BGIOSGA025454

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Gene Name

BGIOSGA025454

Description

Calreticulin

Definition

Oryza sativa Indica Group BGIOSGA025454, complete gene.

LocusTag

OS07G0246200

Ensembl Transcript ID

BGIOSGA025454-TA

Ensembl Protein ID

BGIOSGA025454-PA

Length

3789

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:8152609..8156397

Sequence Coding Region

8152609..8152723,8153763..8153870,8153945..8154137,8154223..8154481,8154563..8154619
,8154845..8154892,8154984..8155070,8155156..8155213,8155304..8155371
,8155479..8155574,8155657..8155704,8156071..8156109,8156195..8156281
,8156386..8156397

Genome Context

<gbrowseImage1> name=IndicaChromosome07:8152609..8156397 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:8152609..8156397 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGATCCGCGCGAGGTCCTCCTCCTACGCCGCCGCGGCGGTCGCGCTGGCGCTCGCGCTGGCGTCCGTCGCCGCTGTCGCCGGCGAGGTCTTCTTCCAGGAGAAGTTCGAAGATGGATGGGAAAGTCGGTGGGTCAAGTCAGAATGGAAGAAGGATGAGAACATGGCTGGTGAATGGAACCACACATCTGGGAAGTGGAATGGAGATCCTGAGGACAAAGGTATCCAAACCTCTGAGGACTACAGGTTCTACGCTATTTCAGCGGAGTACCCAGAATTCAGCAACAAGGATAAAACCCTGGTGCTGCAGTTCTCTGTAAAGCATGAGCAAAAGCTTGACTGTGGTGGTGGATATGTCAAGTTGCTTGGTGGTGATGTTGACCAGAAGAAATTTGGTGGGGACACACCGTACAGCATTATGTTTGGACCAGACATCTGTGGGTACAGCACCAAGAAGGTCCATACTATCTTTACTAAGAATGACAAGAACCATTTGATCAAGAAGGATGTCCCCTGTGAGACTGATCAGCTGTCCCATGTGTACACTTTGATCATCCGTCCTGATGCTACATACACCATACTCATTGACAATGTTGAGAAGCAATCTGGCAGCATCTACGAGCACTGGGATATTCTGCCTCCGAAGCAAATCAAGGACCCAGAAGCTAAGAAGCCAGAGGACTGGGATGACAAGGAGTACATTCCTGACCCCGAGGACAAGAAGCCTGAGGGATATGATGATATTCCCAAGGAAATCCCTGACCCTGATGCTAAGAAGCCTGAGGACTGGGATGATGAGGAAGATGGTGAGTGGACTGCACCAACCATTCCTAACCCTGAGTACAAGGGACCATGGAAGCAAAAGAAAATCAAGAACCCTAACTACCAAGGCAAATGGAAGGCACCGATGATCGACAACCCAGACTTCAAGGATGATCCATACATCTATGCTTTTGACAGCCTGAAGTACATTGGCATTGAGTTGTGGCAGGTCAAATCAGGTACTCTGTTTGACAACTTCCTTATTACTGACGACCCTGAGTTGGCCAAGACATTCGCAGAGGAGACATGGGGCAAGCACAAGGATGCTGAGAAGGCTGCTTTTGACGAGGCAGAGAAAAAGAAGGAAGAGGAGGAAGCTGCCAAGGCCGGTGAGGACGATGATGATTTGGATGACGAGGATGCTGAGGATGAGGACAAGGCCGATGAGAAGGCTGACTCTGATGCAGAGGATGGCAAGGATTCTGATGATGAGAAGCATGATGAGCTCTAA</cdnaseq>

Protein Sequence

<aaseq>MAIRARSSSYAAAAVALALALASVAAVAGEVFFQEKFEDGWESRWVKSEWKKDENMAGEWNHTSGKWNGDPEDKGIQTSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGGDTPYSIMFGPDICGYSTKKVHTIFTKNDKNHLIKKDVPCETDQLSHVYTLIIRPDATYTILIDNVEKQSGSIYEHWDILPPKQIKDPEAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEIPDPDAKKPEDWDDEEDGEWTAPTIPNPEYKGPWKQKKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNFLITDDPELAKTFAEETWGKHKDAEKAAFDEAEKKKEEEEAAKAGEDDDDLDDEDAEDEDKADEKADSDAEDGKDSDDEKHDEL</aaseq>

Gene Sequence

<dnaseqindica>1..115#1155..1262#1337..1529#1615..1873#1955..2011#2237..2284#2376..2462#2548..2605#2696..2763#2871..2966#3049..3096#3463..3501#3587..3673#3778..3789#ATGGCGATCCGCGCGAGGTCCTCCTCCTACGCCGCCGCGGCGGTCGCGCTGGCGCTCGCGCTGGCGTCCGTCGCCGCTGTCGCCGGCGAGGTCTTCTTCCAGGAGAAGTTCGAAGGTGAATGGCTGACCTGCTCCCGATCCCGTCTCGATCGATCTGATCCGGTTCGCTGCGCGTTGCGGGTCTCGGCTTTGGATGTAGTGGAGGCGTCGCGTGGGGGTGTTTGGTGGTGGGTTTGTTTGGATCTCTGGGGTTTTCGGGATTTCTCTGGGGTCTATACGACTAGGAGGCGTGCTGGTTGTTAGGGATCTGGAGTGTTAGGCGCTAAATTGGGTGCTGATCGTGGTTTGTCTCGCCATTTTTGGATGGTTGCTGCTGCGGTATGGTGGGATCTGATTGATCTGACGTGCATTTGCTCGTGGGAATGGGATCTAGTTGCGTCGTCTAGTAAGCGTGCGCTGTGACGCTGTGTCGATCTGCTTTATGTGAATTGGTTATGGTTTTTTGTTAGATTGTGGGAAAAAAAACGTGGTTGGGTTGATTCGGATCGAAAAATGTTAGGTTTGTTTGGTATATGATCCGCAGGTTTGGATACTTCATTGTAGGGAGTAGTTGGTATTCTGCTGTATAATGTGGTGAATTTTACTTTACTTTATACTGCGAAATGGGAAAATTTAGAGCCCAGACTTGGTGATGTTTTGTGATTGAACCTTATGCTTTATGTATGTTGTTTAATTCTGATGTTTCATATGCTTAACCTGAATATGAATAAATGTTTAAGATCTGCCTATGCTAGTGCTACATTTGAAGCATACTAGTGAGAATTGGTAGCTTATGATGGTTGTCACCTGTCCGTGTCCATTAGAATGTGATTTGCCACTTATCTGCATATGGGATATGGCATTATGAACCAGGTGCATTTTACACTTCAGGTTTTGGCGTATAGTTTATTAGTTCTATACGGTATGTCTGGAGATCCATAATTCGAATGTGTTGATCTGTACTGCTAATGTCACCTGTTAAAATTTTGTCTGTACTACTATTTAAGGAAATCTCCGGGCAGATAATGAATTTGCGTGATCATTTGCTGGTTCTGCACATGATGCACTGAACATGGAGTTCTGTGTTATCTAAATGTATTCTATTGTGTGCACAGATGGATGGGAAAGTCGGTGGGTCAAGTCAGAATGGAAGAAGGATGAGAACATGGCTGGTGAATGGAACCACACATCTGGGAAGTGGAATGGAGATCCTGAGGACAAAGGTAAATTGGAAGATCAATACACCTCATTCAGACACTAACAGATGATTTTTACTGAATTATTTTTCTTGTTGCAGGTATCCAAACCTCTGAGGACTACAGGTTCTACGCTATTTCAGCGGAGTACCCAGAATTCAGCAACAAGGATAAAACCCTGGTGCTGCAGTTCTCTGTAAAGCATGAGCAAAAGCTTGACTGTGGTGGTGGATATGTCAAGTTGCTTGGTGGTGATGTTGACCAGAAGAAATTTGGTGGGGACACACCGTACAGGTAATGATTTTCTTCTATTGTAGCTCTGATTCTCACTTTTCTCAAGATTAGTACTAGTTATCTAACTTGGTACTTTTGAATGCAGCATTATGTTTGGACCAGACATCTGTGGGTACAGCACCAAGAAGGTCCATACTATCTTTACTAAGAATGACAAGAACCATTTGATCAAGAAGGATGTCCCCTGTGAGACTGATCAGCTGTCCCATGTGTACACTTTGATCATCCGTCCTGATGCTACATACACCATACTCATTGACAATGTTGAGAAGCAATCTGGCAGCATCTACGAGCACTGGGATATTCTGCCTCCGAAGCAAATCAAGGACCCAGAAGCTAAGAAGGTATTTTGCATATTCCTAGCTTTCTTGGAATGCCTTGCTTTTGTGTCTCTTGAATGTTAAGATATTACCTTATGATTACAGCCAGAGGACTGGGATGACAAGGAGTACATTCCTGACCCCGAGGACAAGAAGCCTGAGGTACTTTTCCTTTGTTCTGACTTCCGATATATCTTGTAAAAATGACTAACTTCGTATCTTGCATGAATGAGAAACGGGAACCTTAGCTGACCTGAATTAGAAAAGTTCACACTATATTGTACTCTTGTAATACTATATGTCTTAATAGATTTAAACGTGATGCTAGAAACTAGGAAGAAGCTACATGTTTTTGTTGTGTAATGACTTGTGGTATGCTGTTTCCAGGGATATGATGATATTCCCAAGGAAATCCCTGACCCTGATGCTAAGAAGGTACTTAATTGTTATACCATTTTATGGTTTTATGTTATATATGATGAGCGTCATTCTAGGTTTTAAAATTTCTTTGATGTGATTTCTGTAGCCTGAGGACTGGGATGATGAGGAAGATGGTGAGTGGACTGCACCAACCATTCCTAACCCTGAGTACAAGGGACCATGGAAGCAAAAGGTGTGAATATCTGTTTACTGATGCAGATGCACTTGAAACACTTGCATATTTCTGGTTTCTGACATAAACATGTTTCTTTTTCCAGAAAATCAAGAACCCTAACTACCAAGGCAAATGGAAGGCACCGATGATCGACAACCCAGGTATAATTGCCTTTAATTGAACAACTTGGTATTACACATTTTTCAGATGTTGAACTCTGCATTCTGAACTGTTTCCTTTGTGGTTCACAGACTTCAAGGATGATCCATACATCTATGCTTTTGACAGCCTGAAGTACATTGGCATTGAGTTGTGGCAGGTTAGTTAAGCAAAGTACAGTACGCCTTTAGTTCTGATTTATTTTGCTGGGTCAGGAAGACAGACATAAATAGTTATGAACTTATCCCTTCTCTCTTCTATCAACAGGTCAAATCAGGTACTCTGTTTGACAACTTCCTTATTACTGACGACCCTGAGTTGGCCAAGACATTCGCAGAGGAGACATGGGGCAAGCACAAGGATGTATGTCGTTCTTCACCTAGCTTTTACCGTGTAATAGTTTCGTTATCAACCCAACATGCTCTAACATTAGTGAATCTTGTAGGCTGAGAAGGCTGCTTTTGACGAGGCAGAGAAAAAGAAGGAAGAGGAGGTAAATTCCTTCACCTTACAATGTTCTAATATGAGGATGATGGATGTACAACTGTCCTTGTCATTGCATTTCAGTCTGTGCTCCATTTCACTGTCTTTGCTATACGTTTTGATTTTTGTTGGCATGAACACCAGTTCCTTGATGATCAGTGGGCCATTGCTTCCACTTAATTATACTATGGTGTGCTCAAAACCTTTTAACTCACTGGCATGGTTATGTTATTTGTAGTTTTACGTATTATCTTCTGATTGTTACACCAGCATAGCTTTAAGCAACTGAAATATTCTCCTTTGCTGAACTGCCATCACTCGTGGTTATTGTGGATGTAATTTGCTTACCATTGATTATCAATGTCCTTGTTAACAGGAAGCTGCCAAGGCCGGTGAGGACGATGATGATTTGGATGTAAGATTTGCATCCGTTCTTCCTCCATGTTCTATATTTTCCTTTTGGGCTTGATCTAAACCTCAACAACATTTATATTTCACAGGACGAGGATGCTGAGGATGAGGACAAGGCCGATGAGAAGGCTGACTCTGATGCAGAGGATGGCAAGGATTCTGATGATGAGAAGCATGTATGTAACACTCCTGCGTTTTCTTGATACCTTCTGGATTCTGGTGATGCATTTCCTGTTAACCTCCATGTGTCCTGATCTCTTGTACCGTCCTTCCTTTCCAGGATGAGCTCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025454

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA025454&oldid=51048"