATATGCTGCTTTAGGTACACCTTTCTTGGTAATTACCTTCTTTGACCTTTGTATTAGAATCTGCATAGATCTTTTTGCTATTCCTTTAGTTTCATCTTATCTTCCAAATCTTACTGTAATCCAGCTTTATGTGGGAATGGTGCAATGGTCCTTCTGAATAATGAAGACTTGATGGCTAAGGTTGGTGCGCTTTTGGGGAAGTCAAATCCATCTATTGCTAGAATTGAAGCATTGAAATTCTATCAGATTCTTTTGGTAAGAGAATTAAAATGTGACGATTAGTTAATACATTTTTTTTAAAAAAATATGCTGTAAGATTTGAAACCAAATTGTTATCTGCAGCGATCTTCAAAAGGGTGCGATCTGTTAATGGCTGCACACTATCAACACATTATTGAAGGCACAATCAACGCAATGTCTAGAGATGATGAAAGATTGTTAACAATAGAGGGCTGCCGCACTGCACTGCTGGTCCTTCGTTATGCTGGGGATCATCATCGGCTCTTTTGGTCTCATGCTATTGATGATGTATTATATAAGATTCTTACTGGTGGCTGCACCTCTTCACATAAAGCCAATCAGATTTTGTGCCACGACAAGCTTTTTAATATGGTTTCCGAGAACTTTATGGATATACATTCTTATGTGTGGGATATACTTGGAAATCTAGCAGTACATTGCAAAAATGAGTATCTCTCTGTTAGGAAAGGGCAAGACTCTGCCTTGCAGGCACTAATACATTGTATTTGGTAGGTACTAGGTATTAATATTTTCCCATCTTGTTATTCTTGCTATAATTTTCTCGAGTGCTATTTTGAACTTACAGATGACTTTCTGTATGCCGATTTACATTTTCTGTCCTCTTTTGCAGCTCACTTGCAGCAGATGCTATGCAGAAAAGCAACACCATGAAATTATCCAAGGATGTGCATGAGCCAGCTTTGAGGGCTGTTCTGATGATGCTTCTCTCACCCAGTGGATACATTTTGTCTGAGGCAAGTTCTAAACTCTTACATGTTTTACCTTTAGGTGATGACTGTTTGAATATTCTGTTCACGTCGTTAGAATCAAATACTACAAGAAGCATTACTGCATCTTTTGACAATGTCAAAATTATGTCCAACCTCATGAGCCTAGCGGGCATGGTGATGTTACAACCTTCCAATAATTCCCTTAACACGAGAAGAGCTGTAGCTGTACTATCCACCATTATCAAGGAATGTGTACACAATAATATACATATCACGAGGCCAAAAGTTGTTTCTCATCTGCAATTTTGTTTTGAGGGAGGTTCATGTTGTAATCTTGTTAAAGAGTGGGAAGGTGAGAATATTGCTTTAATCTATGGTCTCATGGTGTTGTTTAATCTGCTGAAGAGCATCAATTTTGTTTGTATCCACTGTAAAAGGAATTTGGATGTGGGGATTGTGTGCAATGATTGCAGAGATCATTATAGTGAAGGTCTGATTAGAGTTCTTCAAAATGCGTCATGTCAAAACTTGAGCCCAGGACCGAAGTTGTACATTTCACGTATACTGAGTTTGTTTGGCCTATGCGGTTTTCCAAGCAAGTTGGGAGGAAAGATGAGAAGGGCCTTAGATGATAATGAGCTAGCTGATCTGGAACTGTTGCTTTCAAATGGTGAATCTTTAAAAGCTCATACAGCCATCATTTCAGTAAGGTGTCCAAAGTTGTTGCCATCTGCAAAATCCCTTGGTAGTGATGGAAAAATTACTGATGAATGGGGCAGATCATTTTATCATGTTCGAATGTCTGATCGTGTTGATAGTTGTGGCTTGAAGAAAATTTTGGAATACACATACACAAATTCTGTCATGGTAGATGATGACAACATTAAGCCAGTAAGGACACTTGCGAAGTATTGTCACTTGAAATCATTACAAGAGATGCTTCAAAAAGAGCAGCCTAGGTGGAACTCTGATTGTCCTAGATATGATCTTACTGCAGCACTTGAACCAGTTAAATGTTCATTCTCGTAAGTTATTCCTATGATCGCTATTTTTATTGATTCCAACTTGTGAGCCAAAAGGCAGTCTGATCTGCCTTCAAAGCATTTTTGGTTATTCTTAGCCTAGTCTTAGTAATTTTTCATTCTCTAGCTACTTTTAAGAGTTTCTTTTTTTGTTTACTAGAGCATCAGAAGTCAGAGCAGATCACACAGCACATCAGAAGTCAGAGCAGATCACACAGCACCTTGCATATAAAACGGAAACCACCTTGCATTTTGTTCTGTCTAGTCTTGTTGACTTGTGTTGAAGCCCCACTGATCCATATTAATTCCAGGGACATAATTCTGGAGGCTCAGTCAAACGAAGAAATGAAGTGTTACCATGGCTCATGCCAACTCTCGACTTCGCATGTTCACTGCCATAAAATTGTACTGAGCATGAGCTGTGATTACCTTCGAGCATTATTTCAATCTGGGATGCATGAGAGGTGAGCCTTTTGTCAGTAACTTTCTACTTGCTGACAACCCATTACCCATGCTTGTTGGAACTGCAGCGAATTCTCAATTGTTATACTGTTTTAAAGAGCACCCTCGTGCATATTACTGGCACTTGTAATGCTATTTCACATATCCTCCAAATGATCGATAATAAACCATTCATGCAGCTTCTCAGAAGTTATCAATGTTCCACTGGGGTGGCAAGCGCTGAACAAACTGATCCACTGGTTCTACTCAGGCGAGCTACCCAAGATCGACCCCGATTGCCGATGGCGAAACCTGAACAGCGAGGAGCAGCTTTCTCAGCTGCGGCCTTACGCCGAGCTGTCATCCCTGTCTGAATTCTGGTTCCTGGAGGGAGTGAAGGAGGAGAGCCTGTCAGTGGTCACCTCCTGCCTGAGTTCCACCAGCACGGCCGCCTCCGTCGAGTTCGTCGTCTTCGCGGCGCAGCTGGGTCAGTGGGAGATGGTGGAGGCCGCCGTCGGCAGCGTCGCCCATCTGTACCCCAAGCTGCGGGACTCCGGTCAGCTGGAGCAGCTTGATGATGATGTGCTCAACATGCTGCGGACAGAGTATGTCAGGTATTCACAGCACGGCGGTAGAAGTACCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023455