BGIOSGA025652

From RiceWiki
Revision as of 06:32, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA025652| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA025652, complete gene.| tag = OJ1634_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA025652

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025652, complete gene.

LocusTag

OJ1634_H04.119

Ensembl Transcript ID

BGIOSGA025652-TA

Ensembl Protein ID

BGIOSGA025652-PA

Length

3974

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:14789168..14793141

Sequence Coding Region

14789168..14789267,14789280..14789676,14790632..14790751,14790848..14790980,14791549..14791713
,14792971..14793141

Genome Context

<gbrowseImage1> name=IndicaChromosome07:14789168..14793141 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:14789168..14793141 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCCGCCACCTTCCCGCCGCGCTCCGGCGACGCCTCTCCGTCCTCCCCTCTCCTCCCTTCCCCGACGTCCCCCGACCGCCGCAGCGGCGGCGGCGGAGGCGGAGGACGCCTGCTTCCGGGGCTGCGCGGCGCGGCGCGGTTCCTGGGCCGCACGGGGAGCCGCCGCCTGATGCGGGAGCCGTCGGTGGCGGTGCGGGAGACGGCGGCGGAGCACCTCGAGGAGCGCCAGACCGACTGGGCCTACTCCAAGCCCGTCGTCGTGCTCGACGTGCTCTGGAACCTCGCCTTCGTCGCCGTCGCCGCCGCCGTCCTCGCCGCCTCGCTCCCGGAGTCCCCCTCGGTGCCGCTCCGCGTCTGGCTCTCCGGGTACGTGCTCCAGTGCCTCTTCCACGTCCTCTGCGTCACCGTCGAGTACAGGCGGCGCCGGGAGGCGCGCGGCGGCGGCTTTGGGGCGGACCAGGGGGCTGCGGCTGATGGGGATTTCAAGCTCAGTATTGTGAAGCACCTGGAGTCCGCAAACACGATGTTTTCTTTCATATGGTGGATCATTGGGTTCTACTGGATATCTGCAGGTGGCCAAGCTTTGTCCCATGATGCTCCTCAACTTTACTGGCTCTCCATTGTGTTTCTGGCATTTGATGTTTTCTTTGTAGTCTTCTGTGTTGCCTTGGCCTGTGTGATTGGCATTGCTGTCTGTTGCTGCCTGCCTTGCATTATTGCTATCTTATATGCTGTAACTGATCAGGAAGGAGCATCTGAAGAGGACATCAACAACCTGTCCAAATTCAAATTTCGGACAATGGGTGATGCAGACAAGCTGGTTGCTGGAATTGCAGCACCTGTGGGTGGAGTAATGACTGAGTGTGGCACCAATCCTCCTGTTGAACACTTCCTTTCTGCTGAGGATGCTGAGTGCTGCATCTGCTTGTGTCCCTATGAAGACGGTGCGGAACTTCGAGAACTCCCCTGCAATCATCATTTCCACTGTACCTGCATAGACAAGTGGCTTCACATAAATGCAACATGTCCCCTGTGCAAGTTCAACATCATCAAGAGCAACCTTGGTCCAGAAGACGTCTAG</cdnaseq>

Protein Sequence

<aaseq>MASATFPPRSGDASPSSPLLPSPTSPDRRSGGGGGGGRLLPGLRGAARFLGRTGSRRLMREPSVAVRETAAEHLEERQTDWAYSKPVVVLDVLWNLAFVAVAAAVLAASLPESPSVPLRVWLSGYVLQCLFHVLCVTVEYRRRREARGGGFGADQGAAADGDFKLSIVKHLESANTMFSFIWWIIGFYWISAGGQALSHDAPQLYWLSIVFLAFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVTDQEGASEEDINNLSKFKFRTMGDADKLVAGIAAPVGGVMTECGTNPPVEHFLSAEDAECCICLCPYEDGAELRELPCNHHFHCTCIDKWLHINATCPLCKFNIIKSNLGPEDV</aaseq>

Gene Sequence

<dnaseqindica>1..100#113..509#1465..1584#1681..1813#2382..2546#3804..3974#ATGGCGTCCGCCACCTTCCCGCCGCGCTCCGGCGACGCCTCTCCGTCCTCCCCTCTCCTCCCTTCCCCGACGTCCCCCGACCGCCGCAGCGGCGGCGGCGGCGGCGGCGGAGGAGGCGGAGGACGCCTGCTTCCGGGGCTGCGCGGCGCGGCGCGGTTCCTGGGCCGCACGGGGAGCCGCCGCCTGATGCGGGAGCCGTCGGTGGCGGTGCGGGAGACGGCGGCGGAGCACCTCGAGGAGCGCCAGACCGACTGGGCCTACTCCAAGCCCGTCGTCGTGCTCGACGTGCTCTGGAACCTCGCCTTCGTCGCCGTCGCCGCCGCCGTCCTCGCCGCCTCGCTCCCGGAGTCCCCCTCGGTGCCGCTCCGCGTCTGGCTCTCCGGGTACGTGCTCCAGTGCCTCTTCCACGTCCTCTGCGTCACCGTCGAGTACAGGCGGCGCCGGGAGGCGCGCGGCGGCGGCTTTGGGGCGGACCAGGGGGCTGCGGCTGATGGGGATTTCAAGCTCAGGTGAGGGTTTGCTCGGATCAACCCCCCAAACACTTCGTAATCCTAGTAGATATGTGCTATTAAAAGTATCTCGAACTTATGCATGCCACTCTGGAATCAAGTCGATGTAACAGTTTTTTTTTCCCGTTGATTCATCACTGCTATAATTATCGTATTCCCATGTCAATTATGAATTCTGTTGGTTTTATATTTTTTATTCATTTCTGTCTTTGAAGTGCTGGTGCAGCCTGTAGTATTAGTTTTCGATTTACCTTCAATTCAACTAATAGTTTGGCAAATGCTACTGTGTCTACTTATATGGTAAATTCTTTCTTGGATTTTTAACAACAAATTTATTTGATGTGGCAATTCGTCTTTCGTAATGCCTTCAACTCATCATCCTTGAGTACATTACATTGCTCAAACGAAGATTATTCTATTAGTTTTTCACTTTTTTAGAACTATTCTTATGTGATCTTTCAGTGTGCTGTTGATACTATTGCATTTGCAATTTTAAAGTGGGCATTGTTAGGCAATGAATTTGTGGCATATGTTAGTATAGGATAACTGCAAATTGAATGGGCAAGAATGAATTCCATTTTCTTTGCATTGGGCTGTGGACACTGGACCCTATGGGAGAGTTATGAGCTAATGGGTCGAGCCCTGTTTTTTGTGATCTATTTACCACCCATGACATTGAGTTGAGTTGGTGTTTGAAATTGGCAACATGGAAGTACGAACTATGTCTGAATCAGGCAAATGATATGTATGGAAATTCTATTGATTTATAATTAGATGCTAAAAGGGTATCATCAACTACTTTTACTATCAGTAGATTTATGCTATTGATTTGTTTGCCATGTTCAACATTGTCATTTTCTCATTTTCTGTAAACTTGCATTAGGAGTTGGTTGCTTAAATACTTAAACTTAATTGTGTTTCTGTAAACTTAGTGTTTTATGTATATATTGTTCAGTATTGTGAAGCACCTGGAGTCCGCAAACACGATGTTTTCTTTCATATGGTGGATCATTGGGTTCTACTGGATATCTGCAGGTGGCCAAGCTTTGTCCCATGATGCTCCTCAACTTTACTGGTACACACTTAGTAGCTGTGGCATGTGAATGATAGTATGTATTATCATTAGTGGCTGTTGTCTAAGATGTTTATCTTATTGCCCATTATTTTGCAGGCTCTCCATTGTGTTTCTGGCATTTGATGTTTTCTTTGTAGTCTTCTGTGTTGCCTTGGCCTGTGTGATTGGCATTGCTGTCTGTTGCTGCCTGCCTTGCATTATTGCTATCTTATATGCTGTAACTGATCAGGTATGCCAGTTCTTGTTTAGGACAGATATATTCTTCAAATGGTTGTGATGAGATTTAGATGATCATATGATCCTGTCTCTGCTTTGTGTTCTAGATACATTTTCTTGAAAAACAATTTTCCAAATGCAATTGCTTATGTTCTATTTGTGCAATTTAAGCATTATTACTATATTACACATACATCACTCTACTTTTGTCTACAGTTCATTTTATATCTCTTAAAGACATCCATGTCTTGAAAGAAAGAATAACCTCTTCTGCTGTGGTATAAATACTTTTTAGTAGAAGTATTACTTCAGAGTGGTTTTGCATGCAATGACCTGCTATCAACATCGTTTTGAACTCTTTTAAAGGTAGTTTTGTTTCTTTTCTCACTATGGCAGTTAGTTATCACTCATTATTTCTGAATGTTCCATGCTAAATATGATTTTCAAAAGTCTGGAACTGTTCTTGTTAATCAGTTATCTCCCCTTGACATAAGCCTAATAAAACAGTATGTGGACTGATACATCCAGAAATAATCATCTCACATTCATTGCACTGAGACTATTTGTTTGTTTTTAAGCAGGAAGGAGCATCTGAAGAGGACATCAACAACCTGTCCAAATTCAAATTTCGGACAATGGGTGATGCAGACAAGCTGGTTGCTGGAATTGCAGCACCTGTGGGTGGAGTAATGACTGAGTGTGGCACCAATCCTCCTGTTGAACACTTCCTTTCTGCTGAGGATGCTGTAAGTTTTCAGTTTCCCCCCTGAAATTCTGTTAGCACAACTGTATTGTTATTCTCACTACATAGCTTGTCATGGATACTTTGGAATGTCATGGCACTTGCCTTTGTTTATTGGACGTCAAGGATCTAATTTGTAACCACCGAATACTTCTGTACCAAGAGTGCTGCTTGAAATTTGTTCATTTAATCTTCACAAAATCATAGAAGCATTTCTTAGCAGCTAGGCATGTTAATGCGAAAAAATTGTATCGATTGATGCCTATCTATTGTTCATAAACTCACTAACCATATTTAATACTCCCTCCGTCCCAAAATATAACAATCGAGTACTGGTTTGGACAACAACTAGTACTATGAATATGGTGAGGCCAGATGTCCTGGATTCATAGTACTAGGTTGTGTCTAATACAGTATTAGATTGCTAAATCCCTCGTGCACTTTATACAAACTGCAGAAGATAAACATGGTTGTTTCAGGTATAAATTTGTTTAGAGCTTGAGATTTTGTTTTACCCCAACATAACAGTCTGTGACTAACCCCAGCCAGTGTCATTAGTCTAACCTAGCAGGCTAACTCTAGTTTAGTTTAGTAGCTTAGTTATCCCAGTTGGAATTATGTGAAGTAGGTGACTTAACAGATGGTGAAGACTCTGTGACTTGGTCAAGTATTAACATGTTAGATTGTGATATTTTTTAAGCCCATTTAGGTATGCCTGAATTAAGGAAGCTGAACAGGCTTGTGGAATTGAAGCCATATGTATATTACTCTGTTAAGAAAAACTGTGGACAAATCACACGGTCCCCTTGCTGCTGTTGAAATCTATAATAGTATAATATGTAACTAACAATTAATTTCTTGGATCTTAATTTGATACCATACCAAACTGTACAAGTGCTATACGGCACTTCAAGTACTTTACCAAAACATAGCTTGGAACTGCTCTGGGGAAAAAAACTTGGAATGGAGCAAGTTCCTGTTAAGATATCTGAAATTGTATATGCATCCTGTAGTACTTTCCAATTCCAGCTTTTAGTCAAATTGTTACCTCATTTAGTTTGCCTTTCACCTGAGGAAAAAAAACTAGTTTAAGCTGGCCCTCCATACTGATGCTGGATATCGCAAAATTGACTTGAAAGATGGAGCAATGCCAATATTTTCATGGATGGCCAAAGTTATTGAAACAAATACAACTAGTGCCATTTTAAGAGGTATTGTATCTTATCGATCATTAACCCACTCTTGTACCTGTCAAATGCAGGAGTGCTGCATCTGCTTGTGTCCCTATGAAGACGGTGCGGAACTTCGAGAACTCCCCTGCAATCATCATTTCCACTGTACCTGCATAGACAAGTGGCTTCACATAAATGCAACATGTCCCCTGTGCAAGTTCAACATCATCAAGAGCAACCTTGGTCCAGAAGACGTCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025652