BGIOSGA025354

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Revision as of 06:27, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA025354| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA025354, complete gene.| tag = P0431A0...")
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Gene Name

BGIOSGA025354

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025354, complete gene.

LocusTag

P0431A02.7

Ensembl Transcript ID

BGIOSGA025354-TA

Ensembl Protein ID

BGIOSGA025354-PA

Length

4058

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:5554388..5558445

Sequence Coding Region

5554388..5554695,5554953..5555116,5555483..5555688,5557148..5557402,5557492..5557578
,5558019..5558191,5558337..5558445

Genome Context

<gbrowseImage1> name=IndicaChromosome07:5554388..5558445 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:5554388..5558445 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTCCTCCGCTCCCTCCTCCGCCGCGCCGCCGTCGCCGCCACCGCCACGGCGGCCGGCGGCGGCGTTGGTGTGGGCGCCCGCGCCACGACGGGCCGAGCCGATCCGCCCGCGGCGCTGGCGTCCCTCCTCGTCGCGTCCAGGTCGTACGCGAAGGCCAAGGGCGGGGGGAAGCCGGCGGGGGCCACGTCGAACCGCGGCAAGGTCCGCGCCAAGGACCCCCGCGGCGTGGCGTCCGAGGAGGGCGCGGCGGGGGAGTTCGAGGGCGGCGGCGGCGGAGCGGGAGGCGGCGACGACCTTGATGTGGACTTGGATGAATGGAAAGCTATGTTACCAGAGGGATTGCCAGCCGGCATGATGAAGGAGTTTCAGGAGACAAGACGGTGTGCTGTGATGGTGAGAGAGAGCTTCCTAGACCTACGGGATAACTTCCGAAGAATTGTTGATCCAGCTATTGCTGCCAAACGAAAAGATGCCAAAAGACAAATTGTATTAGATGGTCCCCGGAGCTGCGGTAAAAGCATTGCACTTGCAATGCTTGTCCACTGGGCACGTACTGAAGGATGGCTAGTATTTTATGTTCCACAAGGGAAGGATTGGTCACATGGAGGATTCTTCTATAGAAACACCTACAATGATCTCTTTGATACTCCAATACAGGCTGCAAAGATCTTACAGGATTTCTTGAAGTACAATGAAAACCGCTTGCAGCAGTTACCATGTCAAATATTTGAGCCTATTCCCTTGGGGGAAGGTGCTGGTGTTGGAATGATGAAGGGGGCTGACACAGTGGAAATGCCTGAAGGTTCGACACTGTATGATCTCATTCAAACTGGGATAACACATTCGCATGCTTCAGTTGGTGTTGTAGTTCGTTTAAGGAAGGAATTGTCACTTGTGAAAGATGTTCCCGTATTATTTGCAATTGATCAGTATAATAGTTGGTTTACATTCAGTGAGTTCCAGGAACCGGTGACTGTTAGATCATGTCGGCCAATTCATGCAAAAGAGCTTACAATGGTCAATGCTTATAGGCCAATGCTACACAATGATATGATGGTAGGAGCATTTTCACATTCAACTGCAGTTGGAAAATTACGACAGGACCTCCCAGATGTTCCATCAGATGCTCGTGTGATGTTTCCGCGGTACACTGTAAATGAAGCTGAGACTGTCTGCCACTATTATATGAGGCAAAAGATCATCAAGCGCGAAAATTTTTCAGAAGAGAAGTGGAAAAAGATTTATTATTTGTCAAATGGAAATGGCTCAGAGATGAGATGGCTTGCTGCCTTTATCTGA</cdnaseq>

Protein Sequence

<aaseq>MLLRSLLRRAAVAATATAAGGGVGVGARATTGRADPPAALASLLVASRSYAKAKGGGKPAGATSNRGKVRAKDPRGVASEEGAAGEFEGGGGGAGGGDDLDVDLDEWKAMLPEGLPAGMMKEFQETRRCAVMVRESFLDLRDNFRRIVDPAIAAKRKDAKRQIVLDGPRSCGKSIALAMLVHWARTEGWLVFYVPQGKDWSHGGFFYRNTYNDLFDTPIQAAKILQDFLKYNENRLQQLPCQIFEPIPLGEGAGVGMMKGADTVEMPEGSTLYDLIQTGITHSHASVGVVVRLRKELSLVKDVPVLFAIDQYNSWFTFSEFQEPVTVRSCRPIHAKELTMVNAYRPMLHNDMMVGAFSHSTAVGKLRQDLPDVPSDARVMFPRYTVNEAETVCHYYMRQKIIKRENFSEEKWKKIYYLSNGNGSEMRWLAAFI</aaseq>

Gene Sequence

<dnaseqindica>1..308#566..729#1096..1301#2761..3015#3105..3191#3632..3804#3950..4058#ATGCTCCTCCGCTCCCTCCTCCGCCGCGCCGCCGTCGCCGCCACCGCCACGGCGGCCGGCGGCGGCGTTGGTGTGGGCGCCCGCGCCACGACGGGCCGAGCCGATCCGCCCGCGGCGCTGGCGTCCCTCCTCGTCGCGTCCAGGTCGTACGCGAAGGCCAAGGGCGGGGGGAAGCCGGCGGGGGCCACGTCGAACCGCGGCAAGGTCCGCGCCAAGGACCCCCGCGGCGTGGCGTCCGAGGAGGGCGCGGCGGGGGAGTTCGAGGGCGGCGGCGGCGGAGCGGGAGGCGGCGACGACCTTGATGTGGAGTTCGAGCTGCCCACTGACCCGCTGCCCCCGACCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCTGCAATATTTGTTGTATCTCTTATATTATTATATCACAATTGATTCGTAGAGATAAGCAAGTCGGTACCATAGGCTGTAATGAATAAGCTAAAAATAGTTTCTGTTTCAGACTTAAGATTTCTTTGGGTATTAATTCTTTTATTTTCTGGCATGTGGCCTTTTTTCAGCTTGGATGAATGGAAAGCTATGTTACCAGAGGGATTGCCAGCCGGCATGATGAAGGAGTTTCAGGAGACAAGACGGTGTGCTGTGATGGTGAGAGAGAGCTTCCTAGACCTACGGGATAACTTCCGAAGAATTGTTGATCCAGCTATTGCTGCCAAACGAAAAGGTGTTTTGATACTTTTGCATGATTTTGTTTCAGTTGTTAAGATTGTACCTGACGAATTTGATCTTCATAGATCATTTTTATGTCATTTTACAAATAGTATGCACAACGCTTGTATGATCTACCTTGCATACCTCTTTGGGTGTTTCTGAGATTTGCATGGTTAGTACCTGTTTAGTCCAGAATAAAAACTATTTTATTGGCATGTTTTGAATTTCTCTTAAGTTGAGTGCATTTTCCTTGTCTAAGTAGTATACATATCTGATATAAAATACTATCTGGTTTACGCATATATTGTGGTACCATTACATTCAGAATATTGGTTTATGAACAACTCTCAGCCATGTTTCCTGCTTTAAATGTCTTCAGATGCCAAAAGACAAATTGTATTAGATGGTCCCCGGAGCTGCGGTAAAAGCATTGCACTTGCAATGCTTGTCCACTGGGCACGTACTGAAGGATGGCTAGTATTTTATGTTCCACAAGGGAAGGATTGGTCACATGGAGGATTCTTCTATAGAAACACCTACAATGATCTCTTTGATACTCCAATACAGGCTGCAAAGATCTTACAGGTGCTAACCTCTATGTGATGTCCTCATCCATTCCCCCCTTGCTATTTATGGATCATGGATGTGAATACAACACATTACGACTATTTTCCGCAAAATTTTTAATTAGTTAATTCGTATATTTTTCCCTAAACTTGTCAAGTTTTTGCTAGTTTAGTTTCCTTGACTATAAGTATTGTTTTGATTGCATGGTTCACGATTAATTTTCGTACACCAACTGTTTTCTATGGTCAAGTCTTTTGTTTCACATCCAATCTTGTTTTTTATTCCATAATTTGTTTCTGGTAGAGTGGTGGTGTCCTTCCTCTGCATTTTAATTTCCCTATGATTTCATAAAGTGGGTCAACAAGATGCAAAATCTAAGGGTAACATAAGATTGTTTTGCACAATTTGTTTGCAGTTCAATGTTAACATAAGATTATTTGCACAATATATTTGCAATTCAATGTTTATTTACTACGTGTTGTGAAATTATTATGTGGTTGCTGTTATCATCAATTAATATTGTTCAGCAGATTGGTTATCTCAATTACCAATTACCAATAACATTGATAAAGAAACTAGAATTTTTTTCCCTATGCCACTCTTATTTTTTAATGTTTTGGATCCTCCAGCACTTTGGCATAATTCTGTATGCTACTGGGTCATGAAAATCTTGCTTCTTTTTTCCACTTGGTTGGTTAGGCATAGAAGATAACACTTTGCCTGCCACTTAATAGTCATTAGTTACTTTGTACAATGCTGATCTTCAATTCACGTGGAATGGGGAAATTGGGGGCAAACCCATGTAAATTTGGCCAAAACTGCCAAAAGAACGTATAAGTCAAATCAATGAAAAGTCCATCTCCAGTGCAGTCCAACTGAACCAAAAGTTTAGGTGTTCTATTGAATTGAATAAAAGCCCCCACCATGAATTCTTTTCCAGTGGTATCAGTTGATGGCATTGCTGCTGGGCATTCTCTGCTTTTGCGCAGGGGTGCAGCTGTCTTCATGTGCAAACATTCTGTTACGCTGCCACTGGCTGACAGGTTAGGTTGCATCATGAAGCCATGGTGATCTGTGTGCTGAACAAATCTAAGCAAAGGTAAAATGGTGGAGAAGGTAGTAGTAGGCATACAGCCACCGTAATACTAAGCAGAGCTACATAATGCAAAAGGCAACAGTAAAGAAGTACACACTCATTTTTAGCGAAAACTAATGCATGAAGGTCTTTATGAATGTAAATTTATGCATGTTCCATTAGGTTCTGTGCATGCTTTCCTTGTTACCCGTGGATCCATAGATTTTGTATTAAGCACAATAGTACATATGCCTAATGCTAGAGAGCAGACTATTTATGTGACAACAAATTTGTTGTTTGTCAACAGTCACATACGATGTGTAGCTAGGAGCCTGTTACTACTATATAAACTTGTTAGCTAAAACAACAATTTCTCAGCATCTGATTCTATTGATGTTTCAGGATTTCTTGAAGTACAATGAAAACCGCTTGCAGCAGTTACCATGTCAAATATTTGAGCCTATTCCCTTGGGGGAAGGTGCTGGTGTTGGAATGATGAAGGGGGCTGACACAGTGGAAATGCCTGAAGGTTCGACACTGTATGATCTCATTCAAACTGGGATAACACATTCGCATGCTTCAGTTGGTGTTGTAGTTCGTTTAAGGAAGGAATTGTCACTTGTGAAAGATGTTCCCGTATTATTTGCAATTGATCAGGTACAGTTAATGTTGAAGCCATACCATCCCATACCTACTACGACTTCTATATTCGATGCTCATCGAATCCAATATTTCTTTCCTTGCAGTATAATAGTTGGTTTACATTCAGTGAGTTCCAGGAACCGGTGACTGTTAGATCATGTCGGCCAATTCATGCAAAAGAGCTTACAATGGTTCGTTTCACCCTGAGCCACTCACACTATGTTCAAATATTTCATTGTACTTTATTTAATATTATCCTTTGAAAGTAGTGAAAAAAGCATATTCTTTTTGCTTTCTTGGTTGGGATGGTCTAGAAACTTAGTTGATGTGTAGGTTATCTGGATCTGGGATACATAGTTATAATTTACTAGGAATTCACATATGATGTGCTCGTGGTTCTAATATGGGTAACAGAATTAATATTCCCAACTTGTCATCGTGCTCGTCATACATCACAACAGTTTTTTTTACTCCATTATTTAACCAGCTGTTTATAGTTGGAATCCTACACTAATTATGTGACATGTAGTCCTGCGATATGTTTTTCTCTTCTTGGTTTGATTCATACTTTTACACTGGTATGAATATAATTATTTTGTTATATTGAATGTTTCGCTCACTACTTCAACAGGTCAATGCTTATAGGCCAATGCTACACAATGATATGATGGTAGGAGCATTTTCACATTCAACTGCAGTTGGAAAATTACGACAGGACCTCCCAGATGTTCCATCAGATGCTCGTGTGATGTTTCCGCGGTACACTGTAAATGAAGCTGAGACTGTCTGCCACTATTATATGAGGTATACTTAGTATAAAATCTTCATAAATTTATGTACTGATGGCGTTGGATTTCTCTGTCATGATTTGCATTGACATGTATTTACGCAACCTTCCAAGTTTGTTCCTTTTACAAACCATGAACATTGCAAATTTTTTGTTGGCCAGGCAAAAGATCATCAAGCGCGAAAATTTTTCAGAAGAGAAGTGGAAAAAGATTTATTATTTGTCAAATGGAAATGGCTCAGAGATGAGATGGCTTGCTGCCTTTATCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025354