BGIOSGA023649

From RiceWiki
Revision as of 13:35, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023649| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023649, complete gene.| tag = OsI_245...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA023649

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023649, complete gene.

LocusTag

OsI_24546

Ensembl Transcript ID

BGIOSGA023649-TA

Ensembl Protein ID

BGIOSGA023649-PA

Length

2343

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:32833320..32835662

Sequence Coding Region

32833320..32833322,32833455..32833544,32833655..32833887,32834104..32834182,32834298..32834442
,32834793..32834855,32835321..32835352,32835453..32835494,32835618..32835662

Genome Context

<gbrowseImage1> name=IndicaChromosome06:32833320..32835662 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:32833320..32835662 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGATTGTTTTTTCTGAAGCCTGGTGGATTGGAACAAAAGAAGAAGAAAACCCACAAGAACTGAAACTGGATTTTCCAAAAGAGTTCCAGAATGATGAGGCGGTTGCAGATTCTGATTTTAAAGGTGGAGCAGGTGCTTCCTGTGATGAAGCTGTTTCCATCAATAAACCGCCAAAGGAAACCACCACAGGATCCCTTTCCCCTAAGATTGAATCTGACATTGATTCTTCCGAGGATTCAGACCTTAAGGACGAGGATAACACACAAAGCACTAGTCAAGCACCTTCAGTTAGGCAGTCTGCTAGAACTGCTGGGAAAGCCTTGAAGTATACTGAGATATCATCTGGAGACGATTCATCTGATAATGACGATGAGATTGATGTCCCTGAGGACATGGATGAGAAGATGAAGAGTCCAGCAGTTAAGAATGAATCCCAAAGTGAAGACATTAAACCTGCAGATTCGTCTGCGCAGCCTATCTCAGCTAAGAAGGAGCCACTCGTTCAGGCCACTCTGTCTAGCATGTTTAAAAAAGCAGAAGAAAAAAAAGGACCTGCTGCTAAGAAGCAGCGAGCAAGTCCAGAGGAAAAACATCCAACAGGGAAGAAGAGTGCTGGCAGAAGTCAGAAAAGGAGAAAAACACAGGTAGAAGATGACGAAATTGAAGTGCTCTCAAGTTCCTCCCAGGATAACAACGTGGACGATGATAGCGATGAGGACTGGGCTGAGTGA</cdnaseq>

Protein Sequence

<aaseq>MIVFSEAWWIGTKEEENPQELKLDFPKEFQNDEAVADSDFKGGAGASCDEAVSINKPPKETTTGSLSPKIESDIDSSEDSDLKDEDNTQSTSQAPSVRQSARTAGKALKYTEISSGDDSSDNDDEIDVPEDMDEKMKSPAVKNESQSEDIKPADSSAQPISAKKEPLVQATLSSMFKKAEEKKGPAAKKQRASPEEKHPTGKKSAGRSQKRRKTQVEDDEIEVLSSSSQDNNVDDDSDEDWAE</aaseq>

Gene Sequence

<dnaseqindica>1..3#136..225#336..568#785..863#979..1123#1474..1536#2002..2033#2134..2175#2299..2343#ATGGTGAAGAAGAAGCCCTGCCCTCTATCTATCTTGGAACTGGAACTTGCATCCGCACAATTGCTGCTATGCTCGTCCCTTTTCTCTGGGCTGTTATTGCTAACTACTTACTTATGCTGCTGTTTTATTTGGCAGATTGTTTTTTCTGAAGCCTGGTGGATTGGAACAAAAGAAGAAGAAAACCCACAAGAACTGAAACTGGATTTTCCAAAAGAGTTCCAGAATGTGCGTGTGCTTTCCATCCATATATGTTACTTCCTTTTTCTTAATTTTCGCTTCTTCTACGACGCTACTGTGCCTCTCATCTCATGTGCTTCTTCATTTCAGACTGGTAGGATGAGGCGGTTGCAGATTCTGATTTTAAAGGTGGAGCAGGTGCTTCCTGTGATGAAGCTGTTTCCATCAATAAACCGCCAAAGGAAACCACCACAGGATCCCTTTCCCCTAAGATTGAATCTGACATTGATTCTTCCGAGGATTCAGACCTTAAGGACGAGGATAACACACAAAGCACTAGTCAAGCACCTTCAGTTAGGCAGTCTGCTAGAACTGCTGGGAAAGCCTTGAAGTAAGTCAGTTTCACCCTTTTCTGTTGCTCTCTCGGATAAACAGAAAAGCACACGGGCTCTAGTTGTTGCTTAGCAGCTGAAAGATTGCCTACTTCCTGCATTTATTTGGCTTAACGGCTAATGTTTCTAAAAACAAATATGTTCATCTCCCACCCACCCGAAAAAAGGCAAAGAATAAAAAGGTATACTTGATAGATCCCTCGCTCTTTATGCAGGTATACTGAGATATCATCTGGAGACGATTCATCTGATAATGACGATGAGATTGATGTCCCTGAGGACATGGATGAGAAGGTAGTGATACCGAATTTAATTTTATAAGATTCAGATATATGAATCAATGTCAATCAAGCTTTTATCTTTTGTAAATAATTTTATTGTGTTTATTTGCTTTCTTCGTTTGAAGCAGATGAAGAGTCCAGCAGTTAAGAATGAATCCCAAAGTGAAGACATTAAACCTGCAGATTCGTCTGCGCAGCCTATCTCAGCTAAGAAGGAGCCACTCGTTCAGGCCACTCTGTCTAGCATGTTTAAAAAAGCAGAAGAAAAAAAAGGTGGAAATGCATACCTGTTATTATAATAGTTTCTCTCCTTATGATAGCGGACAGTTATACTCTTAACTTTGATATAATGTTTGCTTGATGCATTAATTGAACCAACTTCACAACATACCTCTTTTTCCGTATATGTGTTTTGAACATTATCTGTTTTCATGCCTGGTACAAATAAATTAGTTCAGCATCTGACAAAAGGATTTCTATTTCAGAGATGTACAAGAAGCCCGAAAGGATCTCCAGCAGCAAAAGGTTCTTCATATTTACGCAATTCTAGGCTTCTTGTGTTTTCCTTTATTACACAAAGAAAATTCCTTTTGATTGGATCTGTGATTGGCATTGTTCTACAGGACCTGCTGCTAAGAAGCAGCGAGCAAGTCCAGAGGAAAAACATCCAACAGGGAAGAAGAGTGGTAAGTGCAGTAGCAAGTCTGTTGTTAAGAAGCATCTAATAGACCTTGGTGCGATTACATTTGTTTTAAGCCTCTGAAGGCCTTCCTCAATGGAGAAGACTTGTTCTAAAATAATCCAAAGGTTTTGGGAGGCTTACTTGAGAAGCTTTCAGCTTTTGTCTATGTAAGGGGCATTTAAAATGTTAATCCATTTCATGAAGCTTTAGGACCATCTCAAGCCTGTCGAATCGGAATAAATGATGGAATTAAAATCTATTGCGGCGGCTCTATACTAAATATGCTATTTGAATTTTACAAGACTTGATATTGCTGGGTAAAAGCTGTGATGCATGGGGGAAAAACAAATGCATTTTAGTGGCTCTTAGCGCAACATGCAACGATCTATCAGCTTTTCTTTAACTGAGTACATCAGTACATGTTAGTATTCTTCATATGAAGCTGACTATTGTATTTACATGGATGTAGCTGGCAGAAGTCAGAAAAGGAGAAAAACACAGGTACTTTACTTAGCAACAATGATCAGGGATTTTAATTTGAATGTCCCTTCCCATTGTTTACTTTGCTGATTGCCTTTGCCCTCTCATTTTTCTGTCACAGGTAGAAGATGACGAAATTGAAGTGCTCTCAAGTTCCTCCCAGGTGATTGTTTTTCTGATAGCTAGAGTGTAGTAGATTGGTACATTATGGCCATTGTTCTTATTCTTCTTCTTGTTGTTATGAGGTTGTGCCGTCCTCCCAGCTAATCCTAACAGCATATGACAGGATAACAACGTGGACGATGATAGCGATGAGGACTGGGCTGAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023649