BGIOSGA023462

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Revision as of 13:33, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023462| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023462, complete gene.| tag = OsI_241...")
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Gene Name

BGIOSGA023462

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023462, complete gene.

LocusTag

OsI_24157

Ensembl Transcript ID

BGIOSGA023462-TA

Ensembl Protein ID

BGIOSGA023462-PA

Length

5873

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:29973690..29979562

Sequence Coding Region

29973690..29973832,29974379..29974804,29975783..29975945,29976041..29976151,29976665..29976733
,29976887..29976973,29977737..29978353,29979547..29979562

Genome Context

<gbrowseImage1> name=IndicaChromosome06:29973690..29979562 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:29973690..29979562 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGGGGGAGGCCTGCGGGTTCCTGCACCAGTTCGACAAGGCCCGGATGCCCGTGTGCCGCTTCTTCCGCGACTTCGGCGAGTGCCGCGAGCCCGACTGCGCATACAAGCACTCCTACGACGATGTCAAGGAGTGCAACATGTACAAGATGGGCTTTTGCCCTAATGGTCCTAATTGCCGGTACAAGCATGTTAAGCTACCAGGGCCACCACCTCCTGTTGAGGAAGTTCTGCAGAAGATTTTGCAGATTCGCTCTTTCAATAAATTCAATCAGCATAGGCACAATAACTATAATCAGCAAGGGGAGAGACCTCAACATCCACAGGGTTCAGGTTTACCTAACCAAAATAGTATAGATAATACTACAACCACAACCGCTCAGCCTGCTGTTGGACAGCAAGCACAAACTACAAATCAACAGCCACCACAGCAGCAGCAGCAGCAGCAACAACAACAACAACAACAACAACAGAAGCCAAATACAAATGACCAAGTCCAATCTGTTCCAAATGGCTCGTCGAATCAAGCCACTAGAATTGCAACGCCCCTTCCACAAGGGCCATCTAGGTACTTCATTGTCAAGAGTTGCAATAGGGAGAATCTGGAGATATCAGTTCAGCAGGGCATTTGGGCTACCCAAAGGAGTAATGAGGCTAAACTTAATGAAGCCTTTGAATCCATTGAGAATGTTATTTTGATATTCTCAATCAATAGAACTCGTAATTTCCAGGGTTGTGCAAAGATGACTTCTAGGATTGGTGGCTACATTGGTGGTGGAAATTGGAAATCTGCTCATGGAACGGCACATTATGGTCGGAACTTCTCCATACAATGGCTTAAGCTCTGTGAACTGTCATTTCAGAAAACACATCATCTGCGCAATCCATACAATGACAATCTCCCCGTTAAGATCAGCCGAGATTGCCAGGAATTAGAACCCTTCATTGGTGAGCAATTGGCTTCACTGCTTTATCTAGAACCAGACAGCGAGCTGACGGCTATACTAATTGCAGCGGAGGCCAAGAAAGAAGAAGAAAAGGCTAAAGGAGTTAGTGCTGATGAGGCAGCTGACAATCAAGATATTGTGCTGTTTGATGACAATGAAGAAGAGGAGGAAGAGGAAAGCGAGGAGGAAGAAGAGGGCAATGGCCAAGAATCTCAAGGAAGGGGAAGAGGAAGAGGGATGATGTGGCCACCTCAAATGCCAATGCTGCGTGGTGTTGGGCCAATGATGGGAGGGCGTGGCTTCCCTCCCAACATGATCGGCGACGGTTTTAGTTTTGGTGGTGGTTTTGGTATGCCTGATCCTTTTGGTGTGCCTCGTGGTTTTCCTCCATTTGGCCCAAGATTCCCTGGTGACTTCGCTAGAGGAGGTCCTATGCCTGGTATGGTCTTCCCCGGCAGGCCCCCACAACCTGGGGGCATGTTTCCTATGGGGCTAGAAATGATGATGGGTCCTGGTCGTGGACCGCTAATGGGAGGCTTGGGAATGGGTGGGCCTGGACGGCCAAATCGACCCGTTGGTATGGCTCCCTTCATGCCCCCAACAACTCCACCAAATAACCGTGGCACGAAGCGGGAGCAAAGAAGGGCAGGTGGTGAGAGGGGTGACAGACTATCTCCAGGTTAG</cdnaseq>

Protein Sequence

<aaseq>MKGEACGFLHQFDKARMPVCRFFRDFGECREPDCAYKHSYDDVKECNMYKMGFCPNGPNCRYKHVKLPGPPPPVEEVLQKILQIRSFNKFNQHRHNNYNQQGERPQHPQGSGLPNQNSIDNTTTTTAQPAVGQQAQTTNQQPPQQQQQQQQQQQQQQQKPNTNDQVQSVPNGSSNQATRIATPLPQGPSRYFIVKSCNRENLEISVQQGIWATQRSNEAKLNEAFESIENVILIFSINRTRNFQGCAKMTSRIGGYIGGGNWKSAHGTAHYGRNFSIQWLKLCELSFQKTHHLRNPYNDNLPVKISRDCQELEPFIGEQLASLLYLEPDSELTAILIAAEAKKEEEKAKGVSADEAADNQDIVLFDDNEEEEEEESEEEEEGNGQESQGRGRGRGMMWPPQMPMLRGVGPMMGGRGFPPNMIGDGFSFGGGFGMPDPFGVPRGFPPFGPRFPGDFARGGPMPGMVFPGRPPQPGGMFPMGLEMMMGPGRGPLMGGLGMGGPGRPNRPVGMAPFMPPTTPPNNRGTKREQRRAGGERGDRLSPG</aaseq>

Gene Sequence

<dnaseqindica>1..143#690..1115#2094..2256#2352..2462#2976..3044#3198..3284#4048..4664#5858..5873#ATGAAGGGGGAGGCCTGCGGGTTCCTGCACCAGTTCGACAAGGCCCGGATGCCCGTGTGCCGCTTCTTCCGCGACTTCGGCGAGTGCCGCGAGCCCGACTGCGCATACAAGCACTCCTACGACGATGTCAAGGAGTGCAACATGTGAGATCCTCGATCCCCCAGATTTCGTTTTGCTATGTTATAAGTTTTTAGCGTATCTTTGATCCAGGGGTAAGATATTCATCACTGTGAATGATTCGTTTGTTAGCTCTTGGGTTGGAGGTCTTGTGTAGTTGACGAAATTTTTGGGTGGAATTTAGCAAGTGCGATCTCTTAACTTGGCCGCGATTGAGTCTGCGTGTCTTTGTGGTTGTCAACCTGGCTGTCAATGGGTATAATCACCTATTGATTCTCTGTTGTTTGATTCCATTTGGTAGAGTTTAGTGAACTCGGTTTGTTTTCTCATTGTTGCTGATAGAAGCTTACTTTCAAGATACTATGGAAATGCCATGTAGTTGACATTTTGTTGCAATGTAAATAACCATATCATTTATGGAACATGGTAGAGTGATAGATGATGGAGCTGTCATACAGATGCACCATCACAGAAAAGGAGTTTGTTTATTGTGGTAGTCATGTGTTTAAATGAATATGATGTTACTGAAAAATATATCTGACACTTATATGTTAACCTGTGCTGCTTTGCAGGTACAAGATGGGCTTTTGCCCTAATGGTCCTAATTGCCGGTACAAGCATGTTAAGCTACCAGGGCCACCACCTCCTGTTGAGGAAGTTCTGCAGAAGATTTTGCAGATTCGCTCTTTCAATAAATTCAATCAGCATAGGCACAATAACTATAATCAGCAAGGGGAGAGACCTCAACATCCACAGGGTTCAGGTTTACCTAACCAAAATAGTATAGATAATACTACAACCACAACCGCTCAGCCTGCTGTTGGACAGCAAGCACAAACTACAAATCAACAGCCACCACAGCAGCAGCAGCAGCAGCAACAACAACAACAACAACAACAACAGAAGCCAAATACAAATGACCAAGTCCAATCTGTTCCAAATGGCTCGTCGAATCAAGCCACTAGAATTGCAACGCCCCTTCCACAAGGGCCATCTAGGTGTGTGTGGAGTTTCTAGTAAATATTGTAAAGCTTCTAGCATACTCTGAAAATGATACACGTAGTCTCAGACTCTCAGTTACGATAGAACATAGTATTAAACAGCAAATATGTTATCTCTTCTGACATTTGGTAATAAAATGTACTTATTTGTGAAATCTCTTTTTGCATTCTCCTAGACAGACTGATAGCAAAATGTTGTGATCATCTTTTTGCTAATTACACAAGTTGCTAGTTATTATCATTTCTTTTTCTCGGTACTGTTAACTAGTTGTAGCTACCTCAAGGTTGGTTCCACATTGTTTAGCACTTTAGAAGAAGTGTGCTTCCTATCAATCTATCATTGTTGCCAAGTTTAAACTTTGTATAGTAGGATTTCATGATGGGAAGTTTGAGTACGGATACCACATGAAAGTTTCATAAACAGTTAGTTTTGAAAAAATATGATCTGGTAAGCCATAGCATGCCGTGTCCATGGTAGTAGCAAGCCTCGGCAATTTCTGGAGGGAATATACATTTTACTTTGACCTATGGAATTTAAATGTTGTATGCTTTAGTTCAAATTAGTGCTTGTGTTGTTCTCAGATTGAACCAACTATGTAGTTATTTGGTTATTAGCTATTACACTGATGCTGGTGTAGATTTTGGCAGCCTATATTTATAGTCTTTCTGAGTCTCTCGACAATGTGCTTTAGTACTTAGAAATCCAACATCTCATGCAATGTCTAAATTGTCAATATTGCAAAACCAACAGCTTTCACTTGCTACTATCCTTGTGGCCAAATAATTGTTAGTATTTTATTACCTAATGTTTTGTATAGTTAAAGGTAGCATTCACCCTTATCTTGGTACTCCCATCGGGAATAACTTAATGCTTTTCCAGCTAGAAGTTCTGCTTGATTGTTTCATGGTGTCAAGTGTCTTCTGGTACTATAATAGTTCTCTAATCAAGTCTTTGGTTGGTAATGTAAAAATCAGGTACTTCATTGTCAAGAGTTGCAATAGGGAGAATCTGGAGATATCAGTTCAGCAGGGCATTTGGGCTACCCAAAGGAGTAATGAGGCTAAACTTAATGAAGCCTTTGAATCCATTGAGAATGTTATTTTGATATTCTCAATCAATAGAACTCGTAATTTCCAGGTAAAGTGGAGGTTTCATTTTCCCTATGAATATTGAATGTGTATTGGGAATGACAGTTTGAAGTCATACTACTTAACCATGTTATGTTTTTCAAGGGTTGTGCAAAGATGACTTCTAGGATTGGTGGCTACATTGGTGGTGGAAATTGGAAATCTGCTCATGGAACGGCACATTATGGTCGGAACTTCTCCATACAATGGCTTAAGGTACACCTTTCTTTGTACTACTGTTTTTAATTGTAGCTCATGGAACATAGGGCCTTAGTTATGATAAAGCAAATTATATGGTCGTGAATTGTTATCACACTACATAGAAATATGGTCCTCATAATTTTGATAACGCTAGCTGGTACTGCTAAAGATACAATACTAGCTTAACTAAATTTCCCTCCCGGATATTTTAAACTGCTGAGACAAGATTATGAAGATGTTATTACTGAGCAAATATCAAATATCTATGGTCTTCATTAGCTTGCTATGAAATGCTTTAGGTTCAGATTATCTATTCATAATGGATATTCTGTCCGTTCATTTGACAGATAAATAGCTAGATCTTTTGTTGGCTTTAGCCCTTTCAAAGTTTCTAGCATGTTGATGAATCTTATATTAAACTGTTGATTGCAATGGTGTCTATTGATTTATCTTGTATCTTTTATACGTGAACATATTATGTTTTCTATCATCATTGTGCATCTGTTTACAACAGTTTTTGCACTGCAGCTCTGTGAACTGTCATTTCAGAAAACACATCATCTGCGCAATCCATACAATGACAATCTCCCCGTTAAGGTATGGCGCATCACTAACTAAATGCTACTTCTGTATATGATTATGGAAGAAAGTTATGCAATGGTGTGCTCCTTAGGTTTCAGCATGTAATTCTTCATCCAAATCCTTGAGAGTTCATGACTGAACTGCTTAATTCACTTTTGGCTTATGCAGATCAGCCGAGATTGCCAGGAATTAGAACCCTTCATTGGTGAGCAATTGGCTTCACTGCTTTATCTAGAACCAGACAGCGAGCTGACGGTATGCCATGCATTTCTTAATTTTTATTAAATCAGAATTTCATACTAAATTATTATGGCGAACATCTCTATATGCATTAGCTTCCTTTTTTCTTGTGGGCATTCCTCCAGCTTACACCATTGCAGTTAACACCACAATTGGGTTACACATGACTTTGCTTTGGGCTAATATCCTGCAATAATGATCATGGTTCTAAATTGCAGATATGTAGAAAAAATCCGTACTGTAGTATCGTTTGCTGTTGTCAAGTCAATGCCTGTTGATGTGTTGTCACACTTGTGATGTACTTCTTAGACTAATCCAATCATGATGAAGGAACCATAATTCAAAAAACACCACCATATTTAAGTTGTCAGAATTGTTTTGGAAAGAAATAGAGGGCAAAGACACAGCAATTATTATCTTGCAGTGTTAAGGAAAGATAACAACTGCATCCTCTAGGTTGACTAAAATTTAAAGGACGATTTGCTTGCATTTAGTCAGATAGGAATTACCTTTGGGTTCAGAACACACTCTCTTATAAAGATAAACTGCAATAGCAAGTTTTATGGTTGCCGTACTGTTTTACTGGAAGAAAGATATTGTGGTAAAGTGAATAATTGTTATTATGATCTATCTTGAGCTGACTGATTCCTTGTCTAAGGCGTAAATGATTTATCTACTTGCTTTTAAAAACATTTTTCCATGTACTGCTTTTTCTTATTTTGACCTATTGAGGTGATGTAATGCCCACCGCTGGCTGATATTTCGAATCTTGGTTTAGGCTATACTAATTGCAGCGGAGGCCAAGAAAGAAGAAGAAAAGGCTAAAGGAGTTAGTGCTGATGAGGCAGCTGACAATCAAGATATTGTGCTGTTTGATGACAATGAAGAAGAGGAGGAAGAGGAAAGCGAGGAGGAAGAAGAGGGCAATGGCCAAGAATCTCAAGGAAGGGGAAGAGGAAGAGGGATGATGTGGCCACCTCAAATGCCAATGCTGCGTGGTGTTGGGCCAATGATGGGAGGGCGTGGCTTCCCTCCCAACATGATCGGCGACGGTTTTAGTTTTGGTGGTGGTTTTGGTATGCCTGATCCTTTTGGTGTGCCTCGTGGTTTTCCTCCATTTGGCCCAAGATTCCCTGGTGACTTCGCTAGAGGAGGTCCTATGCCTGGTATGGTCTTCCCCGGCAGGCCCCCACAACCTGGGGGCATGTTTCCTATGGGGCTAGAAATGATGATGGGTCCTGGTCGTGGACCGCTAATGGGAGGCTTGGGAATGGGTGGGCCTGGACGGCCAAATCGACCCGTTGGTATGGCTCCCTTCATGCCCCCAACAACTCCACCAAATAACCGTGGCACGAAGCGGGAGCAAAGAAGGGCAGGTGGTGAGAGGGGTGACAGGTATGAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATATATATATATATATATATATATATATATATATATATATATATATATATATATGAGGTGCCAACTTCAATTCTTCAAATGAATCTCGAATAAACCACTCGAAATGCGTCTTGAGATCTCATTTAATTTCGTGCGGTGTTTGAGACGCTGGAAATTTATTTGCGAGAATCATGCGGGATCTCGCGAAACTGCCCAGGGTCAAATTCAAATGAAACTGTTACTATTTTAAACTGGAATTTTAAATTGACCATATGCGCAAAGGGGGAATTAGCTGTCCCTTGCACACGTAAAGTATCGATCGATCAGTTCACTCACTATGATGATACTCCCTACTATGTTTCTTATATGATTTTGGTTAGATGTAACATATCATAATATAAGCATGTTCAGATTTATTCTACTAGAATGTGTCACATCTAACTAAAATCTCTTATATTTAGAGAAAGAGGGAGTATTACGTTTCACGCTTTAATTTGGCTCCGAGTGAAAAGACTAGATTTTGTCGCTTAATTGATGATCAACAAAAAAAAATTGCCACAGAATAAGAAAAGGTGAGCGTGACATTTTTTTTTAGCTACCTACTGTCTCCATCCCAAAATAATTAAATAATTATAGTTCTATAACATTTAGTATATATTAAGGTTTAAAAAGAAAGACTATGATATCTCTTATTAAATGGTGTATAGGTAAGAGTGTAAGGGTGGTTAAGTGTAAAATAGGAAATTTTGAATGAGAAATAATTAATAAGACCATTAGTATTTTATTGTGACATTCTAGAAGAAATACAAATAAAAAATATTATTATTATGTGACAGAGATAATACTTGCGTGCGGTGGCTCCAGAGTCAGAAAACGAAAAGAAACCAATCTGATCACATGCTTGATTCTATCTCATAATGCTTAAAGCTCTCTCATCATGCAAGTGTCCAGTTCTGTAGCTCCACTGGATAATATAAGCGTTCATTAATTGAGCCAAAAGACGATCAATTAGAGCACCCGCAATAGTAAAGTAAGGTGCTATCTATAAAACATGTACATCTTAGCAATAGACTAGATTAATAGTAAACCATCTCAATAGTATGTCTACATGAGTATCTATAGCTCTCTAATGCATTGCCTTGTTTTTCTCTATAGACTATCTCCAGGTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023462