BGIOSGA024936

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Revision as of 06:20, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA024936| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA024936, complete gene.| tag = OsI_246...")
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Gene Name

BGIOSGA024936

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA024936, complete gene.

LocusTag

OsI_24663

Ensembl Transcript ID

BGIOSGA024936-TA

Ensembl Protein ID

BGIOSGA024936-PA

Length

5079

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:865384..870462

Sequence Coding Region

870377..870462,869516..869668),complement(867999..868128,867644..867838),complement(867122..867279
,866644..866734),complement(866458..866523,865935..866017),complement(865783..865846
,865619..865687),complement(865384..865443

Genome Context

<gbrowseImage1> name=IndicaChromosome07:865384..870462 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:865384..870462 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCCAAGGCCAGGGTCTACACCGACGTCAACGTGCTGCGCCCCAAGGAGTACTGGGACTACGAGGCCCTCACCGTCCAATGGGGAGTGCAACAGTATATTACCCTCTCAAGTGTTTGTTATGGTACTAGTGTTTACTGCTTGTTCTTCATCTTCCTAAGAAACGACAGGAAGATCATGTTCTGTAAAAGCGGCCAAACAAGGTCCTGGGACTACGAGGCCCTCACCATCCGATGGGGTGAGCAGGATGATTATGAAGTTGTCAGGAAAGTTGGGAGAGGAAAATACAGCGAGGTCTTTGAGGGTATTAATGTCAACAACAATGAAAAATGCATTATCAAAATTCTCAAGCCTGTGAAGAAAAAGAAGATCAAAAGAGAGATAAAAATACTTCAGAATCTTTGTGGAGGTCCAAATATCGTGAAACTGCTTGATATTGTTAGAGATCAGCACTCAAAAACACCAAGCTTGATATTTGAATATGTCAACAACACAGATTTCAAAGTGCTATACCCAACCCTGACAGATTATGACATCCGTTATTATATCTACGAGCTACTGAAGGCTTTAGATTACTGCCATTCACAAGGCATCATGCACCGCGATGTGAAGCCTCACAATGTTATGATAGATCACGAGCTTCGAAAACTCCGATTAATAGACTGGGGCCTTGCTGAATTCTACCACCCTGGCAAGGAATATAATGTCCGTGTTGCTTCAAGGTACTTCAAGGGACCTGAGCTTCTTGTTGACTTGCAAGATTATGACTACTCTTTGGACATGTGGAGTCTTGGTTGCATGTTTGCTGGAATGATCTTCCGCAAGGAGCCATTTTTCTATGGTCATGACAACCATGATCAACTTGTTAAGATCGCAAAGGTACTTGGGACAGACAGCCTGAATTCATACTTGAACAAGTACCGTATTGAGCTTGACCCACAGCTTGAAGCCCTCGTTGGAAGGCACAGCAGGAAACCTTGGTCAAAGTTTATTAATGCTGACAACCAACATCTAGTATCCCCAGAGGCCATCGATTTCCTTGACAAGCTTCTTCGCTATGATCACCAGGATAGACTTACTGCACGTGAAGCTATGGCACACCCATACTTTCTCCAAGTGAGGGCTGCGGAGAACAGTAGGCCTCGTGCACAATAG</cdnaseq>

Protein Sequence

<aaseq>MSKARVYTDVNVLRPKEYWDYEALTVQWGVQQYITLSSVCYGTSVYCLFFIFLRNDRKIMFCKSGQTRSWDYEALTIRWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDSLNSYLNKYRIELDPQLEALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFLQVRAAENSRPRAQ</aaseq>

Gene Sequence

<dnaseqindica>1..86#795..947#2335..2464#2625..2819#3184..3341#3729..3819#3940..4005#4446..4528#4617..4680#4776..4844#5020..5079#ATGTCCAAGGCCAGGGTCTACACCGACGTCAACGTGCTGCGCCCCAAGGAGTACTGGGACTACGAGGCCCTCACCGTCCAATGGGGGTGAGTGCCTCCCACTCCTACCTCGCTACCTCGCTCTTGCTTCCACCCTGTGTTGTCGCCTCTGCATCTGCGTGGGTCAGTTTAGATTCAGTGTCGGATGTTGCGTGCTGATACGTATGATAAAGCTTTTTAGTTACCCGTTTCATGACTTTGCAATCGCCGGTGTTATCATCAAGTTATTAGGATTGTAAATAGAATTGTTTGTGAATCAACTGCTGCTCTTGTTGTTATTGGAGTTCCATTGTTTCAGGTTGCATGTTAGATTAGTGATCTTGTGCGGAGAGCTGTCAAATTGTTTAGTTTAGATAGAACTCGGTCTTATTTATTGTTACAGTCGATTTCAATTAATTATTTGTTATACTCCAACAATACAAGCCAAGGATTATGCAATATACAGAGCTAAATTGAAGAATACGACTTAGTGTACACTGGTAAACCATGTCAATGAAATGACCGTGTAGATTATAATAAACTTCTCCTACATCAAATAATCATAAATTGGATCTATGCTAATATGTATTCTATCACTGGATCAAGGAAACCGCCTGATTAGCTTGGAATGGTTTTATTGGTACTGTATTCTTGTATTGGTGAAAGATGATATAATTAAGTGTAACAACCTGATATGAGCTGGGCTCCATGGCCTTTGTCTAGTATATGACTAACAGCTATCCTGATTGATTGTGATGCAATATGCTGTATGTCTAGAGTGCAACAGTATATTACCCTCTCAAGTGTTTGTTATGGTACTAGTGTTTACTGCTTGTTCTTCATCTTCCTAAGAAACGACAGGAAGATCATGTTCTGTAAAAGCGGCCAAACAAGGTCCTGGGACTACGAGGCCCTCACCATCCGATGGGGGTGAGTGTGTCCTACGTCGCAATTGCTTCGCGCCCACCCACCCACCCATGTGGGCAGCAGGCCCTCCCGCATTTGTTGCTGCCTGTGTATCTGCATGCGGTGAATTCATCCATTCAGTTAGATTCAGGGTTGGATGCTGCATCTGGAGTGTGTGCTGTTGGAATTCTAGACGTCGGTGATCCAGGGAAGGTATTGTTGGGTGCGAGCTTGATTGAGTCGTGCGATTTTTTTTATTCGCATATATTATATTGGGAAAATGGATATACTCCCTGAAATCATTGGGACAATTGATTACTTACTAATAATTTCTGTTCACTAGTGGCTACTTAAATTACCCATTTTTTGACTTGCGATTACGGTGTCATCTACAAGTTTGCATCGTAAATACATTTCTCTAAACCACGTACATGGAGGCAACAATAACACATAAACTGCTGTCGTTCTCATTGAATTCCCATTGTTTCAGATTGCATGTTAGATTAGCGATGTTGCGCAGAGGGCATGTTTTTTAGTTAGTTTCAATCTGTCGAATGATTTAGTTTAGATAGAATTGGGCTCATCATTTGGTGTTACAATTTAATTTACTTTGTAATAGGAATCCAAGGCATGCATCAATTGCTCTATAAGTTTAGAGTCCACGGGTCATACTGATCCTGTGGTCTTAAAACAGCTATTTTGGGCAGCAACCATGTGCAGCATTAAGGCTTGTGCTGAAGGATTGTTCTTCAACAGTTCAACCTAAGGATTAGAGTAACCATGTTATTTTTTTTAGTAAATATTCTTAATCAAGTCCATTGAAATGACTATATATGTTATAATAAACTTATTTTACTTAATTAACCATGACAATGGACCTTTGTCAATATGTATTTTATCACTGAATGAAGGCAATCATGTGATTAGCTTGAAGTGTTTTTATTGCTACTGTATTCTTGTATGGATTAAAGATGGTATGAATTAAGTGTAATAACCTGATAGTACTTTGGTTCTTTGGCCTTTGTATAGCTTGAAAAATAGATATCAGGATTGATTGTAGTGCATTATGCCTAGAGGTTATAGCTCAACAGCACATTACCCTCAAGTGCCTGGTCTGGCACTGGTGTTTTCTGCTTGTTCTTCATTTTCTAAAGACAGAACAGGAAGATCATGTACTCTAAAAGCAACCCAAAATAACTTTGGTTGTATATGATTACTTTAGCATGACGCATGTCTTCTCCCCACAAATATACCAGTGTTCATCACTTACTGTTTTGAATAGTGTACTTATATCTCCAGTCAATTAGGAATTCATGCTGTGAGTGAGCTCACAAAAAATGTCCAACTGGGCACTTATATTTTCCCAGCCTATCCTGTTAACAGTATCTGAATTTATGATCTCTTTGAGCAGTGAGCAGGATGATTATGAAGTTGTCAGGAAAGTTGGGAGAGGAAAATACAGCGAGGTCTTTGAGGGTATTAATGTCAACAACAATGAAAAATGCATTATCAAAATTCTCAAGCCTGTGAAGAAAAAGAAGGTAGTTCATGATTCATGAATCCTGTTGTCCATCCTTTTTTTCCTTTTCCCCTGAACATGCTCTTTTACTGGTAACATGGTACTGTTTCCATCTTACACCTAGCTTTGTGTCAATGGCATTAGTGTTTATTATTTTAACCATAGTTTTCTTTTGTATGCAGATCAAAAGAGAGATAAAAATACTTCAGAATCTTTGTGGAGGTCCAAATATCGTGAAACTGCTTGATATTGTTAGAGATCAGCACTCAAAAACACCAAGCTTGATATTTGAATATGTCAACAACACAGATTTCAAAGTGCTATACCCAACCCTGACAGATTATGACATCCGTTATTATATCTACGAGCTACTGAAGGTTTTATTCTTTCTCAATTTTTTGTTACTGTAACATTGCCAACAAGAAACTACTTATTCAGCACTTTTCCAGAGTATCGTTCTTGTTGAAATGAAATCTTTGAAATTTGCAACTATATGCATAATATCTAACTTCTAGTTCCAACTTATGCTTAATACTATTTTTCTTCCCTGAGGGCTTCTCTGTGTGCATGAAGGCTTTTTCTATGCTAGTAACGAGATGAAGAAATCTTTGCCCATGATAAAAGCAATGATATCATGTTCTTTTTCTTCTATAGGAGAATCCAAGTCATACATCGTTTGGTTTGAGCAATTTTTGGCTGATCCAATTATGATATAACACCCTTTTCTGTTGATGGGTGCAGGCTTTAGATTACTGCCATTCACAAGGCATCATGCACCGCGATGTGAAGCCTCACAATGTTATGATAGATCACGAGCTTCGAAAACTCCGATTAATAGACTGGGGCCTTGCTGAATTCTACCACCCTGGCAAGGAATATAATGTCCGTGTTGCTTCAAGGTAGGGGCACATACTGCTCTGTTAATGGGTTTATCATTTGATTTTCTTATAGAGTAATTAACAACATGTATTAATCTTAGTATGTTTGGTGAACTATTTAAGTTAGAATAAACTGGCGTGCAGTTTATTTGATGATTGTTTTGATGATTTACTGAGGCAATAGGCAAATCTAATTCTTGCGGATATTGGATTGTTTGCGTTAATGATGTTTAAAGTACTATGAAGAACAGAAAAATGCCAGCAGCATGAGCATATAATCACGTTTAAAGAATGTTTTCTGTAGCTACTATGTTTGCTGTGCCTGTACTACTCTCATTCCATATTTTCCCTGTTGCATCCCTTTCTTTTTTTTTTTTGGTTGACATGTTCTGTTTCACTGGAATTCAGGTACTTCAAGGGACCTGAGCTTCTTGTTGACTTGCAAGATTATGACTACTCTTTGGACATGTGGAGTCTTGGTTGCATGTTTGCTGGAATGGTATTACCATGACATTTATACATTACTTTTTCTCATTTCATCAATTTTGTAATGCAACTGCCTTTTTCTATAAAAGAATTAACTGGTGCTGATTCGCTAATAATGTGTTGTTGAGTGCAGATCTTCCGCAAGGAGCCATTTTTCTATGGTCATGACAACCATGATCAACTTGTTAAGATCGCAAAGGTGATTTCTCAGCTTGTTTATGTTAAAAGATGATGTTCATACAAGAATGAAATGCATTTCATGTTTAGCTTATCATTCATACTGTACACTATGGTTTATCTTATTTCATTTGCAGCTCAAGTTATCCATGTTTGATGTTAGGAATTGTTTCATTTGTTGTTATGATGCGATTAGTTCTGATAGTAATCAGGAGCAACAGTTGTAACGCTCTCCTGCGTGTTCGAGAAAAAAAAGTAACAGTTACAACTATTTTTCTCCGCTGAACTTTATTCTGGTCAAACTTAGTCACTAACATTTTATTCAAACTTGCACGTTAACTATGGACACCCTTCCTTTCTGTTGAGTACTGCTTCAGTAAAAGTCTTATTGAACTTGAGCTAGATATGTGATAAATCATCTTTAGTTATTTGTGTTGTTTCCCTGACTCCCTGCATTCACAGGTACTTGGGACAGACAGCCTGAATTCATACTTGAACAAGTACCGTATTGAGCTTGACCCACAGCTTGAAGCCCTCGTTGGAAGGTATATGAATTACAATTATATGTGATGCAATGCAAGACCTCTAGTTTTAATATGAATTAAAATTTTGACATTTTTTTTTCATATGCAGGCACAGCAGGAAACCTTGGTCAAAGTTTATTAATGCTGACAACCAACATCTAGTATCCCCAGAGGTATTTCCAGTGCCCCTTCTTCAGAGGTTATCACAAATGTACCTACTGTCATTAAAGTATTAATGGTTTTCAACATGATTTCTTTTCTATGTTAGGCCATCGATTTCCTTGACAAGCTTCTTCGCTATGATCACCAGGATAGACTTACTGCACGTGAAGCTATGGTAAGTAACTTGTTCTGCACTTCCTTTGATTTCCTTTTTTCTATGCAAAATATGCGTTTTACTAGTGTACAACATCATGATATTTTTTTTGCGATTGTTCCTGGGCATTATTGGTCTCTGACCTTTGATTTGGTGTACCATTGCCATGCACTTATATAACATTGGATGATTGCAGGCACACCCATACTTTCTCCAAGTGAGGGCTGCGGAGAACAGTAGGCCTCGTGCACAATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA024936

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA024936&oldid=50530"