BGIOSGA025225

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Revision as of 06:25, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA025225| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA025225, complete gene.| tag = P0496D0...")
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Gene Name

BGIOSGA025225

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025225, complete gene.

LocusTag

P0496D04.16

Ensembl Transcript ID

BGIOSGA025225-TA

Ensembl Protein ID

BGIOSGA025225-PA

Length

5211

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:3661600..3666810

Sequence Coding Region

3661600..3662001,3663039..3663164,3663245..3663318,3663403..3663472,3663556..3663611
,3663703..3663774,3663842..3663936,3664092..3664155,3664236..3664365
,3664451..3664666,3664754..3664875,3665652..3665826,3665913..3666003
,3666165..3666322,3666455..3666643,3666751..3666810

Genome Context

<gbrowseImage1> name=IndicaChromosome07:3661600..3666810 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:3661600..3666810 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCAGAGCTGCGAAGCAGTACTCGCCAAGCACGTCTGAGGTCTAGGAAGCCTGACGACCAGAAGCCAGCGGAACAGGCTGCGAAACCAGCGTTGCCTGCTCCACAGAGAGCAGGAAAGCGTGTTCCTCCCCCTGCTATCAGGGGCAGAAAGGGTGCTGCTGGGAGAAGAGGGGGAGCAGCACCAAGGGGTAGAAGAAAGGCGGTTGAGGTTGTTGATTTGGAGGCTGGCCAGGGTCGTGGAGATTCCCCTAAACCTGTTGTTGGACAGGCAGTTGTTGGTGAAGCAAAGAACGTTAAGGCACCTGAGGTTGTCGCCAATAAGGGTTTGCGAATGGATGGGGAAAGCGCAGAGAAGCTTGTTGCGGCTGACGATGAATCATCACTACCTGTCCCTGAGAGGATTCAAGTAGGTAATTCTCCAGAATATATAACTGACAGGAAATTAGGTAAAGGTGGTTTTGGTCAAGTTTATGTTGGTAGAAGGGTATCTGGTGGAACTAATCGTACTGGTCCTGATGCATATGAGGTTGCATTGAAGCTTGAGCATCGAAACAGTAAAGGGTGCAATTATGGTGCCCCCTATGAGTGGCAAGTTTACCATAATCTTAATGGCTGCTATGGCATACCAGCTGTCCACTACAAGGGTCGTCAGGGCGACTACTATATTCTTGTCATGGATATGCTTGGTCCCAGCCTTTGGGATGTGTGGAATTCATTAGGGCAGACGATGTCTCCACATATGGGTGCTTGCATTGCTGTAGAGGCCATTTCAATTCTTGAGAAGCTCCATTCTAAAGGGTTTGTGCATGGTGATGTGAAACCAGAGAACTTTCTGCTTGGCCAGCCTGGATCACCTGACGAGAAGAAGCTTTATCTTATTGATCTTGGTTTAGCATCGAAATGGAGGGAGTCATCAGGGCAACATGTTGATTATGACCAAAGGCCTGATATCTTTAGGGGTACAATTAGATATGCCAGTGTCCATGCCCATTTAGGCCGTACTGGTAGTAGGAGGGATGATTTAGAGTCATTGGCGTACACCCTTATATTTCTAATAAGAGGAAGATTGCCTTGGCAAGGTTACCAGGGTGATACCAAGAGTTTCCTTGTTTGCAAGAAGAAAATGGCTACTTCTCCGGAGATGCTAAGCTGTTTCTGTCCACCTCCATTCAAACAGTTTCTTGAAGTTGTCACAAATATGAAATTTGATGAAGAGCCAAATTACGCCAAACTGATTTCTCTCTTTGATAGTTTGATTGAGGTACCTGCCTCAAGACCTATCAGAATTGATGGCGCTCTTAAGGTTGGGCAGAAACGTGGAAGAAACCATGAAGAAGATGAGCAACCCAAGAAGAAAGTTAGATTAGGTAGCCCAGCAGCTCAATGGATTTCTGTTTATAACGCCAGGCGGGCCATGAAGCAAAGGTACCACTATAACGTGGCTGACAACAGGCTTCAGCAGCATATAGAGAAGGGTAATGAAGATGGTCTATACATTAGTTGTGTGGCGTCTTCAGCAAATCTTTGGGCCCTCATAATGGATGCAGGAACTGGTTTCCTTTCTCAAGTTCATGAGCTCTCACCAGTTTTTCTGCATAAGGACTGGATAATGGATCAGTGGGAGAAGAATTTCTACATAACAGCAATAGCTGGATCAGCTAACGGAAGTTCTTTAGTTGTGATGTCCAAAGGAACACCTTACTCCCAACAGTCATACAAGGTTAGTGAGTCATTCCCCTTCAAGTGGATCAATAAAAAGTGGAAAGAAGGTTTTCATGTGACATCTATGGCCACCGCTGGAAATCGCTGGGGTGTAGTTATGTCAAGGAACTCAGGTTACTCTGAACAGGTTGTAGAATTGGATTTCCTATATCCAAGTGAAGGCATCCATCGGCGATGGGAGACTGGTTACAGAATAACCTCAATAGCAGCAACAAATGACCAGGCTGCTTTTATCTTGAGCATACCGAAACGGAAGCCAGTAGACGAGACACAAGAAACTCTCCGGACCTCTGCCTTCCCCAGTAATCATGTCAAGGATAAATGGGCGAAAAATCTGTACATAGCATCGATCTGCTTCGGGCGAACCGTCTGTTGA</cdnaseq>

Protein Sequence

<aaseq>MPELRSSTRQARLRSRKPDDQKPAEQAAKPALPAPQRAGKRVPPPAIRGRKGAAGRRGGAAPRGRRKAVEVVDLEAGQGRGDSPKPVVGQAVVGEAKNVKAPEVVANKGLRMDGESAEKLVAADDESSLPVPERIQVGNSPEYITDRKLGKGGFGQVYVGRRVSGGTNRTGPDAYEVALKLEHRNSKGCNYGAPYEWQVYHNLNGCYGIPAVHYKGRQGDYYILVMDMLGPSLWDVWNSLGQTMSPHMGACIAVEAISILEKLHSKGFVHGDVKPENFLLGQPGSPDEKKLYLIDLGLASKWRESSGQHVDYDQRPDIFRGTIRYASVHAHLGRTGSRRDDLESLAYTLIFLIRGRLPWQGYQGDTKSFLVCKKKMATSPEMLSCFCPPPFKQFLEVVTNMKFDEEPNYAKLISLFDSLIEVPASRPIRIDGALKVGQKRGRNHEEDEQPKKKVRLGSPAAQWISVYNARRAMKQRYHYNVADNRLQQHIEKGNEDGLYISCVASSANLWALIMDAGTGFLSQVHELSPVFLHKDWIMDQWEKNFYITAIAGSANGSSLVVMSKGTPYSQQSYKVSESFPFKWINKKWKEGFHVTSMATAGNRWGVVMSRNSGYSEQVVELDFLYPSEGIHRRWETGYRITSIAATNDQAAFILSIPKRKPVDETQETLRTSAFPSNHVKDKWAKNLYIASICFGRTVC</aaseq>

Gene Sequence

<dnaseqindica>1..402#1440..1565#1646..1719#1804..1873#1957..2012#2104..2175#2243..2337#2493..2556#2637..2766#2852..3067#3155..3276#4053..4227#4314..4404#4566..4723#4856..5044#5152..5211#ATGCCAGAGCTGCGAAGCAGTACTCGCCAAGCACGTCTGAGGTCTAGGAAGCCTGACGACCAGAAGCCAGCGGAACAGGCTGCGAAACCAGCGTTGCCTGCTCCACAGAGAGCAGGAAAGCGTGTTCCTCCCCCTGCTATCAGGGGCAGAAAGGGTGCTGCTGGGAGAAGAGGGGGAGCAGCACCAAGGGGTAGAAGAAAGGCGGTTGAGGTTGTTGATTTGGAGGCTGGCCAGGGTCGTGGAGATTCCCCTAAACCTGTTGTTGGACAGGCAGTTGTTGGTGAAGCAAAGAACGTTAAGGCACCTGAGGTTGTCGCCAATAAGGGTTTGCGAATGGATGGGGAAAGCGCAGAGAAGCTTGTTGCGGCTGACGATGAATCATCACTACCTGTCCCTGAGAGGGTATGAGTAATGACATCTCTCCAGTATTTCTTAAAATCTCTTCACGAATTGCCAGTTCCATTTACATTTGTTAGCTCTTGATAGGTTTTGAAGTTCATTCAATTAAATCAAATCCATTGCTTGTAGCCTTCTCCTTGCATTTGTACTCTCAGTATTCCATTTTGTTCTAGATTTAGCCCAAACATATGGAACTTTAATACTTGTCTATTCTGTACAGAATAAACACAGGCTTGTCACACTTATCTTTAAAGCACATAAAAGATTAAAAAGTATGTCGAATGTCGAGGCTCTCCATCTCACCTGCAGTCCTGCACTTCACCCATTGTTTCCTTTTCTTCACTATTCATGACGCTGACGCATTTTGGGCTCATTTATCAATGTAGACTTTGGGCAAGTTTGGAATTGCTCTAGTTTGCTGTGCAACCTAGTAGATACAGCCTTACATGGACTTTTGCAAAACTTTTGTAATGCATTACTCTTGTGGCTCTTAAGGAAAATTATATCAATTAGTTGATATGGCACACAGTAGTAAAATAGAATTGCCTCAATAACACTTCTGATGACAGGCACTTCCTACAGTGCTGGTTAGAGGCTGGCCAGAGTAGATTGCTTGCACTGGAATATCTGACTTTTTTCCAAAAGATGCATAAAAGTAACCCCATGTAGGTCCTGGCAATATCCCTTGAACAGGATCATCATGTCCTGTCCAATCTGGCTCACAAGCCCAGTAGATTGTCATGGAAAAGGTTATTACATATTCAAGCTTGAGTATGGTTGCACAGGACCTGAAAACTGAAAGTAGATAAGAGTTGATTTATTCCCCTCTCATGGTCTCACCTCCCAAGTTTGATTATTGTGCCTTTAATAATTTATTTTTAATGATAAAGCAACTCCATTGGTCCCCCCCTTAGCTTTTGCATAAAGTCACATAGCTGGAAAAATTCTTCTCTAAGATGGTGTGATATTGGACCTTTACGTAATAGATCTTATTTTTGTCATGCTTCTAGGAAGCATCTAATGTTTTGTCATTGCTGCAGATTCAAGTAGGTAATTCTCCAGAATATATAACTGACAGGAAATTAGGTAAAGGTGGTTTTGGTCAAGTTTATGTTGGTAGAAGGGTATCTGGTGGAACTAATCGTACTGGTCCTGATGCATATGAGGTTTGCTCTCTAAATAGAATATATTTTGCTGTAAATATATCCTTTTCACATTAATACAATCTAAAAATGACCCTATGTAGGTTGCATTGAAGCTTGAGCATCGAAACAGTAAAGGGTGCAATTATGGTGCCCCCTATGAGTGGCAAGTTTACCAGTATGTACTTAATACAGTCATCTTTCATTTGTACCAGATTATTCTCTGCTCTTTGAGTTTACTGATTATTACCTTTCCTACTAGTAATCTTAATGGCTGCTATGGCATACCAGCTGTCCACTACAAGGGTCGTCAGGGCGACTACTATATTCTTGTGAGTTTACTGAAGTTAATAACCATTCTATGCTGCCATGGAGCTCAACGTATCTTGACTTAATCTTAATTAAAATTTTCCAGGTCATGGATATGCTTGGTCCCAGCCTTTGGGATGTGTGGAATTCATTAGGGCAGACGTAAGCACCTAGATTTATCCCATTCATTGCTGTTGCCTCGTGTTCCTCATCATTTGTGTTTATGTATTAAAAGTAATAACATCATTAACAGGATGTCTCCACATATGGGTGCTTGCATTGCTGTAGAGGCCATTTCAATTCTTGAGAAGCTCCATTCTAAAGGGTAACTTATTATCTTTGTTCTTTATCAGGTTATCCTTAGATGCACCATTCTTAATTTATGTTTGTAGGTTTGTGCATGGTGATGTGAAACCAGAGAACTTTCTGCTTGGCCAGCCTGGATCACCTGACGAGAAGAAGCTTTATCTTATTGATCTTGGTTTAGGTAAGCTATTAATAGTTTGTTTCATTTCACCACATTTTCATGGCATACACTAGGACTAAAATCTTATGCTTTATACACTTGTATTTCCAATTGTTGTTGCCCCTATTAGTTTTCAAGTATTTTTTGTATGATATGGCATTGTCCAAATTGTACAGCATCGAAATGGAGGGAGTCATCAGGGCAACATGTTGATTATGACCAAAGGCCTGATATCTTTAGGTTGGCAATATTCTCTCTGTACCTGCTATCTGTCTCTCATATAGTGCTTTTTACTTATTTTTATCTTCGTTTTTTTTCAGGGGTACAATTAGATATGCCAGTGTCCATGCCCATTTAGGCCGTACTGGTAGTAGGAGGGATGATTTAGAGTCATTGGCGTACACCCTTATATTTCTAATAAGAGGAAGATTGCCTTGGCAAGGTTACCAGGTATATTTTAATATGCCTATTAACTTCATGATACCAACTTCAGTTCAGATTAGCCAATTCTAATGTTGCTTGCTTAATTATGCAGGGTGATACCAAGAGTTTCCTTGTTTGCAAGAAGAAAATGGCTACTTCTCCGGAGATGCTAAGCTGTTTCTGTCCACCTCCATTCAAACAGTTTCTTGAAGTTGTCACAAATATGAAATTTGATGAAGAGCCAAATTACGCCAAACTGATTTCTCTCTTTGATAGTTTGATTGAGGTACCTGCCTCAAGACCTATCAGAATTGATGGCGCTCTTAAGGTCTGTACCACCCACCATTTTACTCACTTCCATATTTTGTTTAGGTCTGCTCCATATCTGTCCATGAACCCTTCTCTTAAATTATAGGTTGGGCAGAAACGTGGAAGAAACCATGAAGAAGATGAGCAACCCAAGAAGAAAGTTAGATTAGGTAGCCCAGCAGCTCAATGGATTTCTGTTTATAACGCCAGGCGGGCCATGAAGCAAAGGTAATTACATCAAAGAACTAGATGATATAAAGCATGATCGACCTGCATTTGTTTAGTCTAGGTACTTGCTTTTCTTGGATGCAAACAATAGTAATTTGAAAACACAAGTTACTGCCTTGTCTGTGATAAATTAAATATTTCATTTAATTTTTTTTGAATTGTCAAATCAAACTCGACATTTTCTTAAAAAGACAGTTTTGGGTACCTGACAGACCATTTAATTTTAATTCAAGATAATAATCCATTGCACATTGTTCATGTTAAATTTGGATCACATGTCATGTTACTCCTGCTCCATGAGTCCAGACAAACTACTTTTTAAACATGCACCGTTTCAGGCCCAATACAGATGATCTTGATTGCTACTAACTATTTATTAATTGTCACATCTGAATTTTGATAGCCCAAAACCTAGCATGATACATTTAACTCTGGTGCGCTGATTAGAACATTCTAAAAGTGACCTGAGTCCTGGAATCATTTGAGTGCAGCATATATAGTTGTAAATCTAAAAAGCTAAATAACTCTTCACTAACTAGACAGCACGTGCCTGATATTAATACAGCTTGTAAGTGCTAGTGATCATGGGTTTTAGTTTGCGCTTGTTTCTTTTTTCTTTCAAAATTTACAATGTCATCTTGTTGTGATTCTCTGTGCATGCCTTTCTCTTGAACAGGTCTTGAAATTTGGTTGATGAATCATTATCACTCTTTTATGGTGTGACAATATTGTTGCTACAAGGAAATTAATACCAAGTTATGCTACTTCTTTGTTAGGTACCACTATAACGTGGCTGACAACAGGCTTCAGCAGCATATAGAGAAGGGTAATGAAGATGGTCTATACATTAGTTGTGTGGCGTCTTCAGCAAATCTTTGGGCCCTCATAATGGATGCAGGAACTGGTTTCCTTTCTCAAGTTCATGAGCTCTCACCAGTTTTTCTGCATAAGGTAAAGTACAATCTGTTGAGGTGTGATAATTAGTACTTGGATTATTTGTTTGCTGAGAGTCCTAACTCTGTTTCAATTATACATAGGACTGGATAATGGATCAGTGGGAGAAGAATTTCTACATAACAGCAATAGCTGGATCAGCTAACGGAAGTTCTTTAGTTGTGATGTCCAAAGGTCTGGGATGTGTTTCTTATTAGTCATTTTATATCCCGACCATTCTTCTTTGACGATGAATTATCCATATGTTTCATATGGACTTAATCATTTTGTTGCTCCCCATGAGTTAACCTGGCTTAGTTGTGATCACCTATAGTTTGATATGTCCATTATTGCAGGAACACCTTACTCCCAACAGTCATACAAGGTTAGTGAGTCATTCCCCTTCAAGTGGATCAATAAAAAGTGGAAAGAAGGTTTTCATGTGACATCTATGGCCACCGCTGGAAATCGCTGGGGTGTAGTTATGTCAAGGAACTCAGGTTACTCTGAACAGGTTAGAATAATTGCTTGACCTAGTTCATATTCAGTCCACAAATTTGGCAATTTATATTCCTGTGAGCATTCCATTATTTACTGTAGAATATATCTACTTATGAAGCTAACCTTTTTCTCATGCCCTTTTTAGGTTGTAGAATTGGATTTCCTATATCCAAGTGAAGGCATCCATCGGCGATGGGAGACTGGTTACAGAATAACCTCAATAGCAGCAACAAATGACCAGGCTGCTTTTATCTTGAGCATACCGAAACGGAAGCCAGTAGACGAGACACAAGAAACTCTCCGGACCTCTGCCTTCCCCAGTAATCATGTCAAGGTATATACATTATCGCAGCTCATTGAAATCCGGCCGTGTCTTGTAAAAAACAAACATAATTTCTCGCGTTTCGGAGTTCAGTAACATAGCCGGTGTGCTGTTCGCAGGATAAATGGGCGAAAAATCTGTACATAGCATCGATCTGCTTCGGGCGAACCGTCTGTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025225

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA025225&oldid=50819"