BGIOSGA025185

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Revision as of 06:24, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA025185| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA025185, complete gene.| tag = OS07G01...")
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Gene Name

BGIOSGA025185

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025185, complete gene.

LocusTag

OS07G0160000

Ensembl Transcript ID

BGIOSGA025185-TA

Ensembl Protein ID

BGIOSGA025185-PA

Length

6576

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:3100786..3107361

Sequence Coding Region

3100786..3100898,3100984..3101214,3104031..3104157,3104244..3104303,3104383..3104475
,3104588..3104884,3104965..3105276,3105372..3105629,3105742..3105890
,3105985..3106617,3106882..3107155,3107251..3107361

Genome Context

<gbrowseImage1> name=IndicaChromosome07:3100786..3107361 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:3100786..3107361 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCACCGCCGCCACCGCCCAGGCCTCCGCCTCCTCCTCCACCGCCTCCACCCGCGGCTCCCCCGCCGCCTCCTCCTCCTCCCACTCCGCCGTCTGCCTCGTCCCCTTCAGGTGGTGGGCGAGGGTGAGGGAGGAGGCGCCGCCGGAAGGCGGGGTGAGGTACGCGGCGACCGCGGCGGCGTCGCCCTCGTCGTACTACGGGCTTCGCTTGCTCCACAGCTTCCTCCACCCGGATCTCGTGCTTCGCCTCGAGCGCGGGGGTTGCCGCGGCACGGGTGCCGGCGCCGGGGGGCGGAGCTACGCGCTCGTGCCGGCCGACGAGCTCTCGCGTGTGCTCGCGAGGCAAAATTCTAGTTTGGCATTGCATAATAAACATTCATTTGCTGAGGATAGTGCTGGTGCGTACCCTTTGGTGCTTAGGATATCTGTTCGAGAAACAAGCATTTTGACTGTGAAGATCAGCAAAAAGGACAATCCAGTTGAGAACTATAAACGGGCATACAAGATTTTTAATATTGATTCTCAACCAGTTCATGTTTGGGATTTTTCAGGCCAGACAAACCTAATATTAATGAATGAGTGGAATAGGTCAAATCATGACTGCTGCCACTCAGAGCTAGAGAATATTCTTGAAGTGCAAGTCTATGCAATGTCTGACTCCTTAACTTCCAAGATTGGTGGAACCAGCAAAGAGTATACAGAACAATCTTCTGCAGATGTTAATGATATGGATGTTGATTTGTCCTATGGAAGCTTTGGAAGATCTAGCTCGCATGGGCTAATTGGATTGGAAAATCTTGGGAATACTTGCTTTATGAACAGTTCAATTCAATGTTTGGCCCACACATCAAAGCTTGTTGATTATTTCCTAGGAGATTATGACAGGGATATAAATCGGACTAACCCACTAGGACTGAATGGGGAACTTGCTTTGGCATTTGGAGAATTATTGAGGAGATTATGGAACACCGAGAGAAAACCAGTTTCACCACATCACTTTAAGGCAAAGATTGCTTGTTTTGCCCCTCAGTTCAGTGGCTTCAATCAGCATGATTCACAGGAGCTTCTTGCTTTCTTATTGGATGGCCTCCATGAAGATCTTAACCAGGTCAAGTGCAAGCCATATGAAGAAGCTAAGGATGCAAGTGGGCGCCCTGACAAAGAAGTGGCTGATGAGTACTGGAGTAATCATTTAGCTCGAAACGACTCTGTAATAGTTGATACTTACCATGGGCAGTACAAATCTACATTAACTTGCCCTACTTGCAGTAAAACATCTGTCACTTTTGACCCATTTATGTACTTGTCTTTGCCTGTACCTTCCACGGCAAAGAGGACAATGACTGTTACAGTTTTCAGCACTGATGGTAGTATAGAGCCAATCTCATATGATGTCACTGTGCCACAATTTGGGAGTCTTAATGATCTTGTTCAGGCTTTAAGTTCTGCTTGTTCACTGGGAGATGATGAAATCCTGCTGATTACAGAGGTTTATAACAACCGCATCCTCCGATACCTCGAAGAGCCTTCAGATTCAGTTTCATTGCTGAGGGATGGAGATAAATTGGCAGCATTCCGGCTACCAAGAAAATATGAAAAATCCCCAGTTGTGGTTTTTACACACCAATATTTTGATGAGCGTTCTAGTATTGATAATATAACACCACAAATGAAGGAATTTGAGGCCCCACTGCTGGCAGTTCTTCCTGAGAGAGCCAATGGATTAACTCTGAAGAATATCTACCTGAAGTTGTTGGAACCATTAAGATTTTCCAAGAGTACTAGTTCTCTTAATGATAGTGGGAGGTGTAATAGTGGCTGTGCTGCTGTCATGATGGATGCAACGCCTGATTCAGATAGTAAGTTTCAGAGTGCTCCATCGGAAAACGCCCCTGAAAGTAGCCAGTCTGAGACTATTGAATGCCAAATGACCGAAGGACCTAGTGAGTCAAATATTGGTGACACTACTGATTCTGATCGGGAGGCACACATGGAAGAGTTTGAATTTTATTTAATAAATGGAAGGGGTGAATTCCAGCAGACGAGAATACAAACAGATGAGGTGGATTTACAGACAACACCAAACCGGCTACTTATCAATGTCCATTGGCAACAAAATGCAGTAGGACAATATGACACCTCAATGCTGAAAAGTCTACCTGAGATTCATAAGCTTGAGCTTATCCCGAAAGGAAATGAAGATTCTGTCGCACTACATGGTTGTCTGGAAGCCTTTCTAAAAGAGGAACCGTTGGGCCCAGAAGACATGTGGTACTGCCCATGCTGCAAAAAGCATCAACAAGCGATGAAGAAATTAGATCTGTGGAGGCTACCGGAAGTTCTTGTCATTCATCTCAAAAGGTTCTCGTACACCCAATTCACAAGAAATAAGCTTGAGACATTTGTGGATTTCCCCATTAGTGATTTGGATCTGTCATCATATATCATTGACAAGAGTGAACTATCAGACTGCCACTATCGCTTGTATGCTATTAGCAATCACTATGGAAATATGGGAGGTGGACACTACACCGCCAGCATCTACCATGAAGAAGGGAAGGGATGGTATAAGTTTGATGATGAGTGCGTGAGACCTATAACTGAAGACAGTATAAAGACACCTGCTGCTTATGTGCTGTTCTACAGACGAGAATGA</cdnaseq>

Protein Sequence

<aaseq>MATAATAQASASSSTASTRGSPAASSSSHSAVCLVPFRWWARVREEAPPEGGVRYAATAAASPSSYYGLRLLHSFLHPDLVLRLERGGCRGTGAGAGGRSYALVPADELSRVLARQNSSLALHNKHSFAEDSAGAYPLVLRISVRETSILTVKISKKDNPVENYKRAYKIFNIDSQPVHVWDFSGQTNLILMNEWNRSNHDCCHSELENILEVQVYAMSDSLTSKIGGTSKEYTEQSSADVNDMDVDLSYGSFGRSSSHGLIGLENLGNTCFMNSSIQCLAHTSKLVDYFLGDYDRDINRTNPLGLNGELALAFGELLRRLWNTERKPVSPHHFKAKIACFAPQFSGFNQHDSQELLAFLLDGLHEDLNQVKCKPYEEAKDASGRPDKEVADEYWSNHLARNDSVIVDTYHGQYKSTLTCPTCSKTSVTFDPFMYLSLPVPSTAKRTMTVTVFSTDGSIEPISYDVTVPQFGSLNDLVQALSSACSLGDDEILLITEVYNNRILRYLEEPSDSVSLLRDGDKLAAFRLPRKYEKSPVVVFTHQYFDERSSIDNITPQMKEFEAPLLAVLPERANGLTLKNIYLKLLEPLRFSKSTSSLNDSGRCNSGCAAVMMDATPDSDSKFQSAPSENAPESSQSETIECQMTEGPSESNIGDTTDSDREAHMEEFEFYLINGRGEFQQTRIQTDEVDLQTTPNRLLINVHWQQNAVGQYDTSMLKSLPEIHKLELIPKGNEDSVALHGCLEAFLKEEPLGPEDMWYCPCCKKHQQAMKKLDLWRLPEVLVIHLKRFSYTQFTRNKLETFVDFPISDLDLSSYIIDKSELSDCHYRLYAISNHYGNMGGGHYTASIYHEEGKGWYKFDDECVRPITEDSIKTPAAYVLFYRRE</aaseq>

Gene Sequence

<dnaseqindica>1..113#199..429#3246..3372#3459..3518#3598..3690#3803..4099#4180..4491#4587..4844#4957..5105#5200..5832#6097..6370#6466..6576#ATGGCCACCGCCGCCACCGCCCAGGCCTCCGCCTCCTCCTCCACCGCCTCCACCCGCGGCTCCCCCGCCGCCTCCTCCTCCTCCCACTCCGCCGTCTGCCTCGTCCCCTTCAGGTATATGTTACTCATCATCTTCGCTGTGTTTTGGTTGTGGTTTGGTTTTGGTTTTGGTTTTGATGGGGCAATGTGGGTTTCGCAGGTGGTGGGCGAGGGTGAGGGAGGAGGCGCCGCCGGAAGGCGGGGTGAGGTACGCGGCGACCGCGGCGGCGTCGCCCTCGTCGTACTACGGGCTTCGCTTGCTCCACAGCTTCCTCCACCCGGATCTCGTGCTTCGCCTCGAGCGCGGGGGTTGCCGCGGCACGGGTGCCGGCGCCGGGGGGCGGAGCTACGCGCTCGTGCCGGCCGACGAGCTCTCGCGTGTGCTCGCGAGGTGAGAGACTCGCTAATGGCACTTCCGTTTTCCATTTTTTTGGGCTACTCGGAGGGGGGGGGGGGGATATTGGTGGATGCTAGTGAGCGCAAAATCGAATTTAGTTCAATCATGTGGCTAAGGGGGATGATCTCCATTACTTCCGTTTTTTCATTTTTGGCTACTCGGTGAGGGGTATTGATGGATGCTAGTGAGCGCAATAGAATTTAGTTCAATCATGTGGCTAAGTGGAATGATCTGGTACATGCATTCCTGATTCCTATGGGTACATACATGACCTTTGACCTGGTTGATTCAGCATTGAGATCTAATTAGTTTCTAATGTATTGTGAGTTCCATGATTTTTTGAACTTCAATAAGCTTGAATTCTAGTTAGGGGAAGTGTATTTAGCAATCCCTGAAACTCGGGAATGCTCCATGGCTTGGTATGTGACCTCGAAAGGATGAATTCAGCATTTCAAGCTAGATTAGTGCCTCGTTTGTAACGTGAGGGTGGCAATCATCTATCCATACTAGAGCCACAACGTGATGCTGAGGGCAGGGCTTGTAGGTTGTACCAGACCATTTGCTAGGTGGTGAACTTGTTTCTTGCATTGCTTGATGGTTAAATATGTTGTCCCCTTTCAGTCTAGACACATATGTTTTAGCCCATTTTAGCTCTATGCCTTTGCTATAGATTCTTTCCTCCAACTTTTGAACCTCTAACATAGCAATACTGGCAATTTGGCATGGACAGTTGCAAACGCAACGGACTTTTAAAACTGTAGCGTTTCATGCAGCTTCACTTCTGATTTGTGGGAAGCCAGGATAAATTACTCTTAAAGAAATTTCTCTATAAGCTGAAGTTCTCAACATAATATAATTGCATGTAAAATAAATAAAACTGTAAGTCATGATATAGTTACATACTTACATTTCATGCAGGGCTATGCTAACATTGTTCGCATCTCCATGTTGCGCAAACTTGGAGGGTGCAGTTAGGATTTTTTTTTTGTTTGGCTTTCTTAGGAAGCAAATCAAACCTGTCTCAAAATGATTGCTTTTAATAATGCATAAATTTTGCATTCATTATCTAGTGAGAGTTTAGTGTCTCAACAGCAATGCTGATGGGTTCATCTTCCTTTCTGCACTTAAGTTTGTGCTGTGTTTTCTTACTTGAATTATTGCTTTCCAAAGTAAGGTTTCTGCAATATGCTTGTCAATAAAATCATGCATGCATATGATGTGTGTTGCTCTGTTCTGCATCTTTTTGCAAATAGGATTTACTGAGTGAGCACATACCAAGTGTTGAGGCTCAACTGTTTAGTCCAGTAGACCCCATTGGTTGATAGGTGCAATTTTTTATAAATACATTTTTGTTTCTTGACAAAAGACGATAATAAATACACATGTGCACATTTTTGACTTTCGTGGAAAATATAGGGCCTTCTGGTCTGTAGGATTTATTCAATTATTGAGAGGGAAAGCAATTCAATATGGGTTCCCTTTAATCCTAGGCTGGCCCTGCTTTTATGACAGGGGCTTTTGTTGGGTTTGATTTTATAGATTATTTTGGTATCACAGAAGCATCCATGAATATCATCTCATGTTTTGCATTTTGGTAACCTAGACTTTCATTTTAGAAAACAATGTGCAACCTAGCCACTATTTATCTCTCTTCTCACTATGTTGAGTAGCAAGTTTTGGTCAAACAGTAAGCATAATCATCAATTCTAATTGTGATTGAAATTATTCGTCTATGTTCAGTTAGTAATACCCCTATATGTGAGACATGAGTAGGATTATATTCTGAACCTCCATATTCTTGCACCTTTAATCCAGCTTCTTAGGCTATAGCTCTCCCTGAAACGAGTTTCTTGGGACCCTAATTTTAATCTTCAGGAGTTCTATTTGGTTTTAAATATTCCTTACAAGTAACGAAGAAGAAGACTTGGTAACGAAGGTAAACTTGTTTTGCTGAAGTTAGGCTAGAAAATGTTTCATATAGAATAATATAAACTTTCTATTGTTACATGCGATTCCTATTTCCTCTCAAGTCTGGACTTATATTTCAATAACAAAGAATCTGCAGTCTAGAGGATTGATGATTAATTGAATAGGATAACTAGAAAGAAGCTGCTGTTCTATATATTATCGTTTTCTCTGTCGCTGGCAAGTACCTAAATGTATTCTCAGTAGATCCCAATGTTAGCTAAATATGACATTATTTTCTTGGTATATTTTAATACCATTCAAGCTCCACTTTGTCACTATGTTTACCATTATGCCTGTCTTTGTTATACTATTGTGCATTTTGAGCACTTTTGGACAATATACTTTTGGACCATGTGGTGATATCTGTGTGCTGATAGCATCCTCTCCTTGCTTAGCACATTTCATCAATGTGCTCAGTTCTTGCCTTCCACCAATCACAGCAGATTACATCTTCCTTTTCAGCTCAGCTCTCAGCTGTTCACTGCAGCGTGCACTTAGCTTTCCGGCCTCACCATATTTCCTGTGCATGTGCACGTGCTGCTTGCAGCATGAGGTGTGGTCAGCACTCACACTTACATGAGTAGCTCTTTCCTTGTCTGGGTCAGCTAAGCCAAGTGAGAGAGAGCAGAGGATTAATTTTCAGTTCTAGGAATATATATATTCTGCAGTGCTGTAATGTCGTCCAATTGTTTTGTACCTTGATGCCAAAGATGTTTCTTCAGAATATCAATTTTCATGAAATCTTGTCTGTGTTATTTTTTTATTTGCCTAATAGGTTCAATTTACAGCTTCCATCTTGCCGCATCTATTTCTGCTGACTTTATTTCTGTTTTCTTCTCCAGGCAAAATTCTAGTTTGGCATTGCATAATAAACATTCATTTGCTGAGGATAGTGCTGGTGCGTACCCTTTGGTGCTTAGGATATCTGTTCGAGAAACAAGCATTTTGACTGTGAAGATCAGCAAAAAGGTAATGCTATCCTATTTGACAGATGATATATGGCTCTATCAAATTTTTTTCTCATGCCCATCCTTACAATTTCTATTCTATTTCAGGACAATCCAGTTGAGAACTATAAACGGGCATACAAGATTTTTAATATTGATTCTCAACCAGTATGTCGCTGTTTGTCTGCATTTCAAGTTCAGCAATATACTCCCACTTGTTCAGTTTACTTAATGTTTCTTTATCCAGGTTCATGTTTGGGATTTTTCAGGCCAGACAAACCTAATATTAATGAATGAGTGGAATAGGTCAAATCATGACTGCTGCCACTCAGAGCTAGAGGTATTATCAGTTGATACTCCCCTGCTTGATACCCTTGTTTTTCTGTTTCAGAATCAGGCATAAAATTTCCTTCCTAGATCCATATTCTTATCATTTTTTTTGGCATGTGCAGAATATTCTTGAAGTGCAAGTCTATGCAATGTCTGACTCCTTAACTTCCAAGATTGGTGGAACCAGCAAAGAGTATACAGAACAATCTTCTGCAGATGTTAATGATATGGATGTTGATTTGTCCTATGGAAGCTTTGGAAGATCTAGCTCGCATGGGCTAATTGGATTGGAAAATCTTGGGAATACTTGCTTTATGAACAGTTCAATTCAATGTTTGGCCCACACATCAAAGCTTGTTGATTATTTCCTAGGAGATTATGACAGGGATATAAATCGGACTAACCCACTAGGACTGAATGTATGTATAGTTTGTCATGAGTTTACTGTTTGTTTCCTTTGAATATATCGGCTAAATTCACTGATGTTTTCATTACTTAGGGGGAACTTGCTTTGGCATTTGGAGAATTATTGAGGAGATTATGGAACACCGAGAGAAAACCAGTTTCACCACATCACTTTAAGGCAAAGATTGCTTGTTTTGCCCCTCAGTTCAGTGGCTTCAATCAGCATGATTCACAGGAGCTTCTTGCTTTCTTATTGGATGGCCTCCATGAAGATCTTAACCAGGTCAAGTGCAAGCCATATGAAGAAGCTAAGGATGCAAGTGGGCGCCCTGACAAAGAAGTGGCTGATGAGTACTGGAGTAATCATTTAGCTCGAAACGACTCTGTAATAGTTGATACTTACCATGTAAGTTCTTTAAATTTTTCATGTGTTAAAGCAATTACACTATTATTTTCTCCTGCTTCTCCTGCCATTGACCCTTTTCTGACATCTACTTGCAGGGGCAGTACAAATCTACATTAACTTGCCCTACTTGCAGTAAAACATCTGTCACTTTTGACCCATTTATGTACTTGTCTTTGCCTGTACCTTCCACGGCAAAGAGGACAATGACTGTTACAGTTTTCAGCACTGATGGTAGTATAGAGCCAATCTCATATGATGTCACTGTGCCACAATTTGGGAGTCTTAATGATCTTGTTCAGGCTTTAAGTTCTGCTTGTTCACTGGGAGATGATGAAATCCTGCTGATTACAGAGGTATGCTTTTATCTCCATTGAGCTTTGGCCCTTTTGCGTTTTTGCCACTTTCTATCTCAGGTTAAACAGTATGAGTCATATTAGGCCTTTTACTTACTGGAAGTGACTACAGGTTTATAACAACCGCATCCTCCGATACCTCGAAGAGCCTTCAGATTCAGTTTCATTGCTGAGGGATGGAGATAAATTGGCAGCATTCCGGCTACCAAGAAAATATGAAAAATCCCCAGTTGTGGTTTTTACACACCAATATTTTGATGAGTAAGCACAATCAGATATATTTGTTGCTAGATTTTTATTTGACTTAGGTATTTTAGTAGAACTAATAATACGCTTTTGGTACCTCTGAATCCAGGCGTTCTAGTATTGATAATATAACACCACAAATGAAGGAATTTGAGGCCCCACTGCTGGCAGTTCTTCCTGAGAGAGCCAATGGATTAACTCTGAAGAATATCTACCTGAAGTTGTTGGAACCATTAAGATTTTCCAAGAGTACTAGTTCTCTTAATGATAGTGGGAGGTGTAATAGTGGCTGTGCTGCTGTCATGATGGATGCAACGCCTGATTCAGATAGTAAGTTTCAGAGTGCTCCATCGGAAAACGCCCCTGAAAGTAGCCAGTCTGAGACTATTGAATGCCAAATGACCGAAGGACCTAGTGAGTCAAATATTGGTGACACTACTGATTCTGATCGGGAGGCACACATGGAAGAGTTTGAATTTTATTTAATAAATGGAAGGGGTGAATTCCAGCAGACGAGAATACAAACAGATGAGGTGGATTTACAGACAACACCAAACCGGCTACTTATCAATGTCCATTGGCAACAAAATGCAGTAGGACAATATGACACCTCAATGCTGAAAAGTCTACCTGAGATTCATAAGCTTGAGCTTATCCCGAAAGGAAATGAAGATTCTGTCGCACTACATGGTTGTCTGGAAGCCTTTCTAAAAGAGGAACCGTTGGGCCCAGAAGACATGTGGTGAGTCATGAGTGCCCCCCCTGAGGAACAACTGTTATGCTTTTGGCTTCACTGCTTATTGAATAGCCTTCTTTGCAATCTTCATTTCTTTTGTTAACCAAAATAGGTTGATGTGCGTATGTATGAAGCTGAAATAGATTGATTACCTTTGCAAAATATTACCTCAATACATGGCTAGCTTGCTTTGGATTCTGAATTGGAAGTGTACTGTTGTACTGTTGTTGCATTACTGATACCCACTTTTTTTCTCTGCTTTGCATTCAGGTACTGCCCATGCTGCAAAAAGCATCAACAAGCGATGAAGAAATTAGATCTGTGGAGGCTACCGGAAGTTCTTGTCATTCATCTCAAAAGGTTCTCGTACACCCAATTCACAAGAAATAAGCTTGAGACATTTGTGGATTTCCCCATTAGTGATTTGGATCTGTCATCATATATCATTGACAAGAGTGAACTATCAGACTGCCACTATCGCTTGTATGCTATTAGCAATCACTATGGAAATATGGGAGGTGGACACTACACCGCCAGCATCTACGTGAGTTTCCTCTTTCATGTATTCTCATTACACCCAGCCTTTAAACCATCTTTTTCAATGTCTTGATAACGAGCAAGGCTGGTTGGTTTCTGCAGCATGAAGAAGGGAAGGGATGGTATAAGTTTGATGATGAGTGCGTGAGACCTATAACTGAAGACAGTATAAAGACACCTGCTGCTTATGTGCTGTTCTACAGACGAGAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025185