BGIOSGA025604

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Revision as of 06:31, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA025604| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA025604, complete gene.| tag = OsI_258...")
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Gene Name

BGIOSGA025604

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025604, complete gene.

LocusTag

OsI_25820

Ensembl Transcript ID

BGIOSGA025604-TA

Ensembl Protein ID

BGIOSGA025604-PA

Length

4450

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:13304356..13308805

Sequence Coding Region

13304356..13304376,13305512..13305963,13306073..13306145,13306256..13306336,13306605..13306668
,13307248..13307335,13307418..13307502,13308767..13308805

Genome Context

<gbrowseImage1> name=IndicaChromosome07:13304356..13308805 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:13304356..13308805 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTCGCTTGGAAGGAGAAGGCAACGCCTTTTCCAGTGGAGCATTTTACTTCCCCTAAGAAAGGATCATTATCTTCTTACGTGATGTCCCTTCTACCAACCTCAAATCCGGGACATGAAAGGACTTCACCGAGTTCACAGCATATGAAACCACTGCCTCCTGAATCGCTTCCTAAACGATGGAGGGGGAATGATTTCTTGTGGCATGATCCGCCCCTGGCATTAAGTGAGGAATCTGGATCTGAAAGTGAGAGAGACGAAAGGAATGGAAATTCTAATAACGAGCAGATCCTGCAGTCACACAGGCCCATCGATAACTCAAATGGAAATGAAGAAACATCAACATCAGACTGCACAGACTCTCTTTATTATTTAACTGAAAAGTCTACATTTATATCTCTAAAATTGTTTGGATTCTTTCAATCTTCTCTCCCTGGGACCTTAAAGGGTTGTCACTGGGTTTTGCTATATAGCACTTGGAAGCATGGAACATCGCTAAGAACACTTTTCCGTAGGAGTGAAAATCTCCAGGGTCCATGCCTATTGATTGTTGGAGACATGCGGGGGGCTGTGTTTGGTGGCTTGTTAAATGGTCCTCTCAGGCCTACAGAGAAAAGAAAATACCAGGGAACTAATCAGACATTTGTATTCACAACGATTTATGGTGAACCTAGGCTTTTCAGACCAACCGGTGCCAACAGGTACTACTACTTATGCTTGAATGATGCTTTGGCATTTGGAGGAGGTGGGAGTTTCGCGTTGTGCCTCGATGAAGATTTGTTACATGGAACCAGTGGATCATGTCAGACATTTGGGAACTCATGCTTGGCTCATAGTCCAGATTTTGAACTGAAGAATGTTGAGCTGTGGGGTTTTACTCATTCATGGGGTCGTTCAACATAG</cdnaseq>

Protein Sequence

<aaseq>MLAWKEKATPFPVEHFTSPKKGSLSSYVMSLLPTSNPGHERTSPSSQHMKPLPPESLPKRWRGNDFLWHDPPLALSEESGSESERDERNGNSNNEQILQSHRPIDNSNGNEETSTSDCTDSLYYLTEKSTFISLKLFGFFQSSLPGTLKGCHWVLLYSTWKHGTSLRTLFRRSENLQGPCLLIVGDMRGAVFGGLLNGPLRPTEKRKYQGTNQTFVFTTIYGEPRLFRPTGANRYYYLCLNDALAFGGGGSFALCLDEDLLHGTSGSCQTFGNSCLAHSPDFELKNVELWGFTHSWGRST</aaseq>

Gene Sequence

<dnaseqindica>1..21#1157..1608#1718..1790#1901..1981#2250..2313#2893..2980#3063..3147#4412..4450#ATGCTCGCTTGGAAGGAGAAGGTGGGCGGACAGGCTCGCCCGGCCTCCTCGCCGACTCCCCCGCCTCCCCCTCCTCCGCAGCCGCCACACCACCACCACAACCCGCCACCGCCGCCGCCGCCGCCGCCGCTGCCGTTGAGCCGCAGGTGAGATCCGCGTCCCTCCCTCCCTTCCCGCGCGGGCACGCTGTTCCGGATCCACATTTTCCATTTCTTTTTTTTTTAACCTCGCACAAGAATTTGGTGGTGGTTGGTGTGGGGTCGCCTCGCATTCGCATCCAACCCGGTGGTTCTGGAAGGCAGAGAAGCGGGATCCTCGGAGGGTGACCCATGTCGAATCGGAATCGAAGAATTGTTTCTCTTCCTTTGTAGAACGTGTAATTCTTCGATGTAGAAAATTGCATTGCGGCGTAGATATGTATGTGTTCCTCGTGTTCATTTGGATCTGGGGGCTGATTTGAAAGGCGCCGCCATGTAGGGGAGGTGAGTCACATGAGAGTTCTTTGAGGAACGCTGGCCTCGTTTGCTCATTGCCTGTCCCTTCTCTGTGATCAATTTGATATATTAGTATGTATATAGTTACTTTGTCGCTGTGAAAGCTCGGGTGCAGATTGGTGCTTAATAAGTTGATGTTGTGTTGTCTAATGATTTTGTCTTCTCCCAAGGCATTGATGTTCTTTCTACATGTGAATTTTCTCACATTTGATAGTTGAGAGTTGACACTTTAGCCAGGAGAGACTATTCTTCGGTTTTCAGGATAAAAAGGTTGTGTTTTGGCAACAAACCTGAGTGCCGGTAACTGCCTAACCCATTAACGATGGAGGCAATGTTGCAACGTATATAGGTGTACAGAAAAAAAATACTAAGTTTGAGCTGACTCAATACTGATGTAGTGCCTATTTGTGATGCACAGTCTTAGTCTTTGAAACATTAATGACTTGTTTAGTTCATAGAAAGAAACATTTTAAATATTTTCATGGCTTGTGTCAGCTTAAGCAGCAGTACCTCATAATTTTTACAAGTTTAAGCTGTGGTACGTCATAACTTTTTGTTACTATAGTTTTACTAGTTCAAAGATGTTGCTTTCTTGCATATATCATGTTTTGTTTGTTTGCTGTACTTCCGTATTAATACTTAATAGCAATGTGTTTATTCAGGCAACGCCTTTTCCAGTGGAGCATTTTACTTCCCCTAAGAAAGGATCATTATCTTCTTACGTGATGTCCCTTCTACCAACCTCAAATCCGGGACATGAAAGGACTTCACCGAGTTCACAGCATATGAAACCACTGCCTCCTGAATCGCTTCCTAAACGATGGAGGGGGAATGATTTCTTGTGGCATGATCCGCCCCTGGCATTAAGTGAGGAATCTGGATCTGAAAGTGAGAGAGACGAAAGGAATGGAAATTCTAATAACGAGCAGATCCTGCAGTCACACAGGCCCATCGATAACTCAAATGGAAATGAAGAAACATCAACATCAGACTGCACAGACTCTCTTTATTATTTAACTGAAAAGTCTACATTTATATCTCTAAAATTGTTTGGATTCTTTCAATCTTCTCTCCCTGGGACCTTAAAGGGTTGTCACTGGGTTTTGCTATATAGGTAAGCAGTAAATCAACATGCCATGGTTGAAATTTTTATTTAATCATGCCTTGTGTAGTATTACCTTTTGATTTCTTCATTCTTTGTTGTTTTGGCAAATGAAGTGCAGCACTTGGAAGCATGGAACATCGCTAAGAACACTTTTCCGTAGGAGTGAAAATCTCCAGGGTCCATGCCTATTGGTATGTCTATGATTTATTTACCATTTTGAGGTGTTATGTGTCATTACAATTCAACTTGTTTCTAGAAGCTGGGTTTCAACTGACAATATTTCTCACCTTTCTCATGTTAGATTGTTGGAGACATGCGGGGGGCTGTGTTTGGTGGCTTGTTAAATGGTCCTCTCAGGCCTACAGAGAAAAGAAAATACCAGGTCAGCCATTAGATAGCTTTTCGTGCTACTTATGCTTATGAAGTCATGCTATGAGGGCATGAGCCCTAGTTCACCAAGGCACTAGAAGCTAGTCAGGTGGCAAGCCAGTGCCTAGGGCCTAATTTGTAATTAGGCTTGCCTAGGCAGGAGAATGCCCTTCAGTGCCTAGTATTGCCTTAGCAGGCTAGGTTACTGCCTTTTAGACCATCCTTTATTAGGTTTTTCCCTAGTTTGTGTAATGATTGTATTTATATTCCTGATGAAGCAGGGAACTAATCAGACATTTGTATTCACAACGATTTATGGTGAACCTAGGCTTTTCAGACCAACCGGTAAGCATTTTATTTTGGTATACCTTTTTGGCGTCGGAGAACAATTTTTTGTTTTGGCACATTCTTCATAAATTACACATCTTCTGCCATTATAGTTTTGAACTTCTACAGTTGTCACATCAAACTGGTTGATGTGACAAGAAAATTTGGTTCCACTTCTCTTGATGATTGGTCAGGAATATTGCAATGCATTTTCATGAAAGTAGCCAGAATGATATGGTGATGGATTGTGATTTTATGGTGAAAATTCCAAATGATCGCATAACTTTATAATTTACATGTTAATGTTGTATGTAATATTCACCTTTTGCATTTTGCATAATGCCACTTTTGTTGATCCATTGGTCAGGAAAATTGCAATGCATTTTAATGAAAGTAGCCAGGATGATATGCTGATGGATGTAATTTGTGGTGAAATCTATAATCTACCATGTTAATGTTCTATGTAATATTCAAGAAATATAAAATGAAATTTATGTACCGCTTGATTCATTTTAATAGTAGTACAAATGTTCTGTATCAACATAGAGAATATACTGTTAAAATTGAAGTTGTACTTGTCGGAACAAAAATATTCAGGTGCCAACAGGTACTACTACTTATGCTTGAATGATGCTTTGGCATTTGGAGGAGGTGGGAGTTTCGCGTTGTGCCTCGATGAAGATTTGTAAGTTGCTATTGTGGCATACAATTTCCTCGATTTGCGGAAAACAATCATAGTTAGTATTATATCTTGATTTATGGAGTAGGTTACATGGAACCAGTGGATCATGTCAGACATTTGGGAACTCATGCTTGGCTCATAGTCCAGATTTTGAACTGAAGAATGTTGAGGTAAGATGATGTTTTTTTACATTCAAGTCTAAAGACTTCTTTGGACTTTAAGTCATATTATCTCACAAGTTAGTAGAATGCTCAAGTACTCTAGTGTGATCATGATGAAAAATGTGCACCATGCTGGGCCACGACTAGCATAATCTCGACATTTATAAATTTTAACTTCTGTTACTTTTGGGACAGTATTTGATCATTTGTTTGCTACACGGAATATGCACGGGAATTTTTTTAAGTATAATATTATTTTTACCATAATATTTCTAATATTATCAACACCAGATCCTTTTTACAAATAGTTTGATATCTCTATAAAATGAAAGTAGCTAGTAGTAGGTGGTGTTTGAATCTCCTGAAGATGAAGATAAAGATAAAGATTAAGTGTTTCACGCAAAACAAGGTGGTAATAACGTGTGATTAATTGAGTTTTAATTATTACAAACTTGAAAAAGGATTAATCTTATATTTTAGAACAACTTTCATATAGAAAGTTTTCGTACAAAACGTACAGTTTAGAAGTTTGAAAAGCGTGCCGCGAGTATCTAAAATTCAATCCAACTTTTGTTGGAGAAAAGAACAGGGTCAGGTGGTTGGTGGTTGTGAGTATACCCCATCCCACAACTGACCCCTCGAGTTGTGGGATCTTCCAAGAATGAGGATATGCATTTGTCCGTATGGCTTCTAGGCAATGTTCGATCGTGCTGAAGAGACAGGGATTATTGATTTATTGCGGCATGGAAAACATGGCAGATCATTAATTAAGAAAAATGTTTTAAAATTTGAAAAATGGGTTTATTTGATTTTTAAAAAAATCTGCACAGAAACTTTTCTTAAAAAAAATGTTTTGCAGCTTGGGAGGCGTGCCTGCGATAATCTACTAACCAGTAGCTGAATCAAACAGGGCTTTTTGTGGCAACATTATTTGCGGTATTGATGTTTGATTGCGGATTTTGTATGTTTTCTCCTAAAAATGATGCAACTTTACTAGTTTGAAAAGTATGATATACTTCTATTTGAAGTCTGTTGCAATGCATGGTTACTTGGCTAGTCAGGAAAGATATAACCAGTCATAAATGATCACAGATCAAAGATAGGAAGTTCATATGCACTTCTCCCAATGACATGTTATTTGCATCTGAAATACTACTACTACTTTTAGATTGCCTTCTATGATGGAGTTAATCCGCATATGTTTCCGCTGAGTATACATTTATAAATAGGTCATTTTGTTTATTCTCCATTACTGACGTCTTGTTCTCTGCAGCTGTGGGGTTTTACTCATTCATGGGGTCGTTCAACATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025604