BGIOSGA023612

From RiceWiki
Revision as of 13:35, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023612| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023612, complete gene.| tag = OsI_244...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA023612

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023612, complete gene.

LocusTag

OsI_24480

Ensembl Transcript ID

BGIOSGA023612-TA

Ensembl Protein ID

BGIOSGA023612-PA

Length

3545

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:32205054..32208598

Sequence Coding Region

32205054..32205106,32206930..32207020,32207150..32207305,32207395..32207469,32207537..32207938
,32208288..32208365,32208461..32208598

Genome Context

<gbrowseImage1> name=IndicaChromosome06:32205054..32208598 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:32205054..32208598 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGATGGTTCTCTGCATCTACGCATTCCCCACCAACATGCCGCCCTTCAGTCTTCAACTCTATGCTCCGACGACGCTGGCGCCGGCTCACGACTTCTGGCTGCTGCGGTACACCTCCATTCTCGGTGATGGAAGCTTAGTGGTGTGTGAGAGATCACTCAGTAGCAAGCAAGGAGGCCCAAGCATGCCACTTGTCCAGCCTTTTATCAGAGATGAGATGCTTCCCAGTGGGTTCTTGATCCGACCTAGCGATGGTGGAGGCAGCGTGATACACATCGTTGATCATATGGACCTGGAGCCTTGGAGCGTGCCTGAAGTTGTGCGACCTCTGTATGAATCTTCTGCCTTGGTTGCGCAGAAGATATCGATGGCGTCATGCAAAATTCAGTCTTTACGCTGCCTGAGGCAGGTTGCCTACAAAGATACCCGTTCTGTGATCACAGGATGGGGAAGGAAGCTTGCGGCTTTGCATGCTCTGAGCCAAAAAGCTCACCACGTAGGACTCCTGAACAGCAGATGCTTCTTGGTTCTTGCCATGAATCTTCAGTTCAAAAGTGTGAAAAATAATTTTGCATGCTCTCTTTTCAGAGGCTTCAATGAAGTTCTCAATGGGCTTGCGGATGATGGATGGTCCGTGATCGAGAGCGATGGCATCGACGATGTTTGCATCTCTGTCAATTCATCCAAAGTGACCGGTTGCAATGCAACATTCAGCAGTGGACTCACTATTGTCAGTACCGGTGTTCTTTGTGCCAAGGCATCCATGCTGTTGCAGTTCCTGGAAGTTATCAAGCTAGGAAACACCAGAAACTACCAAGATACACTGGTGCACCGTGATCTGTTCCTCTTGCAGATGTACAATGGAGTAGAGGAGAGCAGTGCAGGAACATGTTCAGAGCTAATCTTTGCACCCATCGATGCATCGTTCAGTGATGATTCTCCGCTGCTGCCTTCCGGTTTCTACATCATCCCTATCGATTCTCCTCTGTAA</cdnaseq>

Protein Sequence

<aaseq>MEMVLCIYAFPTNMPPFSLQLYAPTTLAPAHDFWLLRYTSILGDGSLVVCERSLSSKQGGPSMPLVQPFIRDEMLPSGFLIRPSDGGGSVIHIVDHMDLEPWSVPEVVRPLYESSALVAQKISMASCKIQSLRCLRQVAYKDTRSVITGWGRKLAALHALSQKAHHVGLLNSRCFLVLAMNLQFKSVKNNFACSLFRGFNEVLNGLADDGWSVIESDGIDDVCISVNSSKVTGCNATFSSGLTIVSTGVLCAKASMLLQFLEVIKLGNTRNYQDTLVHRDLFLLQMYNGVEESSAGTCSELIFAPIDASFSDDSPLLPSGFYIIPIDSPL</aaseq>

Gene Sequence

<dnaseqindica>1..53#1877..1967#2097..2252#2342..2416#2484..2885#3235..3312#3408..3545#ATGGAGATGGTTCTCTGCATCTACGCATTCCCCACCAACATGCCGCCCTTCAGGTACAAATCAAGTCTGATAAAACACTGCCATCCTTCTTGTGTTACATGTTCTGTGTTACATGGTGGCCTCCTCCTCCACCACAGCGGCGGTGTCGGCAAACAGATTTGAGAGGTAAAAACATCCCTTCTTGTGTTGCTTTACGGCCATATTTGAGAGGAGAATGGCATGATGCTGCAGTTTGATTTCACCGGCTTTCCTGCTTGCCGTATTTGTAATCTCAACTTTCATTTCAAGTGATTGTTGGGGCCAAACCTATGGTGGCTAGTCGCTGAGGTGGTGTCATTAATGGAGGCAAAGAGTGGCAAGTGGTGACCAAAGCGGAAGGACCTGGTGTGTTGCGCGTGCGCCGGCCACTGGCGGTGCGAGGCCACGGCGACGGTCATGCTGCCATTGTCCAACTATGGCTGCTGACCAATTTCTTCCCTGAAGTAGGTGAGGTTAGCCCGATAGGAACACATACCACCTATATTGTGATATTTGGAGCTAGGGCACATTCAGTCCTGTTATTTGATCTGTAGCATCAAGGTTGTAAAATTATCAGTTTTGCAGAGGATTTTTGGTCATCAAATTGGAGTTGATGATATTTTTTGAGACACAGAATTAACTAATATCAAATATATAATCTGGATTTCCCTTCAACTCAAAGCTTGTTGTTGTCTTGTTGTCTGCGTGCATGCTGGGGTGGCTCTTCTGCGGGCGATCAAAAGGGCAGTGACAGCATGTATTGACGAACGCAATGTGCTTGCTGGCCGAATAGACATGAACACATATCACTGAGAGGGAGTGAAACAGTGTTGACGAGTAGCCTGCTTTTGGGTTAGTTCTTGATCAAGCTAAAATGCACTTCTTTTTCTTGATCGGTATAAAGGGCACCCTTTTTTTTTCTTGCAGCATTTTCATATGCACCCAATATTGCCCACACGGCCACACCACCATCATCTATAGGCAAGTAGTATGTTCATGTGCAAATTTTGCAGGGATCAAATAAATGTCATTTCCCTGATCCATTATTTGGCTATCTCGTGTACTTGATGCCGATTTTTAATTTCTTATTGCTGCATGAACTATTTCTTTTGGACGGTCAGAGTCTCAATCCTTGCCATCATTAACCGAGAATCTTTTTTCCATGATTCTTACTGTTTCAGGTGATAGAAATAGCATTGTAGTAGGGTGGTAATAGCAAGAAGCCGAAAGGTAAGGATCAGGCTATAACGTTGGGGCATTGGCAACTCAATTAAAAGGTAAGTATCTATTGGTCACAGAGCTTGACAACTTTGAATCTTTGATGATCGTATTGTACCATTGTTTCAGTTGTAGTGGCCATTGTTCCTGTTAAATGCAAGTTGATACTAATAAACCCATTGAATAGAGGCCTTCATATAATTCAATGTTTAAGAGAAACCAACCGTGGACTGGAGCTCTCAGATTAGTTTATTCAAGCCACTTTTTTCTAGCATGCAATTATTTCGTGGCTTATTGCATTCCCTATAATTTTCATTGACTTAGAGGAGGTTTGGGGCTTTTTATTTTTAATGAGGTGCAACAATCTGTCCATCTCACTCGTTGGTGCAATTACATTTTTTGCTTGATTTTCTTCACTGCTTTATGACGACTGAGATAAAAACTTATCTGTGCAGCTTCATGTTTCTGATGCAGGGGTAGGGTAGTTGTCTGGTTGTTCATGTTCTGATTTAACTCATTAGTGTTGTGCTAAATGGAAGGTCAAGCTGCTCTACATGCAGGCAAGAACAGACAAGCCTGAAAATTTTTGTGGCAAATTCTTAGCTCAACCTGAAATTCCGAAGCTGAAATCTGTATTCAGTCTTCAACTCTATGCTCCGACGACGCTGGCGCCGGCTCACGACTTCTGGCTGCTGCGGTACACCTCCATTCTCGGTGATGGAAGCTTAGTGGTTAGTTGTCTGATCATGGAGCGCAAAACAAATTATCCATGTGCTGATGTGCAATTAATACCAAAGTATTTGTGTGTCACTATGATGTCTTGTCTGCTTGCCTGAATGTTCTTGTTCTGAATTCTGAAGGTGTGTGAGAGATCACTCAGTAGCAAGCAAGGAGGCCCAAGCATGCCACTTGTCCAGCCTTTTATCAGAGATGAGATGCTTCCCAGTGGGTTCTTGATCCGACCTAGCGATGGTGGAGGCAGCGTGATACACATCGTTGATCATATGGACCTGGAGGTAATAACTAATAACCATTACAATTTCTTATCCAAATAGTTCATTCATCTAGCAGAAAGAAATTTCAGCCAATTTTTTTGTGTTCACAGCCTTGGAGCGTGCCTGAAGTTGTGCGACCTCTGTATGAATCTTCTGCCTTGGTTGCGCAGAAGATATCGATGGCGGTACAGTAATTATAGTACCCTGTTCTTGATGTTCTTGTTGATTTGTAAAAATTATTGCCTAATTCAGTCATGCAAAATTCAGTCTTTACGCTGCCTGAGGCAGGTTGCCTACAAAGATACCCGTTCTGTGATCACAGGATGGGGAAGGAAGCTTGCGGCTTTGCATGCTCTGAGCCAAAAAGCTCACCACGTAGGACTCCTGAACAGCAGATGCTTCTTGGTTCTTGCCATGAATCTTCAGTTCAAAAGTGTGAAAAATAATTTTGCATGCTCTCTTTTCAGAGGCTTCAATGAAGTTCTCAATGGGCTTGCGGATGATGGATGGTCCGTGATCGAGAGCGATGGCATCGACGATGTTTGCATCTCTGTCAATTCATCCAAAGTGACCGGTTGCAATGCAACATTCAGCAGTGGACTCACTATTGTCAGTACCGGTGTTCTTTGTGCCAAGGCATCCATGCTGTTGCAGGTTAGCTTCACTATGAAACTAGAATTAGTACTTTCTTTTTGTTTGTTTTGTAATTGCCAATATTTTTCATACAATATTTCTTCTGCTGTTTGCTAGGATGTCTCTCCTCCATCACTACTGCAATTTTTGCGCGAACACCAGTCACAATGGGCTGACGATGAAACCAAACTTCTGCAATTTACCCATGTCTCGTCTTGGAGGATTCAGTGGTCAGGTCATACTTCCTTTAGCACACACTTTTGAACCTGCAGAGGTAAGTCCATCTTCTACTGTCTGTCGGTTACAAAAAAGGTCCTGTCCAATTCTGTTTTCCTGCTCGATGTTTTGGTGCAACCATCTACTGTTTCAGTTCCTGGAAGTTATCAAGCTAGGAAACACCAGAAACTACCAAGATACACTGGTGCACCGTGATCTGTTCCTCTTGCAGGTGACTTCTTGATTCATGAAACTTATCACCAGTTGAAGAATCATTTTCTTTTTTCCTCTGTAAAACTTGTGTTCTTGGCCTGATTGCAATGGCAGATGTACAATGGAGTAGAGGAGAGCAGTGCAGGAACATGTTCAGAGCTAATCTTTGCACCCATCGATGCATCGTTCAGTGATGATTCTCCGCTGCTGCCTTCCGGTTTCTACATCATCCCTATCGATTCTCCTCTGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023612