BGIOSGA023644

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Revision as of 13:35, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023644| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023644, complete gene.| tag = OsI_245...")
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Gene Name

BGIOSGA023644

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023644, complete gene.

LocusTag

OsI_24539

Ensembl Transcript ID

BGIOSGA023644-TA

Ensembl Protein ID

BGIOSGA023644-PA

Length

6196

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:32758383..32764578

Sequence Coding Region

32758383..32759003,32759102..32759310,32759401..32759550,32759649..32759707,32760251..32760360
,32760615..32760721,32760842..32760980,32761106..32761222,32761319..32761426
,32761622..32761693,32761931..32762053,32762185..32762350,32762446..32762567
,32762647..32762784,32762864..32763006,32763101..32763163,32763509..32763572
,32763640..32763775,32763881..32763954,32764043..32764137,32764232..32764263
,32764376..32764578

Genome Context

<gbrowseImage1> name=IndicaChromosome06:32758383..32764578 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:32758383..32764578 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGATCAAGGAGACCAAGACTGCCTGGGTTTGGTGAGGACTGTGAGCCTCGTGGTGGTGGGAGAGGAGGAGGAGGAGGAGGTGGCCGTGGCCGTGGCAGCTACTACCCACAGGCACAGCAATACCACCCACAAGGACATGGTGGCCGTGGAGGAGCAGGCTACTACCATGGTGCTGCTCCTCAACCTCGCGGCGCAATGGTGGTGCAGCAATGGCGTCCTGCTACTGCTGCTGCTGAGCATTTGGGCCATCAACAGCCCTACAACAGCAGTGTGAGACCACAGCACTATTATGGTCCGTCTGCCATAGCTCCCGAGCTGCTCCAAGCAATGGATGCTCCACATGAGCCTCCTGCCAATGTCTCCTCACCAGAAGCAGCCTCTCCGGAGGCATCATCACCACGGTCTCTTGCTCTTGAGGTCACAGAGCAGCTTCAGGACTTGTCTGTGCAGTACCAATTAAGTGAGAGCCAGGAAGAGATTGTCCAACATGTTCCTGTGTCCACCAAATCATTTAAATTTCCTCACCGCCCTGGAAGTGGGAGTATTGGAACCAGATGTTTAGTGAAGGCGAATCACTTCTTTGCTCAACTGCCAGACAAGGATCTTCATCAGTATGACGTTTCAATCACCCCGGAGCTTACATCACGAATTCGGAGCCGTGCTGTGATGGAAGAGTTGGTGAGACTGCACAAGATGTCATACTTGGGAGGACGTCTTCCAGCCTATGATGGTAGGAAGAGCCTTTACACGGCCGGTCCATTGCCGTTTACTTCAAAAGAATTTCGCATCTCTTTGCTTGAGGAAGATGATGGTTCTGGTTCAGAGAGGCGTCAGAAAACATATAACGTGGTGATTAAGTTTGCTGCAAGAGCTGATCTTCACCGTCTTGAGCAATTTCTAGCTGGAAGGCAGGCAGAGGCTCCCCAGGAGGCCTTGCAAGTTCTTGATATTGTCTTGCGAGAGTTGCCAACAGCAAGATATGCACCCTTTGGTCGATCCTTCTTCTCTCCTGACCTGGGGAGGAGACGATCCCTCGATATGTCGGCAACTGCTTTCTTTGAGCCGTTACCAGTCATAGATTTTGTCATACAGCTTTTAAATACTGACATCCGCTCGAGGCCCTTATCAGATGCTGAGCGTGTCAAGATCAAGAAGGCCTTAAGAGGAGTGAAGGTAGGAGTTACTCACCGTGGCAACATGCGCCGGAAGTATCGGATATCTGGTTTGACATCTCAGGCAACTCGGGAACTGACTTTTCCTGTTGATCAAGGAGGCACAGTGAAATCTGTTGTACAATATTTTCAAGAGACATATGGATTTGCGATCCAGCATACCTATCTTCCTTGTCTGCAAGTTGGCAATCAGCAGCGTCCAAATTACCTACCAATGGAGGTCTGCAAAATAGTGGAAGGACAGAGGTACTCCAAGAGACTGAACCAGAATCAGATAAGGGCTCTTTTAGAGGAGACATGTCAGCGCCCACACGATAGGGAGCGTGACATAATTCAGATGGTGAATCACAACTCCTACCATGAAGATCCTTATGCAAAGGAGTTTGGCATTAAGATCAGCGAGCGTCTGGCCTCGGTTGAGGCACGGATTTTACCTGCCCCTCGGCTCAAGTATAATGAGACTGGCAGAGAGAAGGATTGCTTGCCTAGAGTTGGTCAGTGGAATATGATGAACAAGAAAATGGTAAATGGTGGTAGAGTCAGGAGCTGGATATGTGTCAATTTTGCTCGAAATGTGCAAGAGAGTGTTGCTAGTGGATTTTGTCGTGAACTGGCCCGCATGTGCCAGGCCTCAGGAATGGACTTTGCTTTGGAGCCTGTTCTTCCATCTATGTATGCACGTCCTGATCAAGTGGAACGAGCTCTGAAAGCCAGGTTCCATGATGCAATGAACATACTTGGGCCACAGCACAAGGAGCTCGATTTACTTATCGGACTGCTTCCTGATAACAATGGTTCTCTTTATGGTGATTTGAAGCGTATATGCGAAATTGACCTTGGATTGGTTTCCCAGTGCTGTTGCACAAAGCAAGTGTTTAAAATGAACAAACAAATCCTAGCAAATCTTGCTCTGAAGATAAATGTGAAGGTTGGGGGAAGGAACACTGTACTGGTTGATGCAGTGTCGAGACGCATTCCGTTGGTAACTGACAGGCCTACTATTATATTCGGTGCTGATGTCACCCATCCTCACCCTGGCGAAGATAGCAGCCCATCCATTGCTGCTGTTGTGGCCTCCCAAGATTGGCCTGAAGTGACAAAGTATGCTGGTTTAGTTTCTGCTCAATCTCACAGACAAGAGTTAATAGATGATCTGTATAACATCACGCATGATCCTCATAGAGGGCCCATCTGCGGTGGAATGGTCAGGGAACTTCTTATATCCTTCAAAAGATCAACTGGTCAAAAGCCTCAACGGATAATATTCTATAGGGATGGTGTTAGTGAAGGGCAATTTTACCAGGTTCTATTGCATGAGCTTGATGCAATCCGAAAGGCTTGTGCATCACTCGAAGCAAATTACCAACCGCAGGTGACTTTCATTGTGGTTCAGAAGCGCCACCACACGAGATTATTTGCACACAACCACAATGATCAGAATTCAGTCGACAGGAGTGGGAACATATTGCCTGGTACTGTTGTTGACTCCAAGATTTGCCATCCTACGGAGTTTGACTTCTTCTTGTGCAGCCATGCTGGAATCAAGGGCACAAGCCGTCCCGCTCATTACCACGTCCTGTGGGATGAAAACAACTTCACAGCTGATGCGTTGCAGACCCTCACCAACAACCTCTGTTACACTTATGCGAGGTGCACACGATCCGTATCTATTGTTCCACCAGCATACTATGCTCATCTGGCGGCGTTCAGAGCCCGTTTCTACATGGAGCCAGATAGCTCGGACAGTGGTTCAATGGCGAGTGGTCGTGGAGGAGGTTCGTCTACATCGCGCAGCACTCGTGCTGCAGGTGGTGGAGCCGTCAGGCCCCTTCCTGCACTCAAGGACAGCGTCAAGAATGTCATGTTCTACTGTTAG</cdnaseq>

Protein Sequence

<aaseq>MGSRRPRLPGFGEDCEPRGGGRGGGGGGGRGRGSYYPQAQQYHPQGHGGRGGAGYYHGAAPQPRGAMVVQQWRPATAAAEHLGHQQPYNSSVRPQHYYGPSAIAPELLQAMDAPHEPPANVSSPEAASPEASSPRSLALEVTEQLQDLSVQYQLSESQEEIVQHVPVSTKSFKFPHRPGSGSIGTRCLVKANHFFAQLPDKDLHQYDVSITPELTSRIRSRAVMEELVRLHKMSYLGGRLPAYDGRKSLYTAGPLPFTSKEFRISLLEEDDGSGSERRQKTYNVVIKFAARADLHRLEQFLAGRQAEAPQEALQVLDIVLRELPTARYAPFGRSFFSPDLGRRRSLDMSATAFFEPLPVIDFVIQLLNTDIRSRPLSDAERVKIKKALRGVKVGVTHRGNMRRKYRISGLTSQATRELTFPVDQGGTVKSVVQYFQETYGFAIQHTYLPCLQVGNQQRPNYLPMEVCKIVEGQRYSKRLNQNQIRALLEETCQRPHDRERDIIQMVNHNSYHEDPYAKEFGIKISERLASVEARILPAPRLKYNETGREKDCLPRVGQWNMMNKKMVNGGRVRSWICVNFARNVQESVASGFCRELARMCQASGMDFALEPVLPSMYARPDQVERALKARFHDAMNILGPQHKELDLLIGLLPDNNGSLYGDLKRICEIDLGLVSQCCCTKQVFKMNKQILANLALKINVKVGGRNTVLVDAVSRRIPLVTDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVSAQSHRQELIDDLYNITHDPHRGPICGGMVRELLISFKRSTGQKPQRIIFYRDGVSEGQFYQVLLHELDAIRKACASLEANYQPQVTFIVVQKRHHTRLFAHNHNDQNSVDRSGNILPGTVVDSKICHPTEFDFFLCSHAGIKGTSRPAHYHVLWDENNFTADALQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDSSDSGSMASGRGGGSSTSRSTRAAGGGAVRPLPALKDSVKNVMFYC</aaseq>

Gene Sequence

<dnaseqindica>1..621#720..928#1019..1168#1267..1325#1869..1978#2233..2339#2460..2598#2724..2840#2937..3044#3240..3311#3549..3671#3803..3968#4064..4185#4265..4402#4482..4624#4719..4781#5127..5190#5258..5393#5499..5572#5661..5755#5850..5881#5994..6196#ATGGGATCAAGGAGACCAAGACTGCCTGGGTTTGGTGAGGACTGTGAGCCTCGTGGTGGTGGGAGAGGAGGAGGAGGAGGAGGTGGCCGTGGCCGTGGCAGCTACTACCCACAGGCACAGCAATACCACCCACAAGGACATGGTGGCCGTGGAGGAGCAGGCTACTACCATGGTGCTGCTCCTCAACCTCGCGGCGCAATGGTGGTGCAGCAATGGCGTCCTGCTACTGCTGCTGCTGAGCATTTGGGCCATCAACAGCCCTACAACAGCAGTGTGAGACCACAGCACTATTATGGTCCGTCTGCCATAGCTCCCGAGCTGCTCCAAGCAATGGATGCTCCACATGAGCCTCCTGCCAATGTCTCCTCACCAGAAGCAGCCTCTCCGGAGGCATCATCACCACGGTCTCTTGCTCTTGAGGTCACAGAGCAGCTTCAGGACTTGTCTGTGCAGTACCAATTAAGTGAGAGCCAGGAAGAGATTGTCCAACATGTTCCTGTGTCCACCAAATCATTTAAATTTCCTCACCGCCCTGGAAGTGGGAGTATTGGAACCAGATGTTTAGTGAAGGCGAATCACTTCTTTGCTCAACTGCCAGACAAGGATCTTCATCAGTATGACGTGCGTTTGTTTTTCCATGCCACATTCCTCCTTGCTCCTCCTACATGTTTTTCAATCTCTCAGTTTTTATTTGCCACCTTGTGGTTCATCTTTGACAGGTTTCAATCACCCCGGAGCTTACATCACGAATTCGGAGCCGTGCTGTGATGGAAGAGTTGGTGAGACTGCACAAGATGTCATACTTGGGAGGACGTCTTCCAGCCTATGATGGTAGGAAGAGCCTTTACACGGCCGGTCCATTGCCGTTTACTTCAAAAGAATTTCGCATCTCTTTGCTTGAGGAAGATGATGGTTCTGGTTCAGAGAGGTGTGCCCCTATTCCTTTTTTGATCACCATGATATTCTAGTACCAGGGCAAATCATCTTGTATATTCTGACTCTTCTTTCTATGATCTAGGCGTCAGAAAACATATAACGTGGTGATTAAGTTTGCTGCAAGAGCTGATCTTCACCGTCTTGAGCAATTTCTAGCTGGAAGGCAGGCAGAGGCTCCCCAGGAGGCCTTGCAAGTTCTTGATATTGTCTTGCGAGAGTTGCCAACAGCAAGGTAGATTTCTTTGAAACATTACGTAGAATGTATATTCAGATAATAGGAGAATCAATCCAAACTATTGAGTCATCCTTCCAATCCCATTTTTCTTACAGATATGCACCCTTTGGTCGATCCTTCTTCTCTCCTGACCTGGGGAGGAGACGATCCCTCGGTGAGGGACTAGAAACCTGGCGTGGGTTTTATCAGAGCATTCGTCCTACTCAAATGGGCTTGTCACTGAATATTGGTAAAACTCTCTCTGTTTCTGTCGCATGATCTTTCTCATGAATCATGAATATGGGTATGATCTTGTGCATATGTGCATTTATGTTTGTATGTAATAATACATTGAAGACCCCAGTCAAAAAAAAAAAAACATTGAAGACTCATGGAACCAGCAATAAAGTAGCCTGGTTTTCATAAATCCTTTGCCTTAAAACATCAGGCTGAGGCCAACTGGTCTGTCCAATTTTTTTTATCCTATCACCAATGCCATGTTTGCTGCACATTTCTGAATTTGAAAAACTTAGCTTTGATTTTTTTTCCCCAGGCTTATGATCATGTCATGAAGGATCTCATGTACATAAAATTTACATGTTAACTCATAAATATCAATCTTGAACTTTAAACAGAGATGCCTTTGTATATTAGTACTCTTACTTTTTGAACATTTTGCCCTCAATTTATATCTTCTTTTCTTTTCCTGCCTTTTCAGATATGTCGGCAACTGCTTTCTTTGAGCCGTTACCAGTCATAGATTTTGTCATACAGCTTTTAAATACTGACATCCGCTCGAGGCCCTTATCAGATGCTGAGCGTGTCAAGGTATGCTGGTGATCCTGTTTTACTCATCTTTACCTTTTATTTCATTGGAAGAGCTATTCCTCAAATGAACTCAGTATATTTGTTGTAATACAGAAGATATACAGATAATTATTGCATCTGTTCCCAATGATTAATCTTTAGTTTCAACGGCTTTGTTTTGTCTTATGTTTTTTAATCATATGTCTAGCTTATTTGTATATCATTTTTGTCAACTAATTAAATAACGAATTTTATGTTATTATGCAACACCCTAGATCAAGAAGGCCTTAAGAGGAGTGAAGGTAGGAGTTACTCACCGTGGCAACATGCGCCGGAAGTATCGGATATCTGGTTTGACATCTCAGGCAACTCGGGAACTGACGTATTGATCTCTCTCTCTTTTTGTTCATAACAAATGCTATTTGCCTTTTAAGTCACTAGTAGATGGCAATCCTATGCCACTATTATTGTCTTCCTGAAATTAATGTTAATTTTGCCACAGTTTTCCTGTTGATCAAGGAGGCACAGTGAAATCTGTTGTACAATATTTTCAAGAGACATATGGATTTGCGATCCAGCATACCTATCTTCCTTGTCTGCAAGTTGGCAATCAGCAGCGTCCAAATTACCTACCAATGGAGGTTAGCTAGCAAAGCTCTATGATATTGTTCTGTTTCCTTGTTTAACTTGTCCTGCCAAAATTTTCAATTCTATTTTTTTTTGGGAGGGGGGGGGGGGTGCATACTTAACTTTTATGCTTATTCAGGTCTGCAAAATAGTGGAAGGACAGAGGTACTCCAAGAGACTGAACCAGAATCAGATAAGGGCTCTTTTAGAGGAGACATGTCAGCGCCCACACGATAGGGAGCGTGACATAATTCAGGTATGTCACACCTTGCATAGAATTATGACGCTCTACCATTGTACGTGTAAGTTCACATGCTTACATAAAAAAACATTTTCTTTTGTGTGTATGCAGATGGTGAATCACAACTCCTACCATGAAGATCCTTATGCAAAGGAGTTTGGCATTAAGATCAGCGAGCGTCTGGCCTCGGTTGAGGCACGGATTTTACCTGCCCCTCGGGTAGGTGGAAACCAATTCATGTAGAAACAATGGTTTTTCAAGTTCATTTTTATCATGTTGTCACCCTTTTCTGGATGGATGAAGCATAGCTTCAATGGTCAAATGAGAAGGCACATAAAAAAATTGGATGATTAACATCGCTTCAAACTCCTTTTAACATTTTTAACCTCGCAATCCTCCTATTTGTTCATGCAGCTCAAGTATAATGAGACTGGCAGAGAGAAGGATTGCTTGCCTAGAGTTGGTCAGTGGAATATGATGAACAAGGTAGTGATAATACTTAATGCATAAGTAGTGGCTAGTTTTTACAAATCATTATGTTCAGTTTTTTTTTACAGCTTTTGAACTTTGTCTGCATTGCACATACTTTATGACACTCATATGGCAATGTTGATTGTGCTTACTCTAGTCCTAGCTATTATATTTTGTTTCTTAAGTTTGGTTAATCAAATAGGTGTTCCTGTTTTATCTCAAACCTTATCATTTTCATTTCTCGCTATCCAGAAAATGGTAAATGGTGGTAGAGTCAGGAGCTGGATATGTGTCAATTTTGCTCGAAATGTGCAAGAGAGTGTTGCTAGTGGATTTTGTCGTGAACTGGCCCGCATGTGCCAGGCCTCAGGAATGGCAAGTATCCCTTAATGCTTCCAGATGCATTTGCCCATTGACATACAGAAGCATCTATATAGTGCATTCAATTTTACATCATTTAGACATTTACTTGTGTACAGTAGTAACTGTTTTACAAGCAATTGTAGGACTTTGCTTTGGAGCCTGTTCTTCCATCTATGTATGCACGTCCTGATCAAGTGGAACGAGCTCTGAAAGCCAGGTTCCATGATGCAATGAACATACTTGGGCCACAGCACAAGGAGCTCGATTTACTTATCGGACTGCTTCCTGATAACAATGGTTCTCTTTATGGTATATAAATTTGCAACTCTGAATGGTTAACTTGTATTGATTTATGTCCTATTGTGCTCAAAATTCAAGTCAAATGCTGACTCTGTTGGTATCAGGTGATTTGAAGCGTATATGCGAAATTGACCTTGGATTGGTTTCCCAGTGCTGTTGCACAAAGCAAGTGTTTAAAATGAACAAACAAATCCTAGCAAATCTTGCTCTGAAGATAAATGTGAAGGTTGGTGTTCTAGTGATATCTCTACTCATCTTTGTATGGATTCCTTCAGGTTTTGTGTAACATAAATTTTATCTTATAGGTTGGGGGAAGGAACACTGTACTGGTTGATGCAGTGTCGAGACGCATTCCGTTGGTAACTGACAGGCCTACTATTATATTCGGTGCTGATGTCACCCATCCTCACCCTGGCGAAGATAGCAGCCCATCCATTGCTGCTGTAAGTTGAACAAGCTAATGCTTTATATTTAGTGACCATTCTTGTCAAAATCTGCGAACAAATGTATGTTGCCCTGCAGGTTGTGGCCTCCCAAGATTGGCCTGAAGTGACAAAGTATGCTGGTTTAGTTTCTGCTCAATCTCACAGACAAGAGTTAATAGATGATCTGTATAACATCACGCATGATCCTCATAGAGGGCCCATCTGCGGTGGAATGGTCAGGTATATGCCCATGCCACACTCAACATCTCTCCTCTCTGTGTCCTTCTATTTCTTTTTAGCACAAAGTATTAATTGGTGATGTCCACATTTTCAGGGAACTTCTTATATCCTTCAAAAGATCAACTGGTCAAAAGCCTCAACGGATAATATTCTATAGGTATGTTCTTGCATAAATTACCACTCAAGCTTGTCTGAGCCAAGCTGATTCTTCAAATACTTAGCGGTTTCAGGCTGACTACTGGAAATCCTTGGCGGTAGTAGGTTGTTGAATCTCAGCAGTCTTTGATGCTTGACTGAGCCAATATGATTCTTGACATTTTATTATTTGAGGCTCACTGGAGCCATGAAATCAAAACAAGTTAATTTCCCTATGCAGAAAACTTGAGCTGAAGGCCATGTTTGTTTTCTGGTTGATTTTTATCATGGAGTTTAGGGTTGAGTTTGATTAGAAAAGCCGCATCAGTACACTTAAGTATAAAGCTGAAGTTTTGCCTTTTCACAGGGATGGTGTTAGTGAAGGGCAATTTTACCAGGTTCTATTGCATGAGCTTGATGCAATCCGAAAGGTAAAACTTTCCCCTATTTTTCAGACTTTATGACTTCTCTTAATCTTTGTGTCTTGCTCCCTCTCAGGCTTGTGCATCACTCGAAGCAAATTACCAACCGCAGGTGACTTTCATTGTGGTTCAGAAGCGCCACCACACGAGATTATTTGCACACAACCACAATGATCAGAATTCAGTCGACAGGAGTGGGAACATATTGCCTGGTGAGTATTGATTCTTCTGTCGTTATTATGCAGGTTGGCTATAGCTTCGGGTTTGCTAGTTGCGCTGTTTATGGAGTTGTCGTTGATTCTTCATTTGCATTGCAGGTACTGTTGTTGACTCCAAGATTTGCCATCCTACGGAGTTTGACTTCTTCTTGTGCAGCCATGCTGGAATCAAGGTAAACAACAATGAGAGACATTCTACCATCTATCATCATAATATACACAAGTTGAGAATTGAAATGATGAACTCCCATCTCTCCGTAGGGCACAAGCCGTCCCGCTCATTACCACGTCCTGTGGGATGAAAACAACTTCACAGCTGATGCGTTGCAGACCCTCACCAACAACCTCTGTTACACGTAAGTTTTTCTTTACCCCATGATCAGTTGTTCTCAGGGGCTTGAACGAGGAACAGTCTCTCTCTCTCTTAACTTGCAATCACTTGTTGTGCAGTTATGCGAGGTGCACACGATCCGTATCTATTGGTAAGTGACAGTTGCTGCGAAATCTTTTCCATGCATAATTAATTAATAAATAAATATGTTGGGAGTAAGAGATTTGTGGTGGCTGAATTAACAACCAATTTTGCTGTTGCAGTTCCACCAGCATACTATGCTCATCTGGCGGCGTTCAGAGCCCGTTTCTACATGGAGCCAGATAGCTCGGACAGTGGTTCAATGGCGAGTGGTCGTGGAGGAGGTTCGTCTACATCGCGCAGCACTCGTGCTGCAGGTGGTGGAGCCGTCAGGCCCCTTCCTGCACTCAAGGACAGCGTCAAGAATGTCATGTTCTACTGTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023644