BGIOSGA024492

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Revision as of 06:13, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA024492| Description = Putative uncharacterized proteincDNA, clone:| Definition = Oryza sativa Indica Group BGIOSGA024492, complete gene.| t...")
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Gene Name

BGIOSGA024492

Description

Putative uncharacterized proteincDNA, clone:

Definition

Oryza sativa Indica Group BGIOSGA024492, complete gene.

LocusTag

OJ1001_C01.112

Ensembl Transcript ID

BGIOSGA024492-TA

Ensembl Protein ID

BGIOSGA024492-PA

Length

2771

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:9819927..9822697

Sequence Coding Region

9822654..9822697,9822425..9822566),complement(9821544..9822116,9821155..9821309),complement(9820789..9820879
,9820571..9820687),complement(9820299..9820402,9820098..9820188),complement(9819927..9820025

Genome Context

<gbrowseImage1> name=IndicaChromosome07:9819927..9822697 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:9819927..9822697 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGAATGTTACTGGAGAAGGAATCTCGGATCAGATAGAGAGATTTCAAACACAGCTACAAATGGATGGGCGAGGGAGAAAGCACAGGATTTTGATGGTGTCAGATTTCTTCTTTCCAAACTTTGGCGGCGTGGAAAGCCACATCTATTATCTGTCGCAGTGTCTCCTTAAGCTTGGCCATAAGGTGATTGTCATGACGCATGCATATGGGAATCGTTCTGGAGTACGATATGTTACAGGTGGCTTGAAGGTTTATTATGTTCCATGGAAGCCATTCCTGATGCAGAATACATTGCCTACATTATTCTTGACATTTCCGATTGTGAGGACCATTCTTATTCGTGAGAAGATCTCTGTGGTGCATGGGCATCAGGCTTTCTCAACATTGTGCCATGAAGCACTGATGCATGCTAGGACGATGGGGTACAAAGTTGTCTTCACAGATCACTCGCTTTACGGTTTTGCTGATGCTGGAAGCATTCACATGAATAAGGTGCTGCAGTTTACTCTTGCAGATATTGATCAGGCCATATGTGTCTCTCACACAAGCAAAGAGAATACTGTCTTGAGATCAGGGATATCTCCAGAGAAGGTTTTCATGGTTCCTAATGCAGTTGATACTGCAATGTTTACTCCCTCTCCAGATCGCTTGAGCTGTGATGAAATTGTTATTGTTGTGATAAGTAGATTAGTGTATCGAAAGGGTGCAGACCTTCTTGTGGAAGTTATTCCAGAAGTATGCCGTCTTTTTCCTAAGGTTCGCTTTATTGTTGGAGGTGATGGTCCAAAACGTGTGCGAATTGAAGAAATGAGGGAGAAGTTTTCCCTTCAGGATAGAGTTGAGATGTTAGGAGCTGTGCCTCATGCTCAAGTGCGATCTGTTCTGATATCTGGTCATATTTTTTTGAACAGTTCGCTTACAGAGGCCTTTTGTATAGCCATTTTGGAAGCAGCAAGTTGTGGATTGTTGACAGTAAGTACTAGAGTCGGTGGTGTTCCAGAGGTTTTACCAGATGATATGGTAGTACTTGCAGAACCAGCTCCTGAAGATATGGTACGAGCTGTCAGGAAGGCTATCGATATGCTTCCTGGCATAGATCCCCAAGTTATGCATCTTCGAATGAAAAAGCTTTATAGTTGGGACGATGTGGCGAAAAGAACAGAGATTGTGTATGATCGTGCAATGCAGTCACCTCAAACAGATTTGCTAGAACGCCTTCCACGATACCTCAGATGTGGAGCTTGGGCAGGCAAACTGTTTTGTCTTGTTATGATCATCAACTACCTACTATGGTGCCTCCTAGAATATCTGCAGCCCACTGAAGGTATTGAAGAGGTCCCAGATATCAGGCCAGTACATGCTCGTTTAGAATCAGTAGATGATACATGTGAAACTCAAGGAAAAGGAATTTAG</cdnaseq>

Protein Sequence

<aaseq>MENVTGEGISDQIERFQTQLQMDGRGRKHRILMVSDFFFPNFGGVESHIYYLSQCLLKLGHKVIVMTHAYGNRSGVRYVTGGLKVYYVPWKPFLMQNTLPTLFLTFPIVRTILIREKISVVHGHQAFSTLCHEALMHARTMGYKVVFTDHSLYGFADAGSIHMNKVLQFTLADIDQAICVSHTSKENTVLRSGISPEKVFMVPNAVDTAMFTPSPDRLSCDEIVIVVISRLVYRKGADLLVEVIPEVCRLFPKVRFIVGGDGPKRVRIEEMREKFSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPAPEDMVRAVRKAIDMLPGIDPQVMHLRMKKLYSWDDVAKRTEIVYDRAMQSPQTDLLERLPRYLRCGAWAGKLFCLVMIINYLLWCLLEYLQPTEGIEEVPDIRPVHARLESVDDTCETQGKGI</aaseq>

Gene Sequence

<dnaseqindica>1..44#132..273#582..1154#1389..1543#1819..1909#2011..2127#2296..2399#2510..2600#2673..2771#ATGGAGAATGTTACTGGAGAAGGAATCTCGGATCAGATAGAGAGGTTAGCGATTATTAAGATTTTGCCACCATTTTTTTTCAGTCGAATGTTGTGTAGCAAACCGATTGATTTTCCTCTTTTTTCTTTCAGATTTCAAACACAGCTACAAATGGATGGGCGAGGGAGAAAGCACAGGATTTTGATGGTGTCAGATTTCTTCTTTCCAAACTTTGGCGGCGTGGAAAGCCACATCTATTATCTGTCGCAGTGTCTCCTTAAGCTTGGCCATAAGGTCCCTAATCTCCTGAATGGTCTATTTACTGCCTTGTTCTTTTCATGCATAATTTTAGGGACTATATTAGGGTCTAGATCAACTCATGGATATGCTTTTGATTCTGCCCCAGCTCACTTGTTATATGTAGTTTAAATATTGGATTTAATATCTTTCTGCTATAATGAGTTGATGCCAATAATGGTTAGAGGATTTTTGTTACATATCTTATCCAATCGTTAAATGATAGGCAGAGCCACACAACGGACTAAATTAGTGCTACTGATTTTGTTGCGAATGTTTAGACAACTTTTTTGTTTGATTCCCAGGTGATTGTCATGACGCATGCATATGGGAATCGTTCTGGAGTACGATATGTTACAGGTGGCTTGAAGGTTTATTATGTTCCATGGAAGCCATTCCTGATGCAGAATACATTGCCTACATTATTCTTGACATTTCCGATTGTGAGGACCATTCTTATTCGTGAGAAGATCTCTGTGGTGCATGGGCATCAGGCTTTCTCAACATTGTGCCATGAAGCACTGATGCATGCTAGGACGATGGGGTACAAAGTTGTCTTCACAGATCACTCGCTTTACGGTTTTGCTGATGCTGGAAGCATTCACATGAATAAGGTGCTGCAGTTTACTCTTGCAGATATTGATCAGGCCATATGTGTCTCTCACACAAGCAAAGAGAATACTGTCTTGAGATCAGGGATATCTCCAGAGAAGGTTTTCATGGTTCCTAATGCAGTTGATACTGCAATGTTTACTCCCTCTCCAGATCGCTTGAGCTGTGATGAAATTGTTATTGTTGTGATAAGTAGATTAGTGTATCGAAAGGGTGCAGACCTTCTTGTGGAAGTTATTCCAGAAGTATGCCGTCTTTTTCCTAAGGTGAGTCACAACCATAGCACTCTTTGGAGTCATGCATGAAATAAAAAGGGTGAACTATGGGTATGGTAGAACCATTTCGTTATATAACATATCAACATAAAGCAAAATGCGTACACAATAGTTGAACTCTCCTTATATTCCATCATAACTTTCCCATCCTTTTTAATGTTCACAATGTTTTGGATTTAGTAAATGGTCATATTTGATCAAGTAAGCAACTGTACGAACTGTCAGGTTCGCTTTATTGTTGGAGGTGATGGTCCAAAACGTGTGCGAATTGAAGAAATGAGGGAGAAGTTTTCCCTTCAGGATAGAGTTGAGATGTTAGGAGCTGTGCCTCATGCTCAAGTGCGATCTGTTCTGATATCTGGTCATATTTTTTTGAACAGGTAGCTATTTAATATTTGCATTGCTTTATGTTGAAACTTTTTTATTTCCTTAGTTCCTTTTTTTCATCAGGGATTGTTGATACACGTAAGACTGCTTTCTGTCTATCCCTTTAAATTAAATATCATCTTTCATAATACATAATGTTAACTAGACCCTAATATCATTACAAACATAGAAATGAACAAGTAATATGATATGATATTTTAACGATGGCAAAAGTTCAACTATATGGATGATCCACAATTACGCTGAAATTTAATCTTTGCCATTTTAGTTCGCTTACAGAGGCCTTTTGTATAGCCATTTTGGAAGCAGCAAGTTGTGGATTGTTGACAGTAAGTACTAGAGTCGGTGGTGTTCCAGAGGTATGTGCATATATGTTTATACATTTCTCTTGTAGAAAACCCTGTACTGTAGTTAATTAGGAAATTTGGAGTTACTGTCAAATAACTTTTTCCTTTTTCAGGTTTTACCAGATGATATGGTAGTACTTGCAGAACCAGCTCCTGAAGATATGGTACGAGCTGTCAGGAAGGCTATCGATATGCTTCCTGGCATAGATCCCCAAGTTATGCATCTTCGAGTGAGTCTCAACTCTTGCATGTTGCATGAACTTGCTGTGCATCTGCAGTTTACCGTTTCAGCTATGGGCTCTGTGCATTACATTTCCTTTTTTTTTCTTTAGTTTTTAGTGGAAAAGTGATTTGCAAGTTCATTTATATTGATTTGGTTGTTTCTAATATGTATCTAGATGAAAAAGCTTTATAGTTGGGACGATGTGGCGAAAAGAACAGAGATTGTGTATGATCGTGCAATGCAGTCACCTCAAACAGATTTGCTAGAACGCCTTCCACGGTGAGTATATTGCTTTTGAAACATTAACCTATTTTTGTTTACAATTTTTATGCACTGGGGCATCAAATATATAGGGATGCAGTCCATCTGATGTTTCTACAATGGTGTAGATACCTCAGATGTGGAGCTTGGGCAGGCAAACTGTTTTGTCTTGTTATGATCATCAACTACCTACTATGGTGCCTCCTAGAATATCTGCAGGTGAATTTCTGCCCATACTTTTATCATCTTCTGGAGATCTGGAGGAAATCTAACTAGTTCTTTTCCCCTCAGCCCACTGAAGGTATTGAAGAGGTCCCAGATATCAGGCCAGTACATGCTCGTTTAGAATCAGTAGATGATACATGTGAAACTCAAGGAAAAGGAATTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA024492