BGIOSGA024558

From RiceWiki
Revision as of 06:14, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA024558| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA024558, complete gene.| tag = OsI_254...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA024558

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA024558, complete gene.

LocusTag

OsI_25460

Ensembl Transcript ID

BGIOSGA024558-TA

Ensembl Protein ID

BGIOSGA024558-PA

Length

6616

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:7700054..7706669

Sequence Coding Region

7706321..7706669,7702438..7703697),complement(7701097..7701567,7700747..7700898),complement(7700054..7700689

Genome Context

<gbrowseImage1> name=IndicaChromosome07:7700054..7706669 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:7700054..7706669 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTACGGTGGCCGCCGGTCCTACGTGAACAAGCTAGCTCGCCGACCACGCTTAGGTGCGCTCGCGACCGCGTCGTCATTCCAGGCGGCGTTCCACATCTGCCCGGCATTGGCGGCGGCAAGGGCGCACTCACGGCGGCCCTCGAGGCTCAACCGTGCCGTGGCGCCTCCCCCCGGGGCCGGCGGCGACGACGCCCACGGCGCCATGCTCTCCGCCGGCGTCTTCGACTCCGTCCTCCGCAACGTGCTCCGCATCGCCCACTGCTTCACCCGCTCGCTCGCTGACCTCCACCAACGCCCTCGTCGGCGTCGCCCCGCCCGCGACTGGGCGCCGCCCCTCCTAGGACCAGGTATGAAAGAGAAGCACCGCCGCAAGAAGAAAACGGAGAAGCGTTATTGTGGCGAGAGGATTTTGATTTTTTTTAAGGATGCAGAGCCAACCGGTAATTTACCCGAGGATGCACAATCAACCAACAATGGTGAAGCAAAGAAAACAGATGATTTCATGAGTCAAGTTGCTTCATGTTTAAATATTATGCGGGGTCAACAACTTATACGTGAAGCAGAGTGGATGTCGCTCACGCAGAGTCGTGACTGGGCAGCATTCCGTGTCCCGACACCATTTCAAAAATTACTAGCCAATTGCAAGGATGTCCTTGTAGGTCATCAAGATCAACCAGGGACACAGCCAAGAGGGAGGCCTGGCAGCATGTGTCTCTTGAAGCCGGTTTTATTTAATGACTCCGGGACTTTTGATGTGCCACGTCATACTGCTACATTGGCACAACAGTTCATTACCTCAAGAACCAAGCGATGGTTGGAAGATCAGCCAATGCAGTTAAGGCTAGAAATTTCTCCCAATGACAAGCTAATGCTATGGGCTCGTATGCTAATGGTGAATCCGTACGACCGTACATATCTCAAGAAGGCCGGCGTACTCCGAGGCATAATGGCGTCTATTTACAAATGCAAGATAGATCCTTCATTAGTGGCCGCCTTTTTAACTTATTGGCATGTAGATGGACACACTTTACTCACCAGCCAAGGAGAGATGGGTTATCCTCTCCATACAATGTACGATGCCATGGGCATACCAATTTCAGGGCGCCTTTATGAAGAATTTATCCCTTTATCATCCACAGTTCGTGGATATGTGCAGACTCTGCACAATATATATGTTGAGGAGTGTCCCCTACAACTGAATGAGGGTCCTGGAATAGTAACCATCGCGACATGGGTCAATCACTTCTTCGGCGACCACCCTGTTCCTTTTCAGTCATTTTTACCCGATGGTTTTGCTGATCCAAAAGAACCTTTATATGAGGGCCCAAATTTTCGTGTTGAGATTCGGAATGGCCGACCCACTGGTATCATGTGCGGTCTTGAAATGACTTACGTACACACCTACCCATTGGTGGTGTACCGGGCAGCTTTTATCGCCGCATGGTTATGCACATATTGCGTTCCAGTGGAGGAAGGCAACTTTATTCGCCCCGAGGTTTTTACTATGGCAGTGGAAATCGCTCAAGGCAGCCGCCAGGCCATTGGTGTTACAAGCATGGCATTTTTATATCGTGCCCTGGACAATGTCTACCACCAAGTAGCTGCACGAGGTTTAGGAGGTAGGGTGGGCACACCTAAGCAAAGAACAGCCAAGTCTGTCTCGATCTCTCCTGAGCACCAGGAGGAGAGCGCTCAAACCGAGATCAAGACAACGTCGCCATTACCCACCTCGAGTGCGAACCCCACAGAGATTGTGAGGGTAGGACCCGACCGGTCTGGAAAAGACTTCGAGAAAATCAGAGCATGCATTGCCAACCCAGACAATGTCACAACTCATGTGTCTGCCCAAGCCTCACAACAGGAGTTACTATTGTTACCTCCTCGAAATGAGACTGCACTCAACTCGTCAGCCATGACGCATATCGACCCCTACAGTGAAGGGTTGGCTATTCCACATGATGATATAGGCACTCTGCCCACAGATCTTCTTACAGGCGATTTTTCTGATCTAGCCACTCTTTTGGAAGGAGGGGCAAACCCTGAAACCAGTCTCTGTTTAGATTCGCCCATTTTTCCAGCTTCACTGACTGGAGTTGAAGAGTTGTCCAATGAATCCAACAAGTTATCTATGGATGTTGAGCAAATCGTCGCACAAATTCTAAAGGCACCGAACGTAGACTCTGGTGCAGGGGAAAACTCCCAATTCAAGGAATTTCATGGGAACAACCCGTCTGAGATCAAAGCGTTTCAAGAATTACTCAAACAACGCCCGATACAGAAGGATATTGTGCTTAAAGAGATAAGCATCAATCTAGATTTGTGGAGTAACTTCTTCTCAAAGCCACCTCCTGAAATAATTAGGCTAATGGAAGGGTTACGTGTGCTAAAGAGAGCGCTATCAGAGGAAGCGCCACTGCCAACCACTAAGATTGACCATCATATTGATATGCTCCGCACTGCTCAAGACAAGGTGGAGTCATCATGCGTCGCTTTGGCAGCACTAACTAGTCAATATAACGTAGAACGGGCTGTAGAAGAAGGCAATAAGAGGGAGTGCTCTCGACAAGCCCAGAAAATCAAAGCAGAGATAGCAATGTTGCAAGCAGAACTTCAACAGGTGGAAGATGATTATTCCTGTGCTCAATGCCACCAAGATGTTGTAATAGAGAACTTGAACTCCCATCTTGAGCGACATCATCAAGCTAAGAATCGAGGATCTGAGATTGCGGCGCAGTTAGAGCAGGCGAGCGTACACCAAAAGTCTCTCCAAAATATTGTAGTCTTTACTAAGCCAGACGAGTTTGGTCTGTCCCAATATGTCTATAATATATTTGATTTTTTCATAGGCTGCTCATTAGATGAGTAG</cdnaseq>

Protein Sequence

<aaseq>MYGGRRSYVNKLARRPRLGALATASSFQAAFHICPALAAARAHSRRPSRLNRAVAPPPGAGGDDAHGAMLSAGVFDSVLRNVLRIAHCFTRSLADLHQRPRRRRPARDWAPPLLGPGMKEKHRRKKKTEKRYCGERILIFFKDAEPTGNLPEDAQSTNNGEAKKTDDFMSQVASCLNIMRGQQLIREAEWMSLTQSRDWAAFRVPTPFQKLLANCKDVLVGHQDQPGTQPRGRPGSMCLLKPVLFNDSGTFDVPRHTATLAQQFITSRTKRWLEDQPMQLRLEISPNDKLMLWARMLMVNPYDRTYLKKAGVLRGIMASIYKCKIDPSLVAAFLTYWHVDGHTLLTSQGEMGYPLHTMYDAMGIPISGRLYEEFIPLSSTVRGYVQTLHNIYVEECPLQLNEGPGIVTIATWVNHFFGDHPVPFQSFLPDGFADPKEPLYEGPNFRVEIRNGRPTGIMCGLEMTYVHTYPLVVYRAAFIAAWLCTYCVPVEEGNFIRPEVFTMAVEIAQGSRQAIGVTSMAFLYRALDNVYHQVAARGLGGRVGTPKQRTAKSVSISPEHQEESAQTEIKTTSPLPTSSANPTEIVRVGPDRSGKDFEKIRACIANPDNVTTHVSAQASQQELLLLPPRNETALNSSAMTHIDPYSEGLAIPHDDIGTLPTDLLTGDFSDLATLLEGGANPETSLCLDSPIFPASLTGVEELSNESNKLSMDVEQIVAQILKAPNVDSGAGENSQFKEFHGNNPSEIKAFQELLKQRPIQKDIVLKEISINLDLWSNFFSKPPPEIIRLMEGLRVLKRALSEEAPLPTTKIDHHIDMLRTAQDKVESSCVALAALTSQYNVERAVEEGNKRECSRQAQKIKAEIAMLQAELQQVEDDYSCAQCHQDVVIENLNSHLERHHQAKNRGSEIAAQLEQASVHQKSLQNIVVFTKPDEFGLSQYVYNIFDFFIGCSLDE</aaseq>

Gene Sequence

<dnaseqindica>1..349#2973..4232#5103..5573#5772..5923#5981..6616#ATGTACGGTGGCCGCCGGTCCTACGTGAACAAGCTAGCTCGCCGACCACGCTTAGGTGCGCTCGCGACCGCGTCGTCATTCCAGGCGGCGTTCCACATCTGCCCGGCATTGGCGGCGGCAAGGGCGCACTCACGGCGGCCCTCGAGGCTCAACCGTGCCGTGGCGCCTCCCCCCGGGGCCGGCGGCGACGACGCCCACGGCGCCATGCTCTCCGCCGGCGTCTTCGACTCCGTCCTCCGCAACGTGCTCCGCATCGCCCACTGCTTCACCCGCTCGCTCGCTGACCTCCACCAACGCCCTCGTCGGCGTCGCCCCGCCCGCGACTGGGCGCCGCCCCTCCTAGGACCAGGTGATGCCCTCGACGTGTCGAGCCACCGAACTCGCCTCCCCGGATCGCCGTCCTCACCGCGATATGCCAGAGGTTATTTTGGTCATTTATGCAAAAACCTGACAGATCAATGGATGCTAACATCAGTGAACTCACGGTAGTGACATGAGAGGGTGTGCAAATTTGATTCAATGGCATATAAGGGAAGAGCCAATTTTGTGTGGCATATCAGGGATCGGATCAAATTTCAATGGCATATAAGGGATTCTCTCTTCCATCAATGATGACCTTTTATCTTCGAAGGTTCTAATCGTGACACGTCATCACCAATGAGGATTGTTTGATGAAACATTTTGTTTGATGAAAACAAAATAACGAACACATAGAAAATAGGGAAACCCTGTATTTTATTAATCACGATTCATTAACATGAATGTTTACAAATACATCAGGGCTCCCATAGGAGTTCGCCTTTTGCCTTCGCGAGGAATACTTAATGGAAAGGTATGCTGACTAGAGATTGCGTGCAGTCCGCTAATTCCCGGTGCCTAGAAATGAGGCTACCGGTTAATTACATCCATAGGATGAGCCTATGGAACACCTCCGATTAAGCTGCGCTTTGTGATCGTCGTCTTCAAAATTAATTGCTCGACGAAGGTTGAGGTTGGTGCAGAAATTTAATGATAACTGTGATATAGGTGGCTTTATTTTGCCGAAACCTGGTCACAATATATTATCACCACGTCCATACATGAATCAGGTATTATAATAAAGGGGATGACTTTTGCCTCGTCGGTGCCCAGTCATATATGCCGGCCTTTATTAGATATGGATATATCGTTACTTTTGCCTCGTTAGAACCTAGTAACGTGTATCCGTTCCTATATGTTTGGACATGTTAATAATATCATGACTCCGGCCTCGTAAATGCTCGGCCATAATTTTTATCTTCCAAAGATCACGAATAGCTCCCATGCGTGTGCATGGTAGCAAAATATATTTTGTAAAACACCGCTTAGATTGTCCAATCACCAATGAAAGTGGACATATCTAGCACCGTTGTTATCGGTATCATAGTAACAAATACATGATCTAATCTCCAATAAGGGTCGGACATCTAATTTTGAGCATAGAAAATATCAAATAGTATTTGGATAATCCGATCGCCAATGAGGACCGGACCAGCCTTATACCATTGATTGTATAAAAGGTGTTTAATGATAACCGTGTTTTGGCTCTCATTGATCTGGCTTTAATCATCAAGATCAAGATAGATTAAGAACACGTAGATGTTCCGATCGCCAATAAGGACCGAACATCTATTGTGTTTAATCTAGAAAATTAATATTTATTCAATGTGCTCACCATCCAGCGCAAATATCCTGAATGGCGGCATGTTGTCGATAAATGACTCGACTTGTACCGGAGATAATTATGTGATTAACATGCCTAATAACGGTGGGCCCGTGTGTTTAATCGCCTGTCAATTTCCAAATTGGAGATAATGATCCTCACGTAGCAAAGCAAGTAACGATAGCACTTGCTTATTTCTTTTCTTTTAATTGCTCCAATCTTTTAAATTGTACATCGGATTTAAAATCCATTTGAACCATTACTTTCTATTCGAATTATACATCAAAACGAGTCCAATATCGAATATATTCAGACACCGTGATATTTAAAATTTCTGGGCCCACATCTCATATAGACACGTCTCGTATATATTTAATAAAATTGGGTGGCAGATAATATTTTTGTATAAAATTAAATGCCCAATAATTTATTATATCTTATATGAATTATTATTTTTTTTTGCACAAAAACTCATCAAACAAATGCCCCCCACCGAGTATAGTCTGTACGCGAAGTAGGACAGGCTAATACTCGGTGAACAAATCATCTATTCAGATAAACCTCTCATAAACGATTAATTTTGCTGGTAACTATCATCAGTATATCTCCAACAAGTCCGAGACGTATCAAAACTGATTAGTAATTAATCCGGCATGGACTCCATATCGCCGGGCATATATATTCTCAGCAGCCACGCCTGCCTAGGGTTTCGAATTTGTCGTCCTTCTATTCTGAAGTAATTTTCTCTAATCTTTGTTCGTCTCACTAGTCGGGACAAACGAACTAATCTACGTGATAAAGACCAGGTTTGCTCTACTTGACTATTTCTTGCTTTACATATCTTGCTAATACCTTGAAACCCTCACGATCAGGCATGTACTTTTCAATAATCTTGTCAGCTATTTTTGCCTCCCACTTTTGATAGTACTTTAAGATGGGGAGAGAGCAAAGAAAACGTTCAAATCCGTTTCAGGGCGAGCGAGCCAAAAAGAAACAAATCACCGGAGATCAACACGATCGTGATCCTGAATCGATTAATACGGAGGAGCAATGCGCCCCTACTGATCGCCAGCGAAACTCCATGGAATCTGGCAGTTCAGAAGGTTCTCGTCACATGCGCAGAGGATACCTTAAAACAACTGCTCACAATGTATGATCAACCTTGAACCACTTTATTGTTTTAAAACATAAGCGTGACCATACTACTTGCTTGATGAGCTTCCTGAACTTTTATTATTTCTCTTTTATTCTTACAGAAAATACCAATCTCAATGTACATATTATTTAGCAGGTATGAAAGAGAAGCACCGCCGCAAGAAGAAAACGGAGAAGCGTTATTGTGGCGAGAGGATTTTGATTTTTTTTAAGGATGCAGAGCCAACCGGTAATTTACCCGAGGATGCACAATCAACCAACAATGGTGAAGCAAAGAAAACAGATGATTTCATGAGTCAAGTTGCTTCATGTTTAAATATTATGCGGGGTCAACAACTTATACGTGAAGCAGAGTGGATGTCGCTCACGCAGAGTCGTGACTGGGCAGCATTCCGTGTCCCGACACCATTTCAAAAATTACTAGCCAATTGCAAGGATGTCCTTGTAGGTCATCAAGATCAACCAGGGACACAGCCAAGAGGGAGGCCTGGCAGCATGTGTCTCTTGAAGCCGGTTTTATTTAATGACTCCGGGACTTTTGATGTGCCACGTCATACTGCTACATTGGCACAACAGTTCATTACCTCAAGAACCAAGCGATGGTTGGAAGATCAGCCAATGCAGTTAAGGCTAGAAATTTCTCCCAATGACAAGCTAATGCTATGGGCTCGTATGCTAATGGTGAATCCGTACGACCGTACATATCTCAAGAAGGCCGGCGTACTCCGAGGCATAATGGCGTCTATTTACAAATGCAAGATAGATCCTTCATTAGTGGCCGCCTTTTTAACTTATTGGCATGTAGATGGACACACTTTACTCACCAGCCAAGGAGAGATGGGTTATCCTCTCCATACAATGTACGATGCCATGGGCATACCAATTTCAGGGCGCCTTTATGAAGAATTTATCCCTTTATCATCCACAGTTCGTGGATATGTGCAGACTCTGCACAATATATATGTTGAGGAGTGTCCCCTACAACTGAATGAGGGTCCTGGAATAGTAACCATCGCGACATGGGTCAATCACTTCTTCGGCGACCACCCTGTTCCTTTTCAGTCATTTTTACCCGATGGTTTTGCTGATCCAAAAGAACCTTTATATGAGGGCCCAAATTTTCGTGTTGAGATTCGGAATGGCCGACCCACTGGTATCATGTGCGGTCTTGAAATGACTTACGTACACACCTACCCATTGGTGGTGTACCGGGCAGCTTTTATCGCCGCATGGTTATGCACATATTGCGTTCCAGTGGAGGAAGGCAACTTTATTCGCCCCGAGGTTTTTACTATGGCAGTGGAAATCGCTCAAGGCAGCCGCCAGGCCATTGGTGTTACAAGCATGGCATTTTTATATCGTGCCCTGGACAATGTCTACCACCAAGTAGCTGCACGTCAGGCTTCTGCGAGTGACTGTTCTTCATTTGTGCCAGGCCATTTTATTATGGGCTGGTTTGCATCTTTTTGGAGAGGGGTTCCTATGTCAGCAACTTTTTCTTGCCTGGTGATGAACCCGCCCTTTATTATAGACTTCAGAGACTATGAGTCTATGGATATTAAGAGCGCACATAGCTTATTTTGGGATTTTAATGATGCTGGAACGACTTTACGTTCACTGGACTTCTTGGGACGGTCCAGCATCCGTTTTCCCATATCCGACCAGGAGGTCGAGTTATTTGATGACTGTTCTCCCAAGGCACACAGGGCAATTTCCATGGCAGCCGTGGATTTCTTAGTTAGCTGCACTGTTGGCAGCGTCACCTATAGGAGAGGAGAAGTTTTTGACAATTTGGTTTACTGTCCTCATCGATTCGCTCGCATGTTCAACTACGACCAGCATGTCCCCAATTTCCTTATGATCACCATTAACAGGACCACGTAGCCTTGATTTTCCAAGTTACCTGAATGGCAATTCTAGGGACGAATCGCTGCAACTTTTGCAACGGCGCCACCTAGCTTTTCATAGGCCGAGGGGTCACTCAATATTTATTCAACCTTTCGCCCGGGACACCATACGTTCACTTGATTACATCAACTGGTGCTCTCAAGCTTTCAATTTTCTAAAGCATCCGAGCCTATTCTGTTCACAGTCAAAACGCTCCACCAAAGCTGCATCTACGCAAAATGCACCCGGGGCAGAAACATCAGGCATGCAGTTTACCAATTTTTTTTTAAAGAAAAATATATACTCTATTATCAATCTGAATGGTCATTGGTTACTGTTTCCTCTGATTTATTTTCGTCCCCCTTCTTCTTTTTTTTAGGAGGTTTAGGAGGTAGGGTGGGCACACCTAAGCAAAGAACAGCCAAGTCTGTCTCGATCTCTCCTGAGCACCAGGAGGAGAGCGCTCAAACCGAGATCAAGACAACGTCGCCATTACCCACCTCGAGTGCGAACCCCACAGAGATTGTGAGGGTAGGACCCGACCGGTCTGGAAAAGACTTCGAGAAAATCAGAGCATGCATTGCCAACCCAGACAATGTCACAACTCATGTGTCTGCCCAAGCCTCACAACAGGAGTTACTATTGTTACCTCCTCGAAATGAGACTGCACTCAACTCGTCAGCCATGACGCATATCGACCCCTACAGTGAAGGGTTGGCTATTCCACATGATGATATAGGCACTCTGCCCACAGATCTTCTTACAGGCGATTTTTCTGATCTAGCCACTCTTTTGGAAGGAGGGGCAAACCCTGAAACCAGTCTCTGTTTAGATTCGCCCATTTTTCCAGGTGCTACTCAGAAGGACAACATTAATTCGCATCTCTCAGAGGACGATGAGACGCGTACCGAGGCTTGTGCTGATATAGGAAAAGGGGGCACCTCTCATCACACGGTACAATTCATTTATTTTATAGTCATTTCTGTTTGTTCCTTTTTTTATACAAATAATCAATTTCATGCACTCCCTTCCTTCTTATGTGTTTCAGCTTCACTGACTGGAGTTGAAGAGTTGTCCAATGAATCCAACAAGTTATCTATGGATGTTGAGCAAATCGTCGCACAAATTCTAAAGGCACCGAACGTAGACTCTGGTGCAGGGGAAAACTCCCAATTCAAGGAATTTCATGGGAACAACCCGGTGACCCTGCCGAAACTTCCAGCTAATGTTTCAGCTCGTGGTCTTAAACATGTCTAGTCTGAGATCAAAGCGTTTCAAGAATTACTCAAACAACGCCCGATACAGAAGGATATTGTGCTTAAAGAGATAAGCATCAATCTAGATTTGTGGAGTAACTTCTTCTCAAAGCCACCTCCTGAAATAATTAGGCTAATGGAAGGGTTACGTGTGCTAAAGAGAGCGCTATCAGAGGAAGCGCCACTGCCAACCACTAAGATTGACCATCATATTGATATGCTCCGCACTGCTCAAGACAAGGTGGAGTCATCATGCGTCGCTTTGGCAGCACTAACTAGTCAATATAACGTAGAACGGGCTGTAGAAGAAGGCAATAAGAGGGAGTGCTCTCGACAAGCCCAGAAAATCAAAGCAGAGATAGCAATGTTGCAAGCAGAACTTCAACAGGTGGAAGATGATTATTCCTGTGCTCAATGCCACCAAGATGTTGTAATAGAGAACTTGAACTCCCATCTTGAGCGACATCATCAAGCTAAGAATCGAGGATCTGAGATTGCGGCGCAGTTAGAGCAGGCGAGCGTACACCAAAAGTCTCTCCAAAATATTGTAGTCTTTACTAAGCCAGACGAGTTTGGTCTGTCCCAATATGTCTATAATATATTTGATTTTTTCATAGGCTGCTCATTAGATGAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA024558