BGIOSGA024439

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Revision as of 06:13, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA024439| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA024439, complete gene.| tag = P0613B0...")
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Gene Name

BGIOSGA024439

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA024439, complete gene.

LocusTag

P0613B07.147-2

Ensembl Transcript ID

BGIOSGA024439-TA

Ensembl Protein ID

BGIOSGA024439-PA

Length

3700

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:11747137..11750836

Sequence Coding Region

11750680..11750836,11750502..11750563,11750184..11750287,11749970..11750051,11749833..11749892
,11749689..11749743,11749550..11749569,11749362..11749445,11749208..11749272
,11748905..11748953,11748775..11748822,11748564..11748653,11748429..11748488
,11748271..11748330,11747935..11748009,11747773..11747858,11747451..11747544
,11747260..11747367,11747137..11747169

Genome Context

<gbrowseImage1> name=IndicaChromosome07:11747137..11750836 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:11747137..11750836 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGATCGTGAGATCCCACCGGCAGATCGCGGCGGAGGCGGCGGCCGGCGTAGGATGTGGCGGCGGGGCGGGAGGCCTGCCAACCTACCGGGTGGCGCCGCAGCTGGAGGTGCGGTTGGAAGAGTTTGAGCTCTTCGCCATCGACCGCCTCCGAGTATTGAAGGGGATCGCCGACGGGCTCTCGCGAGGGAAGAGACCGGAGGAAATGGAGAAATTGGTCAAGGAATTGTGGAAAGCCCATATGAGGCACCAGGATCCTACAGAGACTTTGAACAAGGACATAATATCTCACTTTGTTCTCCGTCTTGTCTACTGCAGAACGGAGGAGCTGCGGAAGTGGTTTCTCTCCATGGAGACTACGCTTTTTCGCTATCGCTTTCGGCTCGAGAGTCCTGAATCACAGAGGATGCTTATGAGTGAGTTTCAACTTCCATACAAAGCATTGCCACACTCGGAATTTGAGGCTGTCAAAGACAAGTTGAGCCAAGTTGCACGCACCATTGGTCAATCTGCAGCTGTTGAATCTGTGTTCTTCAAGGTGCCTTTTGAAGAAGTTCCAGATCTTGTTGCCAGCCGCCGAGTATTTCTTTCAAAAGGATATGCTTATGTTGCGATGAGTCAGGTTGTTTCACTTGTGGTTACCCAATTCCGCTGCAATATCTCGAAGGCACTTGTTTTAACAAATAGAAAATGGACGGCCACCATTAAGGAACAAGAAAAGGATAGGTTGACTCCTATTGTCGAAGCATTGAGTAATGCATATTTTGGACCTGATTACTCTCAGCCAAAGGATGCTGTTGAGATTTCTCTGAAGGATATTGACCAACTGGCTAAAACTTCTTTCCCTCTTTGTATGCGCCACATGCTAGAGAAGTTGAGAGAAAACCATCATCTGAAGCATGGGGGCAGAATGCAGTTTGGTCTTTTCCTTAAGGGAGCTGGACTAAAGTTGGAAGATGCTCTAGCATTTTGGAGGGCAGAGTTTTCTCAGAAGGTTGGCTCTGAGCGATTTGACAAGGAATATGCCTACAGTATCAGGCATAATTATGGAAAGGAAGGAAAACGAACAGATTACACTCCGTATTCATGTCAAAAGATTATCTCTGCAACACCTGGTGTTGGTGATCACCATGGTTGCCCTTATCGACATTTTGGTGAAGACAACTTGAGAGCAGCTCTCAATAAAATGGGAATCAGTGGTCATCCATTAGAAGAGATAATGGATAAAGTGAAGAACAGGCACTACCAGCTAGCTTGCACGATGACTTTTGAGGCAGAACATGGTGTCTCATGTGATACTGGAATCAATCATCCTAATCAGTACTTCAGTGAAAGCCAGAAAGTCTTGAAAGCAAAGAATCAAGCAGTGCAGAGCCAAGGAACAACCTAA</cdnaseq>

Protein Sequence

<aaseq>MEIVRSHRQIAAEAAAGVGCGGGAGGLPTYRVAPQLEVRLEEFELFAIDRLRVLKGIADGLSRGKRPEEMEKLVKELWKAHMRHQDPTETLNKDIISHFVLRLVYCRTEELRKWFLSMETTLFRYRFRLESPESQRMLMSEFQLPYKALPHSEFEAVKDKLSQVARTIGQSAAVESVFFKVPFEEVPDLVASRRVFLSKGYAYVAMSQVVSLVVTQFRCNISKALVLTNRKWTATIKEQEKDRLTPIVEALSNAYFGPDYSQPKDAVEISLKDIDQLAKTSFPLCMRHMLEKLRENHHLKHGGRMQFGLFLKGAGLKLEDALAFWRAEFSQKVGSERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISATPGVGDHHGCPYRHFGEDNLRAALNKMGISGHPLEEIMDKVKNRHYQLACTMTFEAEHGVSCDTGINHPNQYFSESQKVLKAKNQAVQSQGTT</aaseq>

Gene Sequence

<dnaseqindica>1..157#274..335#550..653#786..867#945..1004#1094..1148#1268..1287#1392..1475#1565..1629#1884..1932#2015..2062#2184..2273#2349..2408#2507..2566#2828..2902#2979..3064#3293..3386#3470..3577#3668..3700#ATGGAGATCGTGAGATCCCACCGGCAGATCGCGGCGGAGGCGGCGGCCGGCGTAGGATGTGGCGGCGGGGCGGGAGGCCTGCCAACCTACCGGGTGGCGCCGCAGCTGGAGGTGCGGTTGGAAGAGTTTGAGCTCTTCGCCATCGACCGCCTCCGAGGTGCGGGCGCCTCCTCTCCCCTCCCCACTGTGGCGGCGTTTGTAGAGTCCTTTTTTCCTTTCCTTCCTCGCATTCTGTGAACGATTTGACATCTAGACTGCTGCTGTGTTGGTCAGTATTGAAGGGGATCGCCGACGGGCTCTCGCGAGGGAAGAGACCGGAGGAAATGGAGAAATTGGTGAGCCGTCCTCTCTCTATATATCTCGTTGCAATTCTACCACGGAGATGCGAATTCCTTCATGTATTTGGGGCAAATTAAATTCCATTTCTTGCTGGACTTTTCGATTTCAATCTTGAACATAATTTCGCGGTTAGAGTTTCAAGCTCTAGTTACCAAGTTTACCATATTTTCTTTAACAGTAATCCTATCTGTTTTCCCTCCTTGTGCTTAGGTCAAGGAATTGTGGAAAGCCCATATGAGGCACCAGGATCCTACAGAGACTTTGAACAAGGACATAATATCTCACTTTGTTCTCCGTCTTGTCTACTGCAGAACGTAAGCTTAACATTCGTTACACTTGAGTACTTGACATTCCATAGACAGTAAGCCGGTGGTTTGCTTCTGGTGCTTTCAAGTTTGAACCTTTGACTAACTTCTCAAAGGCTTTGTGCTATACCCGCATTCTAGGGAGGAGCTGCGGAAGTGGTTTCTCTCCATGGAGACTACGCTTTTTCGCTATCGCTTTCGGCTCGAGAGTCCTGAATCACAGGTGACTTTCTGTCCTTTTCTTGCATACAAGGAAAGCTATCATGCTTTAACCGTTCCTTGCCACACTGTATTTTTCAGAGGATGCTTATGAGTGAGTTTCAACTTCCATACAAAGCATTGCCACACTCGGAATTTGAGGTATGTGTTATGGTCACTCTGTTGACTTGGACCTTGATGATTTCAGTAATATTTACAGTAGTGAGATGTTCTTGTTTTCACGTTTTTAGGCTGTCAAAGACAAGTTGAGCCAAGTTGCACGCACCATTGGTCAATCTGCAGCTGGTATGGAACATCTTACTATGTGATACCTGTTCTTTATGTTGTTTCAGCACAATGGTGCTTCGCTGCTTGCAGGTGTGATCTTTCACTTGCTAAGTTTGTTCTATGTTTTCGTTTTGCAGTTGAATCTGTGTTCTTCAAGGTATTTGCATCAGTTTATTTTACCTCTTCAATTCCATATCCAGTAGAAAAAAATTGTTCGTGTGATTACCCAGTCTAAATAAACCTTGTTCGTATCCATGTAAGGTGCCTTTTGAAGAAGTTCCAGATCTTGTTGCCAGCCGCCGAGTATTTCTTTCAAAAGGATATGCTTATGTTGCGATGAGTCAGGTTTGCTGCGAAAACGAGACTGGAAACTTCTATGTACTTTTTGGATGTTGTTTCCTGCCCATTCTAAACATACTTGTATAATTTAATAGGTTGTTTCACTTGTGGTTACCCAATTCCGCTGCAATATCTCGAAGGCACTTGTTTTAACAAATAGGTACATGGTACAAATGTTCTACTTTACTCTGCCTAGCTACATATCATGTCCGGGAAGTGTGCTTTCTTAGTTCTTTGCTGGAAAAATTGTTGCACTCTTAGGTGATATAATTAGGAACATTAACAGCATTGTCTACTATTTGCCAATAATTTACATAGAACAAAAGCCCCTTGACAGTTGGATTTATTTCTCAACTTAGAACACTCTTTAGTACAGGCTGTACTAAGCTATAATATAAATAATTCGATGTACAGAAAATGGACGGCCACCATTAAGGAACAAGAAAAGGATAGGTTGACTCCTGTGAGTATCAATTAACCACTTCCCGTATTCCTCCAGACAATCTTTTCATAACTTTTATAATCCACACTTTTTATCTTAACAGATTGTCGAAGCATTGAGTAATGCATATTTTGGACCTGATTACTCTCAGGTATGTTGCTTTATCTATAGGTGTTTTTCCAGATATTGTTAATGGGATTTTCTTCAATGCTAATGTTTACTATATTTGTTATTAATTGTCTGGCTTATCAAATATCCAATATTCTATACAGCCAAAGGATGCTGTTGAGATTTCTCTGAAGGATATTGACCAACTGGCTAAAACTTCTTTCCCTCTTTGTATGCGCCACATGCTAGAGAAGGCAAGGCACCTTAAAAGTTCACATACTTTGCTTACCTTATGATCAGGTTATTTAGTGATTGCTTTTATTTTTCAGTTGAGAGAAAACCATCATCTGAAGCATGGGGGCAGAATGCAGTTTGGTCTTTTCCTTAAGGTAATAACTTAATGAATTATCTTAATACTGGTTCTGTTATCAGTGAACACTTATTTTATTTATGTCACATTAACTTGCTTCTTAAAACTATGGTTTAGGGAGCTGGACTAAAGTTGGAAGATGCTCTAGCATTTTGGAGGGCAGAGTTTTCTCAGAAGGTGCCTAATTTTCTTTCAGAATGTAAACAGCAACTATGTTTTGGAAATAGCACATGCAAACCTTTTCTGTTTCTTTACAATACAAGTAAGCCGTGTCAAGAAAATTTTCTATAGGATCGTGTACTGCATTCTTATCTATAGTGTTGAACATTGAGTTAACCAGTAAGAAGCCCCAAACTAAACAAGTAATACCCCGTGTTGCATTGTGCAAGCCATCACAAATTATATTGCTTCACTGATGTTGGGTTTTCTTTGGATAAGGTTGGCTCTGAGCGATTTGACAAGGAATATGCCTACAGTATCAGGCATAATTATGGAAAGGAAGGAAAACGAACAGTAAGCCCCTTGTTCTATTTTTGTTGCTTGTTTGGATAATCAACTTATTCATCTCTCCGACAAATGGCTCCTCCAGGATTACACTCCGTATTCATGTCAAAAGATTATCTCTGCAACACCTGGTGTTGGTGATCACCATGGTTGCCCTTATCGACATTTTGGGTATAATCTCATTCTACCATGCCATTAACAGAGTAGTTAAGCATTTATTTGTTTTATGGTTAACTTTCTGTTATCAGTAGACTATTTATCGAATATGTCAATGGGACATGGGATTTCATATCCTAAAACTCTGTTAGCAGTAGACTATTTATCGAATATGTAAAAGAACCTACAGCTATCACTGTCTTTGTGAGTTACATGTGTCCTTTTCTTGTGTGATATTTCTAGTGAAGACAACTTGAGAGCAGCTCTCAATAAAATGGGAATCAGTGGTCATCCATTAGAAGAGATAATGGATAAAGTGAAGAACAGGCACTACCAGGTACTGCACCTCACAGTTCTACCTTTAATAAGCAATCTTCTAAACTTCGTCTGCTTGAACCATCTGAGTTATGAAATACACAGCTAGCTTGCACGATGACTTTTGAGGCAGAACATGGTGTCTCATGTGATACTGGAATCAATCATCCTAATCAGTACTTCAGTGAAAGCCAGAAAGTCTTGAAAGCAAAGGTGAGTCACCATAGTTGATTTGCATTCATTTGTGCATTTTGTCAGCATATGAGATGTTCAAATTGACAGTAATTTCGTTTTATTCCACAGAATCAAGCAGTGCAGAGCCAAGGAACAACCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA024439