BGIOSGA024308

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Revision as of 06:10, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA024308| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA024308, complete gene.| tag = P0434A0...")
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Gene Name

BGIOSGA024308

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA024308, complete gene.

LocusTag

P0434A03.138

Ensembl Transcript ID

BGIOSGA024308-TA

Ensembl Protein ID

BGIOSGA024308-PA

Length

2354

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:15903951..15906304

Sequence Coding Region

15906256..15906304,15905830..15906129,15905633..15905749,15905386..15905540,15905219..15905293
,15904854..15905126,15904425..15904760,15903951..15904121

Genome Context

<gbrowseImage1> name=IndicaChromosome07:15903951..15906304 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:15903951..15906304 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCAAGGAAAGATAGCCCCTATGCCTTTATTATTGTTCCATACACTTGTCTTCAGAAGCAGGCAGCAAGAACAGCTGCAACCATGAGTGGAGGTTCAGGCTTCCCGGGCTTCCACAACCACGGCTACGATCGCGACTACGCGCGACCGCTGTTCCGTGTATCGTCATTCTCCGACAATGGCGGTGGCAAGGGGCAGGAGCGCTATACGCCGTCGCCACCACAAGAGAGAAGCATGAGCCGCACGACATCCACGGTGGCGGTGGCACCACGCCTCTCGCCATCGGTGAGCAAGCTCAGCATGAAGAATCTGCAGCAAGTTGTGAATGAGAAGTCCCTAGAGGATGAAGAGATGGAGCTGATGAAGGAGAAGTACACCAAGCTGCTTCTTGGAGAGGACATGTCTGGGAGTGGGAAGGGTGTCTGCACGGCTGTGGCCATCTCCAATGCCATCACCAATCTATATGCAACTGTGTTTGGAACCTGCCACAGGTTGCAGCCACTGCCTCCTGAGAAGAAGGCGATGTGGAACAGGGAGATGGACTGCCTCCTCTCCATCTGCGAATACATTGTTGAATTCTCACCAAAAGTCCAGGCCATGCCAGATGGAAGCACTCATGATGTGATGGCAACCTCACCAAGATCAGACATACTAATGAACCTTCCAGCACTTGAAAAACTGGAAACTATGCTCCTGGAAATATTGGATAGCTTTGAGAAGACAGATTTCTGGTACATAGATCAGAGAAAGCAGTCCTTCAGTGACAGCATGAAGTTTCAGCGCAGCGAGGACAAGTGGTGGCTCCCTGAACCATGTGTCCCAGAGTCAGGCCTGTCTGATCGGATGCACCGCGAGCTGCAACAAAAGAGGGACCAAGCAAGCCAAATCCACAAGATGGCCATGGAGATCAACAGCAGTATCCTCTCTGAAATGCAGGTTCCACTGTCATACATAGAAACACTGCCAAAGAGTGGGAAGGTTGGCGTGGGTGATGCCATATACCGGTACATGTCTGCAGGGGATCAGTTCTCACCAGACCACCTCCTCAACTTCCTCAACTTGAGCTCAGAACATGAGGCACTTGAGATTGCAGACCGTGTTGAGGCTGCAATGTACGTATGGCGGAGAAAAGCAAGCATGACCCATGTGGTGTCAAAATGGGAAAATGTTACTGAGCTGAATGCTGATGGGGACAAGAATCTGATCCTTGCAAGTAGGGCTAGGAGTTTGTTGCTGTGCTTGAAGCAGAGGTTTCCAGGCTTGTCACAGACTACCCTGGACACAAGCAAGATTCAGTACAACAAGGACATTGGGCAGGCAATACTTGAAAGCTACTCGAGGGTGCTGGAAAGTTTAGCCTACAATATTGTCTCATGGATAGATGATGTTCTCATTGCAGATGGGAATGCCAGGAAAGGGCATAACATCAGAATGCAGAAGCAGGAGTTCAGCAAGCTTTCTCCTCAACAGTACTAA</cdnaseq>

Protein Sequence

<aaseq>MSRKDSPYAFIIVPYTCLQKQAARTAATMSGGSGFPGFHNHGYDRDYARPLFRVSSFSDNGGGKGQERYTPSPPQERSMSRTTSTVAVAPRLSPSVSKLSMKNLQQVVNEKSLEDEEMELMKEKYTKLLLGEDMSGSGKGVCTAVAISNAITNLYATVFGTCHRLQPLPPEKKAMWNREMDCLLSICEYIVEFSPKVQAMPDGSTHDVMATSPRSDILMNLPALEKLETMLLEILDSFEKTDFWYIDQRKQSFSDSMKFQRSEDKWWLPEPCVPESGLSDRMHRELQQKRDQASQIHKMAMEINSSILSEMQVPLSYIETLPKSGKVGVGDAIYRYMSAGDQFSPDHLLNFLNLSSEHEALEIADRVEAAMYVWRRKASMTHVVSKWENVTELNADGDKNLILASRARSLLLCLKQRFPGLSQTTLDTSKIQYNKDIGQAILESYSRVLESLAYNIVSWIDDVLIADGNARKGHNIRMQKQEFSKLSPQQY</aaseq>

Gene Sequence

<dnaseqindica>1..49#176..475#556..672#765..919#1012..1086#1179..1451#1545..1880#2184..2354#ATGTCAAGGAAAGATAGCCCCTATGCCTTTATTATTGTTCCATACACTTGTAAGTGACAGCCATGACATGATCACCAAAAAAGGGAAAGCAAGTCAATAACACCAGGTACCTATCCTCTCTGTTCTTGGCATGCCTCCATTCTTGTGCCATTCCCATTCATCATCTTTCTTGCAGGTCTTCAGAAGCAGGCAGCAAGAACAGCTGCAACCATGAGTGGAGGTTCAGGCTTCCCGGGCTTCCACAACCACGGCTACGATCGCGACTACGCGCGACCGCTGTTCCGTGTATCGTCATTCTCCGACAATGGCGGTGGCAAGGGGCAGGAGCGCTATACGCCGTCGCCACCACAAGAGAGAAGCATGAGCCGCACGACATCCACGGTGGCGGTGGCACCACGCCTCTCGCCATCGGTGAGCAAGCTCAGCATGAAGAATCTGCAGCAAGTTGTGAATGAGAAGTCCCTAGAGGATGAAGGTATCATATGCCAACCTATTTTGATTTCTGGTAGTGTGTCCTCTGGTGTTTCTGGTGGTTGATTGATGGGTGTTGTTCAGAGATGGAGCTGATGAAGGAGAAGTACACCAAGCTGCTTCTTGGAGAGGACATGTCTGGGAGTGGGAAGGGTGTCTGCACGGCTGTGGCCATCTCCAATGCCATCACCAATCTATATGGTAGTTCAGAGAATTGCAGATGAATCTTCTGTTAAGTTGGTCTTTGATGCAGGCAACAGTGGGTTGACCTCTGTGCTTGTTCTTGGCTGCAGCAACTGTGTTTGGAACCTGCCACAGGTTGCAGCCACTGCCTCCTGAGAAGAAGGCGATGTGGAACAGGGAGATGGACTGCCTCCTCTCCATCTGCGAATACATTGTTGAATTCTCACCAAAAGTCCAGGCCATGCCAGATGGAAGCACTCATGATGTAATTCCATTGCAAGAGTATCACGTCTCACACTCTGATAAGTTTCATCTTCATGGCATGTCTACTTAGGCACAAATTTCTGTTTTCTACAGGTGATGGCAACCTCACCAAGATCAGACATACTAATGAACCTTCCAGCACTTGAAAAACTGGAAACTATGCTCCTGGTAAAGTCCTGATTTGCGGAATTCCGGAAGGCTCCTTTCGAACAACTTTTGTAGTACAATGTATGACCAATAATTGCACACATTTTTTGCAGGAAATATTGGATAGCTTTGAGAAGACAGATTTCTGGTACATAGATCAGAGAAAGCAGTCCTTCAGTGACAGCATGAAGTTTCAGCGCAGCGAGGACAAGTGGTGGCTCCCTGAACCATGTGTCCCAGAGTCAGGCCTGTCTGATCGGATGCACCGCGAGCTGCAACAAAAGAGGGACCAAGCAAGCCAAATCCACAAGATGGCCATGGAGATCAACAGCAGTATCCTCTCTGAAATGCAGGTTCCACTGTCATACATAGAAACACTGCCAAAGGTACAGAGAAACTGCTTGATCTGAGTCTTTCTATGGTCCTGATTACTGAAAGTATCATTTCCCCCTGAGAAATGCATTTCTGCTACTCAACAGAGTGGGAAGGTTGGCGTGGGTGATGCCATATACCGGTACATGTCTGCAGGGGATCAGTTCTCACCAGACCACCTCCTCAACTTCCTCAACTTGAGCTCAGAACATGAGGCACTTGAGATTGCAGACCGTGTTGAGGCTGCAATGTACGTATGGCGGAGAAAAGCAAGCATGACCCATGTGGTGTCAAAATGGGAAAATGTTACTGAGCTGAATGCTGATGGGGACAAGAATCTGATCCTTGCAAGTAGGGCTAGGAGTTTGTTGCTGTGCTTGAAGCAGAGGTTTCCAGGCTTGTCACAGACTACCCTGGACACAAGCAAGATTCAGTACAACAAGGTAATGCTTATACATAAGAAATACCCAAATTTCAGATTATCTCAGAGTTCATCTGTATTTTCCTTACACCAGATATGATCAATGTTGGAAGCAAAAACATAAAAGTGTACTGTGTGTTTATTCTACAATTTAAGAGACAGAAGTATACTGAATGCTAATACAAAATATTTAGAACTATCATACATGGTACAAACATACAAACATACAAACATATACAAAATAAACTGATTGAGCCATCTCCTTTGGATCAAAGAGTGTTCATCATTGCTAATGCTGGCGTGTCTCCATTTTACTTTGCTACAGGACATTGGGCAGGCAATACTTGAAAGCTACTCGAGGGTGCTGGAAAGTTTAGCCTACAATATTGTCTCATGGATAGATGATGTTCTCATTGCAGATGGGAATGCCAGGAAAGGGCATAACATCAGAATGCAGAAGCAGGAGTTCAGCAAGCTTTCTCCTCAACAGTACTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA024308