BGIOSGA025111

From RiceWiki
Revision as of 06:23, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA025111| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA025111, complete gene.| tag = OsI_248...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA025111

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025111, complete gene.

LocusTag

OsI_24813

Ensembl Transcript ID

BGIOSGA025111-TA

Ensembl Protein ID

BGIOSGA025111-PA

Length

7159

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:1951157..1958315

Sequence Coding Region

1951157..1951323,1954566..1954763,1956279..1956367,1957027..1957118,1958007..1958055
,1958302..1958315

Genome Context

<gbrowseImage1> name=IndicaChromosome07:1951157..1958315 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:1951157..1958315 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTTTGGCGCTCGTCCGTAGCATCCGTGAGAATCTCCTCAACAAGGCCTCTTGCCCTCCTCACCCGATCTGCGTCTGGCCGCCCTCCGACTTGGAGGAGGACGACGACAACGACCTCGAGACGCTCCGTGCGATACAGCACCCACTTCTCGCACTACCATTCCGATTTTGTACAGTGCATTTATACAAATTTTGTTCCACTAAGGACACAATTCTAAGGATCTATGTTGCCCACCGGAAAACATTAAGGGGCGCACCCTGGGGCGATGGAGGGAGGTGCCACGTCGGCGATTTGCTACAGTCCTACAGTGCTCGGGGTGGTCGTTTTGCAAAAATAACCCTCCGGTTTGCTGGTAATTCGAAGATGCAACTAGGAACAATTTTCATCAGTATGCTCAAGATCCAAATGACCGAAATACTGGACAGATGTACCATGGATCCAATTATCATCAGTGCTACGATGTATGACTACGTGGTTACTGCTGATGATGTTGACACTCTTTTGGCTGTAGACTGCACGCCTATGGATGATAATACCTGTCAGGGTGAATTGGTTACAGAGTATACTAACAATGGGAGCAAGATAACTTGCGGTTTCACTGATTAA</cdnaseq>

Protein Sequence

<aaseq>MALALVRSIRENLLNKASCPPHPICVWPPSDLEEDDDNDLETLRAIQHPLLALPFRFCTVHLYKFCSTKDTILRIYVAHRKTLRGAPWGDGGRCHVGDLLQSYSARGGRFAKITLRFAGNSKMQLGTIFISMLKIQMTEILDRCTMDPIIISATMYDYVVTADDVDTLLAVDCTPMDDNTCQGELVTEYTNNGSKITCGFTD</aaseq>

Gene Sequence

<dnaseqindica>1..167#3410..3607#5123..5211#5871..5962#6851..6899#7146..7159#ATGGCTTTGGCGCTCGTCCGTAGCATCCGTGAGAATCTCCTCAACAAGGCCTCTTGCCCTCCTCACCCGATCTGCGTCTGGCCGCCCTCCGACTTGGAGGAGGACGACGACAACGACCTCGAGACGCTCCGTGCGATACAGCACCCACTTCTCGCACTACCATTCCGGTGAGTAAATTCTATCTCACCCTGTTTGTTCGTGGCATTGCTGTAAGATAAGCAATCCGAATTTATGGGATAGACTTGCAAGGTAGTCGACTCTTGATCAAAACATGAACTATCCAATGCAAATCTTCTATACAATATGCTATTGCACCAGGACACACTTTTCTTTTTGAATGAAATTCTCTAGGGTCTATACTGTTTCTGAATTGTTGAAGCTGTAGTGAGAAATTTTAAAAAGGCTGATGCAAATTTAATTTGAACATTGAAGCTATGGAATGCGCTTTACTACATATGGTGGTAATCATCGGACCTTATAATTCTATACGTGTGAATGAAACATGTTTAAACTACTGTAATTGTTCTTTAGAACTGAACCACCAATATAGGTGAATAAATGTGATGTGACAAAACCCCAGATTCTAGGGCATGCGTAACACAAAACACCAGATATTGTGATTTGTTTCAAGGAACCTCATGTTTTGAGGCAAAATGTTTCAAAGAACCTTAGGTTCAGCTTTATATTGTCGATTTGACTAATATATTTGTGCCTACTTATACGCATACTTATAAAAGGTAGAATATGATATTTTTAAAATGGAAAAAGTATGAATTACCACCCGAACTATCGCAGTCGACCGAATTACCCCCTGAATCCAAAAACCAGACATTGCTCACCCTAAACTTTCAATACCGACCGAATTACCCCCCTCGACCCAATTCAGAATGGTCTTGTCCTACGTGGCGTACGCGTGGCAATCCAATCAGCATTTTCTTATTAAAAAAACTGGTGGGGTCCACATGTTGTACTCTCTCATCTCCCTCTTTCTCCTCTTCCCCACTTCCTATCTCTCTCTGTAGCGCTAGCCGTCGGGAGCGGCGACAAGTGGCCAGCGACGGCCGTGGAGGGGTCAGCGAGGGCGCGCAGCGCGGCCCACGATGGAAACTATGGCGAGCGGCAACAACGGCGGCGACTACGGCGAGCGGCGGCAATGGTGGTGAGGGCACTCGGTGAGGCGGCAACTGCGGCGAGGTCCTCCTGCGCCTCTCCCCTGTCGGCGCTCGAGCGACCTCTGCCTTCTTCGCCGGGGGAGGCCGAGGATGCGGCGCACCCTAGCGGTTGCCGAGGACGAGCTCGGCTCAGCGGGGTTGGTTGTTTCGCGAGGAGATGCAGGGGCGGCCCTCGTCGGCGTCGTCGTCCGCTGCTGTTGCTGGATAGGCGTCCCTGCAAGCTCGCTCCACTCCCTCCCACTCCGTCGCTCCCCGTGTCCCCTCCCCTCGCCGCCACCCCCACTCCACCGCCCTCGGGATGATGAGAAGCCGCCAGAAGCCAGGGTGGCCTCTGCCAAAGCAGGGCTCGATGTTGATGCCGCCGCTGCGCCTGAGGCCCTATATGGCGCGGGACCGTGTGTTAGTGAAGAGAAGGAGGTGATGGCGATCGGTTTGGACACGAAGGAAGCGGAGAGTGGAGGAGTGGAGGCGACGGCTCGCCGCCCGTCCGCATCTCCGCCGCGCCGTGCGTGCCGCCATGAGCGCTGCAATCCGCGCCGACCGCCCCCGCCTACCGCCCGTCCCTGCGCCGCTGGGGCTCACCATCGACGCGCCGAGGGGGTTGCTGCTCGTCGTGTCCGCCGTGGACGTGGCCGCCCACAACTCCAGCTCCCTCCCGGAGTTCGCTGCCACCGCCTCTGCGTCCTGCGCCGCTGCCTCTGCGTCCCGCCGTGCTACCCACCGCGCGCCGAACGCCTACCGCCGCTCGACCTGGGCGTGAGAGAGAGGAAGAGTGAGAGAGGGAGAGAGAGAGAGAGAGTGAGAGACAAAAGAGAAAGAGGAAGTGTGAGAGATAGGAAGAGGAGTATGACAGGTGGGACCCACTTTTTTTATAAATAAAATGCTGACTGGATTGCCACGCGTACGCCACGTAGGACAGAACCGCTCTAGATTGGGGTCGAGGATGGTAATATGTCTGGTATTAAAAGCTCAGGGTGAGCAATGTCTGGTTTTGTGGTTCGGGGTGGGGGGGCGGGGCGTAATTCGTACTTTTTCCTTTTAACATTACCTGCATTTTCAACATGTGTTAGTTATAGATAGTATAACCTCTTTTGTGTAAATGTAATCGGTTAATATGTTATTATTAGTGAAGATCATGTTGAGCTTTTGCTATGATGCAGTACAATAGAAAAGAAGAAGATAAATTAGACTGGTGGTTTGTTCATCTTGAGCCTACTTATCTGAATATGTATTTAAAACATACCATATATAATAACGGAATGAGTATTTTACATAAATCTAGTGTTCCTTGAAACATTTTGCCTCAAAGCATGGGTTGCCTTGAAACCAATCGTACTTCCTAAGATGTTGCGTTACCCATGCCGCAAAATATGGGGGTTTGTGAAATTACATGTGGAGATTAGCCATAAGATGTTTTCTGTGTTTGTTCTTTTTAAGCTGCACATATCAATAGTTCAGTACATAATTGAAAATAAAGCATGTAGAGTCGTTGTGTACTTGATCCAGCAAAAGAGTGTCACATTACAATTAAATGAGAGCCCTTAGTATGTTGATTTGCTTAATGCAGGTACCTCCAGTGGGTCAGAGACAAATACAAAAACTGAGGAAATCTTTTTCGAAATAGACTTGATGAAGAATTTGATGTGGATAAGCAAAATAAAGAGGCAATTACCCCAATTGGGTTTCCTAAAGCTGCCTGCTGTTAGTGGATGCTCTTAAGAAGAACAGAGCATGCCAGAAGTTCATTAGAAGGTAGATTACAATTCAAGCGAAATTGAAGAAAATAAGAATCTTAATCTTAAGGATCATGTAAAATGCCTTTTGGATTATCAGTTAAGCCGCAGAAAAGAATTTGGCAAAATTTTGTGCCAAAATGAGGATCATTATGTTAGATTGTTTTCCTCTCAAAAGCCATGTGCACAATCAGCGAAGGTAATTATCATTTTGTGTCTACATCTATTTATTGGATGTTTACTAATGACATGTTATACCTGTGGATACATATCTGACATGGACCTTCTATTGCCTGAAAGTCACCAAGTTTCGAGATTGACATAGCAGAATCGATTCTCCTACATTCATTTGTAGTTAATTCACGGAGATAGTTGTAGTTTCCTGTATGAACAAAAGTTAATTAGTTTTGCATCACATGAACTAAATTAGATTTGACGTGTAACAGCTAGGATCATTTGGTGTTTCCCTATAAAGTTCATTGTTGTCAACTTGTCAACTTATAGATTTTGTACAGTGCATTTATACAAATTTTGTTCCACTAAGGACACAATTCTAAGGATCTATGTTGCCCACCGGAAAACATTAAGGGGCGCACCCTGGGGCGATGGAGGGAGGTGCCACGTCGGCGATTTGCTACAGTCCTACAGTGCTCGGGGTGGTCGTTTTGCAAAAATAACCCTCCGGTTTGCTGGTAATTCGAAGTAAGTCCCTAATAAACAGTAATTCCTCCGTTTCACAATGTAAGACTTTCTAGCATTGCCCACATTCATTTAGATGTTAATGAATCTAGACATATGTATGTGTTTAGATTCATTAACATCTATATGTATGTTGGCAATGCTAGAAAGTCTTACATTATGAAACGGAGGGAGTACCACTGAGGTGATATTTTATGTGGAGGCCCTTCTAGAATCCATATATTCCACGGGAACGAGAGAAAAATCGCGATTTAGGACCATGCTGTAAAAATCTAAAGCCAAGGGGTTTTTCCGAAAAATGGCGCGCACTAACCCTAACTACCCCAAACCCTATCCGCCGCCACTGAATTGGTTAAGGTGTCGATTTATATGTTTTCAACTCGCATATAGTTCTTTCATGTTAGTTTTTAAAAAGTTTCTTTCTTGTGACATGTCTGTGACTTAAAAATGATCACATGATGACAATGTGTTTGGATGAAAGTAATCATAGAGGCTCATATTTTGGGTGACTGCAGCCCAATGAATGTTGTTTCTAGAAGTAATTAAATATTGACTGCAAAAAATAGAGATATGAAACTTTCATGTTGTTATTCAATATGTCTGAAACTCCTGTGTGTCCAATCAGGATAAGCGTGTTGTTGCCTTGTTGGCTGTGTGCATGATTGTGTGTTTGTAGTGGCGAATTCATGTAAAATATGTTCGCACTCACTTTTACATTTTAATGGATAAATAATAGTCTTGTATCCAAGTAATCCAATACAATGAGATGTGGGGTGCTGTTGGACTTCATATTTATGTGCTGGAGGCATTGGTGCAGGTGGATTTTGTATATCTGTTGGCATGGCTGCTCATTGACATTGTATGCACCCTGTTTTAAACAGCTATAGTAGGCAGCTAGGCCACATACAAGGAACAGTCCCTTGTTGTTGTAAAATTGGCTGGTTTGGTCATATAATCAGTTTTAGATGGGGTGATTGAACAATAATAATTGTTCATTGTTCTTAAAAATGAGTGATGAATATGCATGCCCCAAGAGTGATAGATTCATACACAATTTCACATGCTTTAGAGTTACATCAAAGCAATGCCATTTAGACTTGGTGCAGAAGGGCACAAGCTCACAGCACAATTATGACAGTTTTGAATATTTGCTTATGGAAGGTCAAATGTCAATTGAATAGCTTGAATATCATATAGAGTTGATCATGCCCTCTGCATATTTGCATGTAGTTGTTGCTTTTAGTTGCATGTTACACCAGCCATTTACCTGTTATATTGTAAGATACTGTCGCTAATGAATTGATATTTCAAAAGATTTGTTTTAGACACTCTATTTATTTTACTGATTCAGGACAGTCTAGGTGAGATAACTCAACCTGCACACATATATAATAATCCCAATCATCAACAAGCAACTCTGTTGAGGCATGGACCTTCCCAATACGGTATAGAATACATGGCCCTCTAGCTAGCTTGTGTAATGATGTAGCACCATGCATGACCTGATCATATCTGCAGGATGCAACTAGGAACAATTTTCATCAGTATGCTCAAGATCCAAATGACCGAAATACTGGACAGATGTACCATGGATCCAATTATCATCAGTATGCCAAAGTTTTGTTTAAGAGATACTTGTACGAATTACAGTTATTAGCTGTCCAATTAATCTGTCATCTGATTGAAAAGATCCTTCATCTGATGTTTAACTACCCTTCCTTTCAGGGAAATAGTAGCTGCTACCCCTCTAATTATTTTGAAGAAAATAATGGTCCTAGAGAAGTAAGATTACACGACTCACAGTTCTATAGGCAGGATAATCAAGAGTATTCAACTGATGGTAAATAAAGAGCAAATCAAGCAACTAGAAAATATTCCACATCATATTGATTGAATTTTTTGTATTTATTATCTAGATGATCCTTTGCCTGGTATTGAGGGGTTTCAAATTGTTGGGGAGCCTAGATCATGATTTACATTAACAGCATGTGGTTACCCTACCAATGGTACTACCCTTTGTAATTTCCAGGTTTGTTGTGTTCTGAGTTCTGATTCCAGATTGCAATTACTTATCTTCTCTATTAATTGTTAACTTCTGCAAATAAAACCTCTCATTATGAAATGCTGTTGTTTTAATGGGTTAGATATCTTGAGAATGGCACCAGGCAGTCAATTGAAAGTAAATAGAGATTATTGCTCATTCTATTTGTTGCTGCTTAGAAATAATTTGATTGTATTGATTAGCTCTCTATATTTTGCAATTCAGGTGCTACGATGTATGACTACGTGGTTACTGCTGATGATGTTGACACTCTTTTGGCTGTAGACTGCACGCCTATGGATGATAATACCTGTCAGGTTATTCACTTATCTGCTGTAAACTGCAGTACAATGTGGTTATTTCATGTGGTCAATCATATAATAGTGGCTAAGTCTAAAGAGTTTGGCAACATTCATTTTGAAACTTATCTCTTTGCTAATTGGAGGGAGTGTAAACTTTTAGACGTAAAGCTGGGATCCCAGGGAAGGAAATCCATCAACTGACTTGGGAGCCATCTCTCCTTCAGAGGGGGTTAGAACTTTTTTCTGTGTCTAGCTGTTCAAATTTTGGTCCTGTGTCCTGTACATGGTATTGCGTATTAACCCCATTAACTGCTTTAGTCTGAATGTGTTCTTTTACTGGGAGTGTGCCATCCTCAATTTTTTGTGAGGCTTTCAGTGGCTTCTCATTATTGGTATTCTCTAGAGGCTTACATCCATTTTGTCTCTTCAACTACATGTTAACTATATGGTTTGAATTATTATTTTGGGTATTGGAATCTTCTTGGCATTCTGATAGCCTGATATTGTTCTGTTGCATCTTTTCATCCTTTACTGCATCAATTGGGTAGCTTACAGAGTACAACCCATTTTTGGAAGCTATTTCTTTATTGCATCAACCAGAAAAAAAAGATTAACTGAGTCATAAATAACTGTCCCTTTGTGTGTTTGTTGGTATTCGTTTTTATATATATCTGATATATGTAATAAGCGTACATAAAGGTTGGCACATCGGCTTTCCTTTTTGAGCAAAGATGTGCTTGTGCACTGATAACATGAGTGTGCTTGAAATCTGTTGTTAATTCATGGGCCTGAACTTCTAAACAGAATTATCCACACCACAGACACATGAATATTTTACTATGTCAGTAATTACACCTAGGAACTATGCATGTTAATTTGATGAGCCGCTCTTCTTCATTGTAGGGTGAATTGGTTACAGAGTATACTAACAATGGGAGCAAGATAACTTGCGGTGAGTTTATGATGCATGCGTTGCTGGCTTGCTGCCATTTTTGGGCCATTAATTGAATGAATTTATTATATTGGCAGTCCCTGCTTCAATTTTGTTTATCAACATATGGGAATTGTTATACTTTCAGTGGCACATTTTTTTAAATTTATTAAACAATGGTTGTATTTTAATACAAAGTAGACAAAGGCATCCTGTTGGCAAAAGGGCAATTGCACCTTCACAAGTTGAATCTTTATGATTTTGTAGGTTTCACTGATTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025111