BGIOSGA024813

From RiceWiki
Revision as of 06:18, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA024813| Description = CBL-interacting protein kinase 23| Definition = Oryza sativa Indica Group BGIOSGA024813, complete gene.| tag = CIPK23...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA024813

Description

CBL-interacting protein kinase 23

Definition

Oryza sativa Indica Group BGIOSGA024813, complete gene.

LocusTag

CIPK23

Ensembl Transcript ID

BGIOSGA024813-TA

Ensembl Protein ID

BGIOSGA024813-PA

Length

3699

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:2620845..2624543

Sequence Coding Region

2624373..2624543,2623778..2623840),complement(2623113..2623184,2622920..2623027),complement(2622751..2622831
,2622460..2622513),complement(2622207..2622332,2622023..2622112),complement(2621818..2621937
,2621614..2621730),complement(2621379..2621495,2621233..2621289),complement(2621040..2621114
,2620845..2620943

Genome Context

<gbrowseImage1> name=IndicaChromosome07:2620845..2624543 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:2620845..2624543 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGCGTGTCGGGCGGGAGGACGCGGGTGGGGAGGTACGAGCTCGGGAGGACGCTCGGCGAGGGCACCTTCGCCAAGGTCAAGTTCGCCCGCAACGCGGACTCCGGCGAGAATGTCGCCATCAAGATCCTCGACAAGGACAAGGTCCTCAAGCACAAGATGATCGCCCAGATAAAGCGCGAGATCTCCACCATGAAGCTCATCAGGCACCCCAACGTCATCCGGATGCATGAGGTGATGGCCAGCAAGACCAAAATATACATAGTGATGGAGCTTGTCACCGGTGGTGAACTTTTCGACAAGATTGCTTCGCGTGGGAGGCTGAAAGAGGATGATGCAAGGAAGTATTTTCAGCAGCTGATCAACGCTGTCGATTACTGTCATAGCAGAGGAGTCTATCACCGGGATCTCAAGCCCGAAAATCTTCTGCTTGATGCTAGTGGCACTCTCAAAGTATCAGATTTTGGGCTGAGTGCACTGTCTCAACAAGTCAGAGAGGATGGTCTGTTGCACACTACCTGTGGAACTCCTAATTATGTTGCTCCCGAGGTTATCAACAACAAAGGATATGATGGAGCCAAGGCTGATCTGTGGTCATGTGGAGTGATTCTCTTTGTCCTCATGGCAGGCTACCTTCCATTTGAAGACTCAAACCTCATGTCACTTTACAAGAAGATCTTCAAAGCAGACTTCAGTTGCCCGTCTTGGTTCTCTACAAGTGCGAAGAAGCTCATCAAGAAAATACTAGATCCTAATCCTAGCACCAGGATAACCATCGCAGAGCTTATCAACAATGAGTGGTTCAAGAAGGGATATCAGCCTCCAAGGTTTGAGACAGCAGATGTTAACCTGGATGATATCAACTCTATTTTTAATGAATCTGGGGACCAAACACAGCTTGTTGTCGAGAGGCGAGAAGAGAGGCCATCAGTGATGAATGCTTTTGAGTTGATCTCTACATCTCAGGGTCTCAATCTTGGCACACTCTTTGAAAAGCCATCGGGTTCTGTGAAGCGAGAAACAAGATTTGCATCAAGGCTGCCTGCAAACGAGATATTGTCGAAAATTGAAGCAGCTGCTGGACCCATGGGCTTTAATGTACAGAAGCGCAACTACAAGCTGAAGTTGCAAGGAGAGAATCCAGGAAGGAAAGGTCAGCTTGCAATTGCAACAGAGGTTTTTGAAGTCACGCCCTCGCTGTACATGGTTGAGCTCCGCAAATCTAACGGCGACACTCTTGAATTCCATAAGTTCTACCACAACATCTCCAATGGCCTGAAAGATGTGATGTGGAAGCCGGAGAGTAGCATAATCGAAGGCGATGAGATCCAGCATCGGAGGTCACCGTGA</cdnaseq>

Protein Sequence

<aaseq>MSVSGGRTRVGRYELGRTLGEGTFAKVKFARNADSGENVAIKILDKDKVLKHKMIAQIKREISTMKLIRHPNVIRMHEVMASKTKIYIVMELVTGGELFDKIASRGRLKEDDARKYFQQLINAVDYCHSRGVYHRDLKPENLLLDASGTLKVSDFGLSALSQQVREDGLLHTTCGTPNYVAPEVINNKGYDGAKADLWSCGVILFVLMAGYLPFEDSNLMSLYKKIFKADFSCPSWFSTSAKKLIKKILDPNPSTRITIAELINNEWFKKGYQPPRFETADVNLDDINSIFNESGDQTQLVVERREERPSVMNAFELISTSQGLNLGTLFEKPSGSVKRETRFASRLPANEILSKIEAAAGPMGFNVQKRNYKLKLQGENPGRKGQLAIATEVFEVTPSLYMVELRKSNGDTLEFHKFYHNISNGLKDVMWKPESSIIEGDEIQHRRSP</aaseq>

Gene Sequence

<dnaseqindica>1..171#704..766#1360..1431#1517..1624#1713..1793#2031..2084#2212..2337#2432..2521#2607..2726#2814..2930#3049..3165#3255..3311#3430..3504#3601..3699#ATGAGCGTGTCGGGCGGGAGGACGCGGGTGGGGAGGTACGAGCTCGGGAGGACGCTCGGCGAGGGCACCTTCGCCAAGGTCAAGTTCGCCCGCAACGCGGACTCCGGCGAGAATGTCGCCATCAAGATCCTCGACAAGGACAAGGTCCTCAAGCACAAGATGATCGCCCAGGTCAGCTCACCCATACTATTTTCTATCCCCCCAATCGATTCTCGATTTGGAGAGGTCTCCATGGATTTCTTCCCATGATGATAGTACTGTTCGAATTTCTCGCCTTCTTGTTTTTTTTTAATCATATCATACGCTGTTCTTGAGTGAATTTCGTGGACAATTTCAATTCCTATACGTACGAGTCCCAAATCATGAACAGTTTGTACTACTGCTGTTTTGTTTCCTCTCACGACAAGACGTGATGATTTTGTTTTAACCAGCAACAGTAAACATTACTAATTACTACTAGCGTTCTTGCTGCAAAAAAAAAAAAAAAGGTTTGGTATCGTTCCAAAATTGCGTTCTTACTTCCAAAATTGCAACAGCCTAGACTTTGACGTGAGGTTAGCACGGGCGCCTCGTGCAGTGTTCGTTGGAACTTGTGCTGAGTTAGTTATTATTAATGTGCATCAACTTTGGCTTAGCTTCTGACTTTTTGTGGGGGAGTTCTGACTTTGATGTGTGTTTGTGGTTTGTGTGGTGGTGTTTGCAGATAAAGCGCGAGATCTCCACCATGAAGCTCATCAGGCACCCCAACGTCATCCGGATGCATGAGGTTTACTAATCTCCAATCATTAATCTCAGCTCATCTTGCCCATGGAAAAATTTTGTAACTGATGATAAGTCCACCAATGAAATCGACTAATCATAAGCAGGGCTCGTGATTTTGGTTCGAAATTTTCGAAATTTCGGGTCTACCAGTGGGTCCTGGTTGGATGTGATTCCCAGTCTTGAATTGTGGATTTTTTTTTAATTTTGTAAAATTTGTTCGAATTCAGCTAGAGCCTGTTCAAAATTCATTTTTTTTCTGGTTTGAAACTTCTGAAAAATTTTGGTCCCCCCTGATTTTTTTTTTCTGGGCCGAGATTGTGAACCCTGCTAATTAAGTTAAGATATGGTTCTCAAGGCTTTGAGCAATCTGAAATTATGAAAAACCAGGGTAAATTAAATTGGTCAAGGATGACATAATGAACAAGTTGTTCCTTCACATGAAAAGTTGCAATTAGAGATCGTTCTGGAAGGAAATTCCTGTGACACTAAACTATGTGTTATCTGAAACTTTCCTAGCTCTTGCTTTCTGATATTTTCCTTTTGTTGTCTTGGCTTTATGTCGATCTCCACTTAGTGGTTTTGTTTTCTTCTCTGAAGGTGATGGCCAGCAAGACCAAAATATACATAGTGATGGAGCTTGTCACCGGTGGTGAACTTTTCGACAAGATTGTGAGTGCTTGGCCTTTTCTATCGACATCTGAATTACTCTTTATGCTATGCACGCATGTTCAATTTGTCATAATTCCTGTTATAGGCTTCGCGTGGGAGGCTGAAAGAGGATGATGCAAGGAAGTATTTTCAGCAGCTGATCAACGCTGTCGATTACTGTCATAGCAGAGGAGTCTATCACCGGGATCTCAAGGTTAGCGGCGTTTAACTGTTTGCGGTGTTTACTACTGCTATGCAAGAGAGCCGAGAAGCAGTGAATTGATACACAAATTCAATTTCAGCCCGAAAATCTTCTGCTTGATGCTAGTGGCACTCTCAAAGTATCAGATTTTGGGCTGAGTGCACTGTCTCAACAAGTCAGAGTAAGTAATTTGACTCTTCCTATTTATTCTTTTATTATCTTTTTGTGGAGAGTTTCCTTTTATTCAAAGTGATGAAAAGCCAAGAGTTGTTAGTCGTAAAAAAAATTAGCATTTCAATTGCTTTCTGTAGATTCCATTTGTTTTCTACATCTTTTCACATGGTAATACAGATAGTTTCAGATCCATCTGAATAAAGTTCTTACATTAGTGCTGCATATCTTTCTGTTTACTCTGCAGGAGGATGGTCTGTTGCACACTACCTGTGGAACTCCTAATTATGTTGCTCCCGAGGTACCTTCTTACACTCATACATTAAACTAGTATATAGTTATTATCATCGTTGGATTGAATATTTGTTCTCATGTTACTTATCTAAAAAAATATCTGTTCTCATGTTTCAATAATATTGTCTGTGCAGGTTATCAACAACAAAGGATATGATGGAGCCAAGGCTGATCTGTGGTCATGTGGAGTGATTCTCTTTGTCCTCATGGCAGGCTACCTTCCATTTGAAGACTCAAACCTCATGTCACTTTACAAGAAGGTTGGTCCCTCTTAACCATGTCAAAGGATTGTTGGTTTATGAACCCTAAACAAAGTTTTTGTTTGGAAGATTAATGTGATTATTGCTCATCCAGATCTTCAAAGCAGACTTCAGTTGCCCGTCTTGGTTCTCTACAAGTGCGAAGAAGCTCATCAAGAAAATACTAGATCCTAATCCTAGCACCGTATGTTTTGCAGCATTTTAACCTTCATTTCTTTGGAGCATTCTTATACATAAGTAGCTTATCCCATCGTTATCTCCTTGTGCAGAGGATAACCATCGCAGAGCTTATCAACAATGAGTGGTTCAAGAAGGGATATCAGCCTCCAAGGTTTGAGACAGCAGATGTTAACCTGGATGATATCAACTCTATTTTTAATGAATCTGGGGTAAGCTCTCACACCATTCAGCTCATAGCATTACATTCTTCATAATGCACTGGATGGGCTTGGTAACATCTATTCTAACTAACGCAGGACCAAACACAGCTTGTTGTCGAGAGGCGAGAAGAGAGGCCATCAGTGATGAATGCTTTTGAGTTGATCTCTACATCTCAGGGTCTCAATCTTGGCACACTCTTTGAAAAGCCATCGGTACGATCGCATTCTTAAATTGGTCATTCTGAAGTCTGAACTAAACATGTTCAAGTAAACTTACAGTCATGAGTTATAATCTAAAATGCTAAACCAATTTTCTTTCTACTTTTAGCAGGGTTCTGTGAAGCGAGAAACAAGATTTGCATCAAGGCTGCCTGCAAACGAGATATTGTCGAAAATTGAAGCAGCTGCTGGACCCATGGGCTTTAATGTACAGAAGCGCAACTACAAGGTAACTAATCCAAAATTCCACAACTTGTTTCTACCATTTTTATCTGAAACAATTAACATTCTGATGACACTTTTATGGATTGGAATCAGCTGAAGTTGCAAGGAGAGAATCCAGGAAGGAAAGGTCAGCTTGCAATTGCAACAGAGGTACACCAATGATACAACATCACTATTTACTATGTTCTGTCATTCTATATGCTGTGCAGCTTGTGCTACTACTCTTTCCTGGGTTTATAGACTGAAATCAGTTCATCCATTTCTAAAGGTTTTTGAAGTCACGCCCTCGCTGTACATGGTTGAGCTCCGCAAATCTAACGGCGACACTCTTGAATTCCATAAGGTACACATAACAGTAAAATTACTGCAGGACCTCACAGTTCATACTTCAGACTGGGATTCGGCTAACTCATGGTGTAATTTTTTACGCGTTTCGCAGTTCTACCACAACATCTCCAATGGCCTGAAAGATGTGATGTGGAAGCCGGAGAGTAGCATAATCGAAGGCGATGAGATCCAGCATCGGAGGTCACCGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA024813

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA024813&oldid=50407"