BGIOSGA023918

From RiceWiki
Revision as of 06:04, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023918| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023918, complete gene.| tag = OSJNBB0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA023918

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023918, complete gene.

LocusTag

OSJNBB0018L13.2

Ensembl Transcript ID

BGIOSGA023918-TA

Ensembl Protein ID

BGIOSGA023918-PA

Length

1882

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:23091278..23093159

Sequence Coding Region

23093124..23093159,23092880..23093027,23092605..23092776,23091748..23091802,23091530..23091661
,23091278..23091436

Genome Context

<gbrowseImage1> name=IndicaChromosome07:23091278..23093159 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:23091278..23093159 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGACTCACACGCAGATCAGCAAGAAGCGCAAGTTCGTGGCGGATGGGGTGTTCTTCGCGGAGCTGAACGAGATGCTGACGCGCGAGCTCGCGGAGGACGGCTACTCCGGCGTCGAGGTCCGCGTCACCCCCATGCGCACCGAGATCATCATCCGCGCCACCCGCACCCAGAACGTCCTCGGCGAGAAGGGGAGGAGGATCCGCGAGCTGACGTCCGTGGTGCAGAAGCGGTTCAACTTCCCGGAGAATGGCGTCGAGCTCTACGCCGAGAAGGTGAACAACCGCGGCCTCTGCGCCATCGCCCAGGCCGAGTCGCTCCGCTACAAGCTCCTCGGTGGCCTCGCCGTCAGAAGGGCGTGCTATGGTGTGCTCAGGTTTGTTATGGAGAGTGGTGCTAAGGGCTGTGAGGTTATTGTGAGTGGGAAGCTTAGGGCTCAGCGTGCTAAATCCATGAAGTTCAAGGACGGATACATGATTTCTTCTGGTTATCCTGTTAACTTGTATATTGACTCTGCTGTTAGACATGTTCTTCTGAGACAGGGTGTGCTGGGTATTAAGGTCAAGATTATGCTTGATTGGGATCCGAAGGGCAAGCAAGGACCAATGACTCCTTTACCGGATCTTGTTACCATCCATGCCCCTAAGGATGAGGATGAGTTTTCAAAGCCTCTTACAGCTGAGATCCCAGTTGCTGCTTAA</cdnaseq>

Protein Sequence

<aaseq>MATHTQISKKRKFVADGVFFAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFNFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGYPVNLYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPMTPLPDLVTIHAPKDEDEFSKPLTAEIPVAA</aaseq>

Gene Sequence

<dnaseqindica>1..36#133..280#384..555#1358..1412#1499..1630#1724..1882#ATGGCGACTCACACGCAGATCAGCAAGAAGCGCAAGGTAAGGCTCCGATCGAGACCTATCCATTCCAGAGCAGTCTCGATCTCGTCACCCATGGATTTCGAGATTTGATGCGCCCTTTTTTTTGGCTCGCAGTTCGTGGCGGATGGGGTGTTCTTCGCGGAGCTGAACGAGATGCTGACGCGCGAGCTCGCGGAGGACGGCTACTCCGGCGTCGAGGTCCGCGTCACCCCCATGCGCACCGAGATCATCATCCGCGCCACCCGCACCCAGAACGTCCTCGGTGAGTTCGTGAGTTCGTGGCATTTCTGATCTGGGCAGCGAGGCGATTCCGTGCGATTTATCCCGGGTGCGCGATCTGATGCTTTGGATGAATGCGATTTCAGGCGAGAAGGGGAGGAGGATCCGCGAGCTGACGTCCGTGGTGCAGAAGCGGTTCAACTTCCCGGAGAATGGCGTCGAGCTCTACGCCGAGAAGGTGAACAACCGCGGCCTCTGCGCCATCGCCCAGGCCGAGTCGCTCCGCTACAAGCTCCTCGGTGGCCTCGCCGTCAGAAGGTTGTGCTCCATCCTGAAACTCGCGTTCCTTAGATATTGGTATAGCAGCATGTCATCTTCACAGCAACCGGCTGCTTGTTCGTGCCAGAATTGTGTTCGATGATGACTGAGATCAATTACCGCTCCTCTATTGCATTTTCATATGCTGTGGTTGAGACTGCTTCTCTTCCGCGGTTTGCTGCTTTAGAGGGATATATGATTGTTTATTGTAGCTGTTTTTTTTATGCTCGAGTGAAGGTTGTGTTTGCATTTGTTCTATGTCATCTATAAAGCAAATAGGTCACTATTGTACCAACTTTGTGTCGGAAGATGACTAGATTATTTGAGCTAACTAGGTACTCTACTGAGAAGTGTTGACAATTGGCTTCTAATGTGTGATCCTGTTGGGCACATTAGTTTAATTTTAGTCCCTTTTTACTTCAAATATAAAAATATACAATATTTCGCTCCTCTTCTGCAGGTAGCTTTAGAGGGCTATGATCATTTATTATACCTGTTGTTTTCTGTACGAGTAAAGGTTGTTTGCATTTCTTCTATGTCATCTATAAAGCAAATAGGTCACCATGTACCAACTTTGTGTCGGAAGATGACTAGATTACTTGAGCCAACTAGGTAGTCTCTGCTGAGAAGCTTTGTTAATTGGCTTCTAACGTGTGATCCTGTTGGCCACATTTAATTTTAATCTCTTTTACTTCCAATCTAAAATAGCTTGTACTGTTTAGGATGTTCTCTACAAGCATGCTTTGTTTCTCTTTATGTATTTTGATTTTTGTCTGACTAAATTTGTTGTTTCTTTTGCCAGGGCGTGCTATGGTGTGCTCAGGTTTGTTATGGAGAGTGGTGCTAAGGGCTGTGAGGTACTCTCATGCAAAACGAAAGCTGTATGGTTTTGCTTGGATTCCTGCTCTATTTATGTATTGATTTGCTGTTCTTTGGTTTACAGGTTATTGTGAGTGGGAAGCTTAGGGCTCAGCGTGCTAAATCCATGAAGTTCAAGGACGGATACATGATTTCTTCTGGTTATCCTGTTAACTTGTATATTGACTCTGCTGTTAGACATGTTCTTCTGAGACAGGTTTGTACATAAAATCCATCCGTTTGAATAAAATGTTGTTGTCTCCTTGTGATAGCTTGAATTTTTTTCTTAGAAGCTGCTTCTTGTTTTCAGGGTGTGCTGGGTATTAAGGTCAAGATTATGCTTGATTGGGATCCGAAGGGCAAGCAAGGACCAATGACTCCTTTACCGGATCTTGTTACCATCCATGCCCCTAAGGATGAGGATGAGTTTTCAAAGCCTCTTACAGCTGAGATCCCAGTTGCTGCTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023918