BGIOSGA025178

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Revision as of 06:24, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA025178| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA025178, complete gene.| tag = P0455F0...")
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Gene Name

BGIOSGA025178

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025178, complete gene.

LocusTag

P0455F03.22

Ensembl Transcript ID

BGIOSGA025178-TA

Ensembl Protein ID

BGIOSGA025178-PA

Length

3440

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:3000729..3004168

Sequence Coding Region

3000729..3000760,3001044..3001131,3001255..3001312,3001422..3001465,3001569..3001649
,3002352..3002422,3002497..3002607,3002819..3002901,3003159..3003375
,3003839..3003922,3004093..3004168

Genome Context

<gbrowseImage1> name=IndicaChromosome07:3000729..3004168 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:3000729..3004168 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCCACCGGCGTCAAGCTCATCGGCGAGGGCATCTACCACGGCAAGCAATGCCACGCCGCCGACATCCCCGCCGTGCTCGCCCGCGCGTGGGCGGCCGGCGTCGACCGCATCATCGTCACCGGAGGCTCGCTGAAGGAGTCTAGGGAAGCGCTCGAGATCGCCGAGACCGACGGGAGGCTGTTCTGCACGGTGGGCGTGCACCCGACGAGATGCGGGGAGTTTGAGGAGAGTGGAGACCCGGAAGGGCATTTCCAGGCGCTGCTGGCTCTGGCGAAGGAAGGAATTGCGAAAGGCAAGGTTGTAGCAGTGGGAGAATGTGGTCTGGATTATGATCGACTTCACTTTTGTCCATCGGATGTACAGAAGAAGTACTTCAAGAAGCAATTTGAATTGGCTGAAGCAGTAAAATTGCCAATGTTTCTTCACATGCGGGCTGCTGGTGAAGACTTCTGTGAGATTGTGTCAGAAAATCTGTATAGATTCCCTGGGGGTGTTACACACTCCTTCACTGGAACTGCAGAGGACCGTGATAAGCTTCTTTCCTTTGAAAAGATGTTTATAGGTATTAATGGATGCTCTCTGAAGACTAGTGAAAATCTTGAGGTTCTACAAGGTATTCCTGCAGAGAGGATGATGATAGAGACAGACTCTCCATACTGTGATATTAAAAATACTCATGCTGGAATCAAGTTCGTGAAGTCTGTCTGGCCATCCAAGAAGAAAGAAAAGTACGAGCCGGATTCTACAGTAAAAGGTCGCAATGAGCCCTGCTTAGTCAGGCAAGTTCTTGAGGTTGTAGCTGGATGCAAAGGAATTGCTGACATTGAAGGCTTAAGTAAAACTCTGTACCACAACACGTGCAGGCTCTTCTTCCCTCAGGACCTGGATGCTTCTGCTGATGCACAGCTTGAGAGTGGTGCGTTTATTCAAAATAGCTGA</cdnaseq>

Protein Sequence

<aaseq>MASTGVKLIGEGIYHGKQCHAADIPAVLARAWAAGVDRIIVTGGSLKESREALEIAETDGRLFCTVGVHPTRCGEFEESGDPEGHFQALLALAKEGIAKGKVVAVGECGLDYDRLHFCPSDVQKKYFKKQFELAEAVKLPMFLHMRAAGEDFCEIVSENLYRFPGGVTHSFTGTAEDRDKLLSFEKMFIGINGCSLKTSENLEVLQGIPAERMMIETDSPYCDIKNTHAGIKFVKSVWPSKKKEKYEPDSTVKGRNEPCLVRQVLEVVAGCKGIADIEGLSKTLYHNTCRLFFPQDLDASADAQLESGAFIQNS</aaseq>

Gene Sequence

<dnaseqindica>1..32#316..403#527..584#694..737#841..921#1624..1694#1769..1879#2091..2173#2431..2647#3111..3194#3365..3440#ATGGCGTCCACCGGCGTCAAGCTCATCGGCGAGTGCTCTACTCTCTCTCCTCCCTCTCCTCCCTCTCGCTCGCGACTCTCATGCTTCTACCTGGACTGACCCGGCCTTCTTCTACTCCTCCTCTCATCTTCTTCTCCGTCTCCGGCGCCACCGCGACGAGCAGACATCGCCGTCAACTTCACCGGTACCCACCTCCTCCTCTCCTCACGATTCTTATCTCGTTTTTCTCGGCTCACTGTCTGGCTCTCACGCTTTTCTACTTGCGTCTTGCTCTTTGCTGCTGCGATGCGAACGAACTGAAGATGGCATGTTCAGGGGCATCTACCACGGCAAGCAATGCCACGCCGCCGACATCCCCGCCGTGCTCGCCCGCGCGTGGGCGGCCGGCGTCGACCGCATCATCGTACGCTGCTTTGCTGCCGGCCATTCCCCCTTTCGCCTTCTTTCTTGCTTGGTTTCTACTTTCTTATGGCTCGGCTTTGGTGTGCTTAATCTCTTGCTTTCTTTGGTTTGGTCCGGGCGGAAGGTCACCGGAGGCTCGCTGAAGGAGTCTAGGGAAGCGCTCGAGATCGCCGAGACCGACGGTGAGCTCAGCTGCTTGGATGCGGGTTGTTTTGACTATGTTCTCCTTGGTGCCTTCAAGGTGTTTGTTGTAATGTGCCTGAGAAGCTGTGATGTGCTTGTACGATGCAGGGAGGCTGTTCTGCACGGTGGGCGTGCACCCGACGAGATGCGGGGTAGGGGTGGATTGTGTTCCATTCCTCTTTCATTGCTGGTACCTGAGATTGGCGGGTGCCTTTTGCGATTGGGTCATGTAATTAGTGCTTTGCTGAATGTTAGGAGTTTGAGGAGAGTGGAGACCCGGAAGGGCATTTCCAGGCGCTGCTGGCTCTGGCGAAGGAAGGAATTGCGAAAGGCAAGGTGTGTGTATCACTTGTCCTGCAGGTCTATCATGTAGTGAAATGTTTCTTTTAAGTTCACCTGGGGATCCCCTCCTAAATATATAATATATTTGGCATTTCTTTTTCAAAGACCATGCAAATAGTAAGAGAACATATAGGGTGGCAGAAAGTACCTGTTTCCATATAGGAATTACATGTCAACCATCGGGTTTTTTTCAGGAATTAGATATCTTAAATGCATTGTCGTAGCAGTCTTGTTCTTGAGGGAGGTAAGCTATTGAAGATCACCCATTACAGTGTTTCCAGATTCTCCAGAAGAATAGTAAGAAGAAAGTGCTGAAATGCTGCTGTGGTAGTGCTTGATCTGCTTGTAGACTTCCCAAGCCGTGTCCTGTAGTGAAATGTTATTGCAATCTTGCAATATATTTTGCTTGAAAATAATTGGACTCACTGAATTATGTCTGTAGTTCTTACTATTAACAGAAGACCAAAATCATTGAGCAGCAGAGTTCTATCTTCTTTGCAGTATGCATTTTCTATTGGTGTTGTAAAGTGCAAACAAACTCACTATGTAACAATATCTAGTTATAAATATACCCTGAGTTGGATTCCCTGAACATATAATCTTTTGCATAAGTAGTTCAGTTATTTACTTACTCTTTTGTTCTGTCTTTCGGAGTCAAAACTTGCAATATTCTGATATGGCTTTCAATTCCTACAGGTTGTAGCAGTGGGAGAATGTGGTCTGGATTATGATCGACTTCACTTTTGTCCATCGGATGTACAGAAGAAGTATACTCTCACATAAACACATCGAATAATGATAGTTATTCACATATTTTTCTGAGCAATTTTATACTGTTTAGGTACTTCAAGAAGCAATTTGAATTGGCTGAAGCAGTAAAATTGCCAATGTTTCTTCACATGCGGGCTGCTGGTGAAGACTTCTGTGAGATTGTGTCAGAAAATCTGTATAGGTAATACTCAATCTGTATACCAATACTATATAGGCAAGGAGCCAAGGACTACTGAGGAGTACTGCTTTGTACTCCTCCAGTGTTCTAGATCAGCACAATTAAAGAAGCTGACAATAAGATTTAGTTACGTTTCTTTATGTCTCACTTTCTGAAAATCACTTTGACGTATTTGCATATTTTCAAGTCTGAGAACCATATTTCTCCATCGCAGATTCCCTGGGGGTGTTACACACTCCTTCACTGGAACTGCAGAGGACCGTGATAAGCTTCTTTCCTTTGAAAAGATGTTTATAGGTCATCTCCTTCCCACCCCTTGATGTTACAAATTTGCATGTGCTGCACCTTGATAATTATAGAACTCAGAGTACCACAACACTTCCATTTGTAGTCAAAATTCATTTCAGTTTCTGCCGCAAGTTCGTTCTTTTTTGGTGAAGACCTCCATTTGGGCAATTAGATGTGAATACAAATATTAGTAGCAATTAAAACGTCTCATTCCATTATAATTCAGTTATGTCAGGTAAACCATACTGACTTAATGTACAATGCAGGTATTAATGGATGCTCTCTGAAGACTAGTGAAAATCTTGAGGTTCTACAAGGTATTCCTGCAGAGAGGATGATGATAGAGACAGACTCTCCATACTGTGATATTAAAAATACTCATGCTGGAATCAAGTTCGTGAAGTCTGTCTGGCCATCCAAGAAGAAAGAAAAGTACGAGCCGGATTCTACAGTAAAAGGTCGCAATGAGCCCTGCTTAGTCAGGTAATTCAACACAATTATGCATAAACTCTAATAAGGTTATTGTTCAGTAAGTATTTGACTGGCCTGCAATGCATGAACACCTGAAGTTATTATTTGCTTTTCATGCTCCTTTTACTTGGTTCTTCTGAGGAAACACAGTAGAAGTAATGCTCATCATTCTGAGAACATTAAACTATTTTGTTATTACCACATGCTTGTTGAAATGTCTTACTTGACTAACAAAATACTGACCATTGGCAGTTCAATATGATGTTTTGCAGATATTTATTTGGTTAGCATTTTCCATAGATGCAGAATCATTTGCCCAGATTTTAAATCAATTTAAATTCTTATCATAATCAATCATGAATCTTTCGATGGAACGGAAATTGATTTCATCAACCTTTTCTTTTGTTTATACTTTACACTTGCGCCTAACTTTTTCCTCCAAGAAAATTAATAACTGAAGATACATCAATCCCAGGCAAGTTCTTGAGGTTGTAGCTGGATGCAAAGGAATTGCTGACATTGAAGGCTTAAGTAAAACTCTGTACCACAACACGTGCAGGTAAGCTGTCCGTGCGTCATGCCTTGCTGTCTGGTCTAAGTACTCATCTAATGCAGTCAATTTCTCTAAATTTTACTAGTAATTTTGTCCTTGATGCTACAGCTCTGCATGTCTCCAATTTTCATCAGATCATGTTATTGAGCTCAATCTTTCATTTCTCTACCTTGCAGGCTCTTCTTCCCTCAGGACCTGGATGCTTCTGCTGATGCACAGCTTGAGAGTGGTGCGTTTATTCAAAATAGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025178