BGIOSGA023515

From RiceWiki
Revision as of 13:33, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023515| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023515, complete gene.| tag = P0532H0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA023515

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023515, complete gene.

LocusTag

P0532H03.40

Ensembl Transcript ID

BGIOSGA023515-TA

Ensembl Protein ID

BGIOSGA023515-PA

Length

3421

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:30872097..30875517

Sequence Coding Region

30872097..30872158,30872219..30872525,30872876..30872928,30873222..30873307,30873922..30874103
,30874180..30874381,30874622..30874853,30874941..30875094,30875173..30875517

Genome Context

<gbrowseImage1> name=IndicaChromosome06:30872097..30875517 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:30872097..30875517 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGAGCGGCCTGTGGGGCGCGCTCGGGCAGGCGTCGAGCGTGGCGCAGCTGGTGGGCGTGGACGCGTGCCGGCGGTTGGGGCAGCACGTGGAGCTCGTCGGCGGCCTGCTGCGGGAGCTCGAGCTCGCCGAGCTGATGCGGCGGGAGGCCACCAGGCGGCCCCTCGAGCGGCTCCAGGGCGCGCTGCGGCGGTGCTACGCGCTCGTCAGGGCGTGCCAGGAGGACTGCGGCTACCTCCACCGCCTGCTCCTCGGCGCCCGGATGGCCGACGAGCTCCGCGCCGCGCAGCACGAGATTGACATGTACATCCGCCTCATCCCTCTCATCTCTCTCGTCGACAGCAGCAACAATAATCGTCGTGTCACGGCAACCGAGGGTGTGCCCAGTGTAGTCCCAAGTAGTTCAGATCATCACACAAGGTTTCCAAGAAGAGTATTGGCGTTCACTGAAATACATGTTCAAGGAGCCACCAAACCTAGGGAAATTGGGGGGAAATCATTAGAAGTAACAGTGGACAAGCAAGAACAGAAAATAATGGACATGGAGGAAATAATGAAACTTTGTATCCAAACTGAAGAGAACTATCCAGGATTTAGGAAGTTTGGTTTCTTTCAGCTTGTGGATGCTACAGATGGTTTTTCAGAGAACAGAAATGTCGGAATTGGTGGATTCGGTACTGTTTACAAGGGCCAGCTACTTGATGGACATACAGTTGCTATCAAAAGATTTGTTGTGGATGCAGCAATATTTGATTTCAAAAGTGAATTGCAGCTTGTAAGGCTTCAGCATACCAACCTAATTAGGTTATTGGGATGGTGCATTCATGAAAAAGAAAAGATTCTTGTGTATGAGTTCATGCAGAAAGGCAGTTTAGACAATATTATCTTCCATAAAAGGAAGGGCGCATTGCTAAATTGGTCTAAGCGACTTCAGATAATTAAAGGGCTAGCTGAGGGGCTTCTTTACCTGCACAAGCACTGTTTGATTGTACATAGGGATTTGAAACCAAATAATATCCTCTTAGACCATGACATGAACCCAAAGATTGCTGATTTTGGATCTGCGGTAACACTGGTTTCAGATGTAGCAGAAGAGCGTACAAGGAGAGTCATGGGAACCAGTGGTTACATAGCTCCTGAGTATGCATCGGAAGGCCGTTATTCGCTTAAGACAGACGTGTTTAGCTTTGGCGTCGTGGTTCTAGAAATCATTAGTGGACGAAAGAATTTCATAATGGAGAAACAAGGGGATACCGTTGGCAATCTCATTCGAGACGCATGGCATATGTGGAGAGATGGAAGGTTGCATGAGCTTGTAGACCCAGCATTGTGTGATGAATATGAAAGCCCTGTGATAATGCGATGCACTCAGGTGGCGCTTCTTTGTGCTCAAGAAGATCCAGCAGATCGGCCCACAATGACAGATGTTACTAGAGTTCTGAACTCTGAAAGCATACTATTATCAGATCCAAAGGAGCCAACTGAGCTAACTGATGGAGGTGCTAGTATTGACAGGCCATCGACATATATTGGCCAGTCGAGCAAGACGATAGACATAACCATCACAAGTTCAGCTCCGGTGTCCACCAGAGTTCGCATCATTGTTGACCCAGAAATTTGA</cdnaseq>

Protein Sequence

<aaseq>MASGLWGALGQASSVAQLVGVDACRRLGQHVELVGGLLRELELAELMRREATRRPLERLQGALRRCYALVRACQEDCGYLHRLLLGARMADELRAAQHEIDMYIRLIPLISLVDSSNNNRRVTATEGVPSVVPSSSDHHTRFPRRVLAFTEIHVQGATKPREIGGKSLEVTVDKQEQKIMDMEEIMKLCIQTEENYPGFRKFGFFQLVDATDGFSENRNVGIGGFGTVYKGQLLDGHTVAIKRFVVDAAIFDFKSELQLVRLQHTNLIRLLGWCIHEKEKILVYEFMQKGSLDNIIFHKRKGALLNWSKRLQIIKGLAEGLLYLHKHCLIVHRDLKPNNILLDHDMNPKIADFGSAVTLVSDVAEERTRRVMGTSGYIAPEYASEGRYSLKTDVFSFGVVVLEIISGRKNFIMEKQGDTVGNLIRDAWHMWRDGRLHELVDPALCDEYESPVIMRCTQVALLCAQEDPADRPTMTDVTRVLNSESILLSDPKEPTELTDGGASIDRPSTYIGQSSKTIDITITSSAPVSTRVRIIVDPEI</aaseq>

Gene Sequence

<dnaseqindica>1..62#123..429#780..832#1126..1211#1826..2007#2084..2285#2526..2757#2845..2998#3077..3421#ATGGCGAGCGGCCTGTGGGGCGCGCTCGGGCAGGCGTCGAGCGTGGCGCAGCTGGTGGGCGTGGACGCGCTGGGGCTGGTCTCCATGGTCGTGCAGGCGGCGCTGGCGGCGCGCCGCCACCGGGACGCGTGCCGGCGGTTGGGGCAGCACGTGGAGCTCGTCGGCGGCCTGCTGCGGGAGCTCGAGCTCGCCGAGCTGATGCGGCGGGAGGCCACCAGGCGGCCCCTCGAGCGGCTCCAGGGCGCGCTGCGGCGGTGCTACGCGCTCGTCAGGGCGTGCCAGGAGGACTGCGGCTACCTCCACCGCCTGCTCCTCGGCGCCCGGATGGCCGACGAGCTCCGCGCCGCGCAGCACGAGATTGACATGTACATCCGCCTCATCCCTCTCATCTCTCTCGTCGACAGCAGCAACAATAATCGTCGTGTCACGGTAAGCCCTTGTTTCATCCTTTTTTCTAGTAATAAGATAATTTGGTGGTTCATCTTAAAACTGAAGATTATGGCGTATCGAGATGGAGGAGAAATTGCTGATCTCTTTTTATGATGATTCATCTGATCGAAGTGATATGCTCAAGTGATCCTTCCTGTCAATGTTTCTGTTGTGCACTTGTACCTGAATTGGGGTACATAGCCATTTCAACTTTTAGTCAAACAACTTGACATGTACTAACTGTTAGTTCTGGAGCATAAGATTTTCCTTACTTGTGCACTGTTAGTTCCAAAAGTCCACTTTGTGTGCAGGCCAATTTCATGTGAATGATATCTGCAGTTGTCTAGCAGGCAACCGAGGGTGTGCCCAGTGTAGTCCCAAGTAGTTCAGATCATCACACAAGGTTAGATATTGTTTCAGTACCCCATAACTGATTACATAATGTTTCTTTCCATATCAAATCCGGGAGCTGATGTCCTTATCACGGTTTTTGGGAAAAAAACTGTCAACATTGAAGGCGAACTATCGCCGATATTGAATATTTTCATGCTGGAACCAGAGAATCATTGACCATATCTGGTCTATATTTATTTATATTCAAAACTCAGTTGTTATGACTACCACTTTGTTAGGGCTGAAATGAGAACCCTCTTTTCATGATTCTAGCATATAATGAGTATATTTGACCAATCTTAGGTTTCCAAGAAGAGTATTGGCGTTCACTGAAATACATGTTCAAGGAGCCACCAAACCTAGGGAAATTGGGGGGAAATCATTAGAAGGTGACTACTTTTATGAGTTTCCTGCAGTTGTTAATTATGAATTGAAAACCACATTGCAATAAATGTTTTTATCATCAAGAACATAATCTTATGTTCCATTTGTCGCTGTAACAGTGTACTTTATTTTTATAAATGTAACAGTGTACCGCTGATGCTTAGAAAATGCGTTGGAAGTTGGAACAGAGAAAATCCCCACTCCATTTTAGTCGTCCATCGTAGCATCATGACTTGTGACCAAGTGTTGGCTATTTGTATCACATCATAGCACTGCAATGTAGTTAAAAATGACTAAGCACACTTTGTACAAGAATAGCAGCTAATGTGCAACATCAGCTTCATCTAACAAAAAGCAGAATTTCAGCAATAAGAAGCATACAGATGCTAAAGATATTATACATTTTTTACACTTCGTGAAGTAGATAATGTGCATGATGAATATCATTTGTTCTCATTAAGTTTTATCTTTTGCACACTATCTTACATAAGTAATATATCTTTTGCACATCATGAAGTCACTAATTATTGTACAAAGAAGTCGAGTATTTCTCATTTTTAGTTATTGAACTTTTGTCCAAATTCCGTTGGTGACATGAGGTCATTTACCACTCATCCAGTAACAGTGGACAAGCAAGAACAGAAAATAATGGACATGGAGGAAATAATGAAACTTTGTATCCAAACTGAAGAGAACTATCCAGGATTTAGGAAGTTTGGTTTCTTTCAGCTTGTGGATGCTACAGATGGTTTTTCAGAGAACAGAAATGTCGGAATTGGTGGATTCGGTACTGTTTACAAGGTGATGAATGTATATACTCCTTGTCTACCCAAAATATGATTTGTTATAATATAATGCTACATGAATTCTATTGCAGGGCCAGCTACTTGATGGACATACAGTTGCTATCAAAAGATTTGTTGTGGATGCAGCAATATTTGATTTCAAAAGTGAATTGCAGCTTGTAAGGCTTCAGCATACCAACCTAATTAGGTTATTGGGATGGTGCATTCATGAAAAAGAAAAGATTCTTGTGTATGAGTTCATGCAGAAAGGCAGTTTAGACAATATTATCTTCCGTAAGTTTTAAACAGTCTCTTTTTAATACGTTTTGCGAGACGGGCTTAATCCAATTCCTAATAAATGTGCACATAATAAAGCAGTTCTTATGCTTCTGATAACAACACATTTGAAACACCTTTCATACACATGCACACACATAAAAGTCTGATTCCAAAACTATGTTGATTTGATAAAGAACAGTATGTAAGCAATTACTATGTTCTCTAAAGTACATTTCTTTTGCAATCATTCTACAGATAAAAGGAAGGGCGCATTGCTAAATTGGTCTAAGCGACTTCAGATAATTAAAGGGCTAGCTGAGGGGCTTCTTTACCTGCACAAGCACTGTTTGATTGTACATAGGGATTTGAAACCAAATAATATCCTCTTAGACCATGACATGAACCCAAAGATTGCTGATTTTGGATCTGCGGTAACACTGGTTTCAGATGTAGCAGAAGAGCGTACAAGGAGAGTCATGGGAACCAGGTATGAGCTGAACAAAATATATAGAATGATGCAGTGCAACATATATGTTCCAGTTTTCTCATGCCTCCCTCTGTTATCCATTTCCAGTGGTTACATAGCTCCTGAGTATGCATCGGAAGGCCGTTATTCGCTTAAGACAGACGTGTTTAGCTTTGGCGTCGTGGTTCTAGAAATCATTAGTGGACGAAAGAATTTCATAATGGAGAAACAAGGGGATACCGTTGGCAATCTCATTCGAGACGTGAGTAATTGTTTTAATGGTCTTCTTCTAGCAAATAGTATTTGTGTTGGGCACCTGACTAACTGTAACATATTTCAGGCATGGCATATGTGGAGAGATGGAAGGTTGCATGAGCTTGTAGACCCAGCATTGTGTGATGAATATGAAAGCCCTGTGATAATGCGATGCACTCAGGTGGCGCTTCTTTGTGCTCAAGAAGATCCAGCAGATCGGCCCACAATGACAGATGTTACTAGAGTTCTGAACTCTGAAAGCATACTATTATCAGATCCAAAGGAGCCAACTGAGCTAACTGATGGAGGTGCTAGTATTGACAGGCCATCGACATATATTGGCCAGTCGAGCAAGACGATAGACATAACCATCACAAGTTCAGCTCCGGTGTCCACCAGAGTTCGCATCATTGTTGACCCAGAAATTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023515

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA023515&oldid=46040"