BGIOSGA023459

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Revision as of 13:33, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023459| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023459, complete gene.| tag = B1153E0...")
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Gene Name

BGIOSGA023459

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023459, complete gene.

LocusTag

B1153E06.19

Ensembl Transcript ID

BGIOSGA023459-TA

Ensembl Protein ID

BGIOSGA023459-PA

Length

3618

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:29955978..29959595

Sequence Coding Region

29955978..29956025,29957047..29957499,29957674..29957848,29957944..29958238,29958401..29958473
,29958577..29958667,29959028..29959107,29959201..29959431,29959569..29959595

Genome Context

<gbrowseImage1> name=IndicaChromosome06:29955978..29959595 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:29955978..29959595 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACAAAGCGGAGGAGGGCCAGTCTTCGGAGCCCGCCGATTCCGCGGCACCAGCCCAGGATGACAGTGTGCAAACTGCATCTGGGCATAATTCGCGAAGGCCAAACCTTTCTTTGCAAATACCAGCTAGGACCCTGGATAACCAAATAGGCACTTCAGCGAGAATTAATATATCCCCTAGCCCCAGCTCAACGAGAGCAGGATTGCCCCCGAGGCCTAATTCAACTAGAACAAAATCTTCTCTGAAGAGCATCATTCCGCAACAGAGTTTCAGGGCGAGAAGTTCAGCACAGGAAGGTGATCGGGCGATCCTTCTGGTTCCTGGGACACCATCAGAAGGGCAGCAGGATAATACATCAACGTTGAGATCATTTTCTTTTAGAAAAGTCATAAACTCGTTATCCGCAAAACGTACACATTCTTTGCCAGTCACACCTATAGCAACTTCAGACAAAACTTCTTCTCCAGCAAATCAGATCAACAACCTACCAACCACAGATGATCAAGATGTTCAAGCAAGAATTAGGCGCTCACTTTCAGTACCAGGAAATCGTAAAAACAGGAGTTTGAGGAGGGCGGATTCATTAGGTGTCATCCGTGTGATTCCAACAACTCCCCGACCTATCCCAGTTAATACAACTGCATCAAGTGATGGGATTGAGGAGACAGTGGATGTTCCTGGAGATGGAGGCGAAGATATCCCTGAAGAAGAGGCAGTCTGCAGAATTTGTCTAGTTGAACTAAATGAAGGAGGGGAAACACTTAAAATGGAGTGCAGCTGCAAAGGGGAACTTGCTCTTGCACACCAAGATTGCGCTGTCAAATGGTTTAGCATCAAGGGAAACAAGATATGTGATGTTTGTAAGCAAGAAGTTCAAAATTTGCCTGTCACTTTGTTGAGAATACCAACTCAAACTGCTAATAGGCGAGTAACAAATGGTGCTCATCAAAGAGCCTCTCAACAATACAGATTTTGGCAGGACATTCCAATTTTGGTCATGGTTAGCATGCTTGCATACTTCTGCTTCTTGGAACAACTTCTGGTTACAGATTTGCGGTCACACGCACTGGCAATTTCGTTGCCTTTCTCATGCGTGTTGGGCCTCCTTTCTTCCATGATAGCATCCACCATGGTAACCAAGAGTTATCTATGGGCCTATGCTTCGTTCCAGTTTGCTATTGTGATACTGTTTGCTCATATCTTCTACAATGTGTTAAAAGTAAATCCAGTCCTTGCGGTCCTACTATCCTCATTCACTGGGTTTGGGATTGCTATCAGTGCGAACTCAATGCTAGTGGAATACTTGAGGTGGAGATCTAGGAGGAATCAACAGCTAGCTCAAACTGTCGATGATGGTCAGCGACAAGAACCTGAAAGTAATGCTGTAAATGAAAACAATGGTGATAGACAGCAAGCGCAGCATCGAGAATCTGGAGATAACATTATTAAGAAGCGCAATGAATGTGAATAG</cdnaseq>

Protein Sequence

<aaseq>MDKAEEGQSSEPADSAAPAQDDSVQTASGHNSRRPNLSLQIPARTLDNQIGTSARINISPSPSSTRAGLPPRPNSTRTKSSLKSIIPQQSFRARSSAQEGDRAILLVPGTPSEGQQDNTSTLRSFSFRKVINSLSAKRTHSLPVTPIATSDKTSSPANQINNLPTTDDQDVQARIRRSLSVPGNRKNRSLRRADSLGVIRVIPTTPRPIPVNTTASSDGIEETVDVPGDGGEDIPEEEAVCRICLVELNEGGETLKMECSCKGELALAHQDCAVKWFSIKGNKICDVCKQEVQNLPVTLLRIPTQTANRRVTNGAHQRASQQYRFWQDIPILVMVSMLAYFCFLEQLLVTDLRSHALAISLPFSCVLGLLSSMIASTMVTKSYLWAYASFQFAIVILFAHIFYNVLKVNPVLAVLLSSFTGFGIAISANSMLVEYLRWRSRRNQQLAQTVDDGQRQEPESNAVNENNGDRQQAQHRESGDNIIKKRNECE</aaseq>

Gene Sequence

<dnaseqindica>1..48#1070..1522#1697..1871#1967..2261#2424..2496#2600..2690#3051..3130#3224..3454#3592..3618#ATGGACAAAGCGGAGGAGGGCCAGTCTTCGGAGCCCGCCGATTCCGCGGTGAGGTTCTCCCACCCCAAGCAGCTCGACTCGCGTTTCTTTCCCCCGACTTTCCATGTTCTTTCTAGGATAGTTTTCGAGTAGTTCAACTTCTGATGGTTTCTTGGTTCCGTATGGGGGATGGCGAGACAATCTGTTCAGACCTGTTATCGCTGGGTGTTGCAGTTTAAATCCGTCTCTTAATTTCGTTGATCAGAGGCGAAAGTTGCGAAGCTTTGAGGGTGAATTGTGGCGGAGTTGGTGGAATGTTTGTGGATGCTCTTTTGCCGCATCTTTTTTTTATTCTCTTTTTTGGAAGATTTGATTTTTTAGGGAAGATCGAATGATTTGTTTCTTGCTTTTTCCCTTTATTAGGGCAGGTTTCCTCGATTGTAGTGAAAAGCTCGTGTTTGCCTACCCTGGTTTTCCTTGTACTTTGTCACATGAGCTAAAATTATACTAGATTCTACAGTAGTAGGTTTGCTGGCCTTTCTGACGAAATTGCATCACTGAAGTGTATTGCTATAAGTGTGATTATGTGGGTGCTAATCTTGATTTCTTCTTGTGAAAATGCGTTTTAAGTTTGTTGGATACATAGTCTTAGGATCGGGAGACCAGTTGTTTGTAATTCCGTCACACAAATTATCTAGGTTACAGCTAATCCAAGCAAGGTAAGATTGGTAATGATATGTTCAGTTAGGTAGGTAGAGAATGAAGTAGGATGGACAGTAGAGATCATAGCTATGTTTTCGTCAAATTCTTAATGTGCGAATTTGAAGTTTTGGACTCAATGGAATAAATAAAGCCCTAAACAATTGACCCATAAGGCCATAAGGTACATGTCTGCTGGTGCTACTCCATGTATGCTCGGTAGCTCAGATGAGTGCCATGAGCTTCATTAAATTGTATCGGCTCAAGAATCACTATTTATCCCTGATGATTGATGCCTTTACCTTGTTCATATTCCATTAGTCTTGCAAGTTTAATTTAATGGAATTTATGTAGCATAGCTTGCTGATAATACTGTTTGCTGACTTTGTAGGCACCAGCCCAGGATGACAGTGTGCAAACTGCATCTGGGCATAATTCGCGAAGGCCAAACCTTTCTTTGCAAATACCAGCTAGGACCCTGGATAACCAAATAGGCACTTCAGCGAGAATTAATATATCCCCTAGCCCCAGCTCAACGAGAGCAGGATTGCCCCCGAGGCCTAATTCAACTAGAACAAAATCTTCTCTGAAGAGCATCATTCCGCAACAGAGTTTCAGGGCGAGAAGTTCAGCACAGGAAGGTGATCGGGCGATCCTTCTGGTTCCTGGGACACCATCAGAAGGGCAGCAGGATAATACATCAACGTTGAGATCATTTTCTTTTAGAAAAGTCATAAACTCGTTATCCGCAAAACGTACACATTCTTTGCCAGTCACACCTATAGCAACTTCAGACAAAACTTCTTCTCCAGCAAATCAGATCAACAACCTACCAACCACAGATGTAAGTATATACATTTTTGTTCTGCATTTTTTATAAGAATTCCAGATAGATGGTACAGCTAGATAGTAGTATTTTCATGCTACCAGTCGGAAATGGGCTTACTGCCTTACAGTATGTTGCGCAAATATTTGTAGTTTTACTAAGTTTTCTTTAAATGGTTTATGATGTTTGCAGGATCAAGATGTTCAAGCAAGAATTAGGCGCTCACTTTCAGTACCAGGAAATCGTAAAAACAGGAGTTTGAGGAGGGCGGATTCATTAGGTGTCATCCGTGTGATTCCAACAACTCCCCGACCTATCCCAGTTAATACAACTGCATCAAGTGATGGGATTGAGGAGACAGTGGATGGTATCTTCACTTCTAAGACTTTACTGCATCATTTTAATAGGACAAATTGTTTGCTTCTGAAACAGAATTGGTTCATTTTACTGAATTCTTGACAGTTCCTGGAGATGGAGGCGAAGATATCCCTGAAGAAGAGGCAGTCTGCAGAATTTGTCTAGTTGAACTAAATGAAGGAGGGGAAACACTTAAAATGGAGTGCAGCTGCAAAGGGGAACTTGCTCTTGCACACCAAGATTGCGCTGTCAAATGGTTTAGCATCAAGGGAAACAAGATATGTGATGTTTGTAAGCAAGAAGTTCAAAATTTGCCTGTCACTTTGTTGAGAATACCAACTCAAACTGCTAATAGGCGAGTAACAAATGGTGCTCATCAAAGAGCCTCTCAACAATACAGGTAAACGTGCTTTAGCTGTCTTGATTTATGAATTGTTGAAAAAGGAAGTACTGTTTTCAAATTATTTTTTTTCGTGGTAGATTCACTCTTGAAAAAAATAAATAAATAAGCATTCTGTGATCATTTTGCACGGTTGTGAAATTTAACTTTCAGTTATAACAGATTTTGGCAGGACATTCCAATTTTGGTCATGGTTAGCATGCTTGCATACTTCTGCTTCTTGGAACAACTTCTGGTTAGGGTCTCATTCTTATTTATATGCATGCAGAATGTCCCACTCTGCTTTTTCTTAGCTTGTGAAACCTCTCTAAATGGTGTTGATTCTTTAACTGAAACAGGTTACAGATTTGCGGTCACACGCACTGGCAATTTCGTTGCCTTTCTCATGCGTGTTGGGCCTCCTTTCTTCCATGATAGCATCCACCATGGGTAATGCACTGTCATCTTTACCGTTCAAAATTATTGTAGTTCGCACTTACAATGCCATAAGAGTAGTTAATGTATAGAGAAACTAAGGGCATTTCAAGCTTTCAGTATTTAATAAGTGGTAGAAGACCTAAACTGTAGTAATCACCCACTGTTCAGGTCTGTAGTCTGTACTCCAAATTTTTATCTAGTTTGTTAACTTGTGTAGTGAGTTCAAAACTTGTAATAGGAAAATAATGGTAGTTTAAACGATTTCAGTATTTCTGCAGAAGTAAATTATACCTACAAACTTAGGGTTCATTATTTGTTGCCTTTGGACTCCTTGCAACCATGACAATCCGGTATTTCTTTTTGTCCGTACAGTAACCAAGAGTTATCTATGGGCCTATGCTTCGTTCCAGTTTGCTATTGTGATACTGTTTGCTCATATCTTCTACAATGTGGTAAGAAATTATTTCCCATGATTACATTTGATGCAGCTAATGTATTTCATCACTCTGCTCATTATCAATTTATCATCATCTTAAAACTTGCAGTTAAAAGTAAATCCAGTCCTTGCGGTCCTACTATCCTCATTCACTGGGTTTGGGATTGCTATCAGTGCGAACTCAATGCTAGTGGAATACTTGAGGTGGAGATCTAGGAGGAATCAACAGCTAGCTCAAACTGTCGATGATGGTCAGCGACAAGAACCTGAAAGTAATGCTGTAAATGAAAACAATGGTGATAGACAGCAAGCGCAGCATCGAGAATCTGGAGATAACATTGTATGACAATTCAGGTTTGTTATTTAAGACATTTATCAAGAATCTAAGACATATTTATCACATTTTTAACAAGAGACGAAAACTTCCACTGATATTTATGCATATCCTCACTGGGCTTTCGCTGTTGAATTGTGCAGATTAAGAAGCGCAATGAATGTGAATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023459

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA023459&oldid=45984"