BGIOSGA025664

From RiceWiki
Revision as of 06:32, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA025664| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA025664, complete gene.| tag = P0003B0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA025664

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025664, complete gene.

LocusTag

P0003B09.27

Ensembl Transcript ID

BGIOSGA025664-TA

Ensembl Protein ID

BGIOSGA025664-PA

Length

7914

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:15113730..15121643

Sequence Coding Region

15113730..15113802,15113890..15114008,15114098..15114267,15114348..15114494,15115228..15115279
,15115703..15115877,15116496..15116578,15117500..15117712,15118821..15118952
,15119490..15119625,15120140..15120247,15121059..15121124,15121203..15121462
,15121548..15121643

Genome Context

<gbrowseImage1> name=IndicaChromosome07:15113730..15121643 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:15113730..15121643 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGCACGACCCCAAGGACGACGTCGACCGCCTCTTCGCCTGCTTCAAGTGCGGCGTCTCCCCTCCCCAGTCGGCGTTCAGGGAGAGGCCGCGGCGGGCGGGCAAGAGGTCGCGGGTCGCGTCCGCGGCGGATGGCGGCGGCGGGAGCTCCTCCTCTTCTACTCCCACGCCGGACGCGGCGGAGAAGCATGAGGCGCCGTCGTCGGCGGTGATCAAATTTACCGGCCGCAAGCAGATGTCCCCGGTTGTGTTCTACGGTTCCCCGCAAGGTGTCCCGGTGAAGAAGCCGCTGAGCCTGTTGCGGTTGTTGTGGGAGATCCGAATTGATCTCAAGAAGCAAACTGATTTGGTCCCCAGTGCCGGTGTTTGGGCAACCTTCCCTAGGCAAGAGGAGGCAATCAGGTTCTGTAAAGCACATGCGTATACCAATGTCTTTAGCTACCAAGATCATTTAACTGGGCAAAGAAGATTCCTCGTGTCTACGTACGATGAGTTCTGGAAAAGGTACAATAATATGGATCCGCAGATTCGCCATCACTATGAAGTTATACAGGATGGTTCACCTTGCCATATTTACTTTGATCTTGAGTTTGACCCAAGATTGAACAAGATGAGAGATGCAGATGAAATGGTGGATATATTGGTTGCAGTCACATTCAGTGCTTTGCATGATAAATATTCCATTGAAGGACAGGAGGAATGGATAATAGAGTTAGACTCGTCTACTGAAGAAAAGTTCTCACGCCATTTGATCATCCGCATTCCGAAGACTGCATTCAAGGACAACTCCCATGTTGGTGCATTTATCTCTGAGATCTGCTCACGGATTGCATCTCAGCGTGCAGCTAATCCTAACTTTGATAAACTGTACATTACGAAAGATAGCAGTTGTACAGGTCGTGCTGATCATCTCTTTATGGATACTGCTGTTTACTCCCGGAATCGTTGTTTTCGTTTAGCCTTCTCATCGAAGTCTGGGAAGAAGTCATTTCTTGTGGCTACTGAGCGTTTCAAACATAAAAACATGAGTGGTAAGGAGCTCTTTATGGAGTCACTTATTTGCAGATTAGATGATGACTGTGATAAACTTTTGACATGCAAACTTGATTTAGATTGCAAGAAAACATTGCATTTTGACTCGGAAGCCAGCATGATACGAATTCAAGGAAGAAACAGCAAGGACTCCATTGGTACCTATCAAAATGATTTTCCTGTTTCAAATACTTATGGAATATCTCCTTTTCCAGCTCTGGATGTCTTTATTGAATCTATAGCTTCTTTTGGAAATGTCTCAGGAAAAATTAGATGCTGGTACTGGTTTTCACATTATGGTTTGATGATTTATAGTATGTCAAGGAGTAGATACTGTGAGCATATTGGAAGAGAACATAAAAGCAATCATGTGATGTACATTGTTGAATTCCAGAGAGCTGCATATTACCAAAAGTGTTATGACCCTGACTGCCAAGGTTACCGTTCTCCATTGCGCCCTGTTCCCTGGGACGTGATTCCTGAGCTCAGCTCGATATCCGATTCAGCCCAGAGGGAATATCAGGGGGAAGTTGTGGAGATCAACATTGAGGGCAGCAACAGGAATGATGAGTACCTTTGCAATGGAACGAAATCAGTTACAGAGAGCGGTGAGGATGATCCTAGCTGGTGGGAAGAAGCGGTGAAATTTGCTGACAGCATCGAGAACACCGATCATGGTCCTGACACACGTGACCAAGAGGACAAGGATTGTGATGACGCAGACTGGTGGATGGACGCTGAAAGGATTATGGTGCAGATTGAGGAACAGATAGGGTCACAGAGCAACGCATAG</cdnaseq>

Protein Sequence

<aaseq>MAAHDPKDDVDRLFACFKCGVSPPQSAFRERPRRAGKRSRVASAADGGGGSSSSSTPTPDAAEKHEAPSSAVIKFTGRKQMSPVVFYGSPQGVPVKKPLSLLRLLWEIRIDLKKQTDLVPSAGVWATFPRQEEAIRFCKAHAYTNVFSYQDHLTGQRRFLVSTYDEFWKRYNNMDPQIRHHYEVIQDGSPCHIYFDLEFDPRLNKMRDADEMVDILVAVTFSALHDKYSIEGQEEWIIELDSSTEEKFSRHLIIRIPKTAFKDNSHVGAFISEICSRIASQRAANPNFDKLYITKDSSCTGRADHLFMDTAVYSRNRCFRLAFSSKSGKKSFLVATERFKHKNMSGKELFMESLICRLDDDCDKLLTCKLDLDCKKTLHFDSEASMIRIQGRNSKDSIGTYQNDFPVSNTYGISPFPALDVFIESIASFGNVSGKIRCWYWFSHYGLMIYSMSRSRYCEHIGREHKSNHVMYIVEFQRAAYYQKCYDPDCQGYRSPLRPVPWDVIPELSSISDSAQREYQGEVVEINIEGSNRNDEYLCNGTKSVTESGEDDPSWWEEAVKFADSIENTDHGPDTRDQEDKDCDDADWWMDAERIMVQIEEQIGSQSNA</aaseq>

Gene Sequence

<dnaseqindica>1..73#161..279#369..538#619..765#1499..1550#1974..2148#2767..2849#3771..3983#5092..5223#5761..5896#6411..6518#7330..7395#7474..7733#7819..7914#ATGGCGGCGCACGACCCCAAGGACGACGTCGACCGCCTCTTCGCCTGCTTCAAGTGCGGCGTCTCCCCTCCCCGTAAGCTCCTGGACCTCGAAAATGGCCATTCTCTCCCTTTTCCCCCCAAATTTCTGATCCGGTCTTGTTCCAATCGGATGGATTCAGAGTCGGCGTTCAGGGAGAGGCCGCGGCGGGCGGGCAAGAGGTCGCGGGTCGCGTCCGCGGCGGATGGCGGCGGCGGGAGCTCCTCCTCTTCTACTCCCACGCCGGACGCGGCGGAGAAGGTGCGCGTGATTGGGTCTCCCTGAGTTTCTAGCTTAGAATGTACGGAAGAGCAAGTGATTGAACTGCTACGGTTGCTTTCCCTATCCAGCATGAGGCGCCGTCGTCGGCGGTGATCAAATTTACCGGCCGCAAGCAGATGTCCCCGGTTGTGTTCTACGGTTCCCCGCAAGGTGTCCCGGTGAAGAAGCCGCTGAGCCTGTTGCGGTTGTTGTGGGAGATCCGAATTGATCTCAAGAAGCAAACTGATTTGGTCCCCAGGTCTCTGAACCTCTGATCTGTTCTTTTGTTCAAAGCAAATGAGCCCCATTTGTTCTGAATTTTGTTGGTTGGCTGTGCAGTGCCGGTGTTTGGGCAACCTTCCCTAGGCAAGAGGAGGCAATCAGGTTCTGTAAAGCACATGCGTATACCAATGTCTTTAGCTACCAAGATCATTTAACTGGGCAAAGAAGATTCCTCGTGTCTACGTACGATGAGTTCTGGAAAAGGTTGTGACCTTGTTACATTCGTGTCTCTGCATTTCTGACATACCTTGTTGATTCCTAATTTCCTTTTGTGTAATGGCCTGTTACTAGAGTTTGGAACATGTCACGCATTCTCATTGATGAAACTAGTCAAATTTCTTGCACAATTGTGCAGAATTATTTTAAACAGAATTATATTTTGTACATTCCCTTATCTCTATATATCCTTTTCTCTTTATCCCTTCCTTTTCTCATTTTCCCCTTATTCATGCAACTTTGTAACTTATCATTTCTATCAACGAAATGGCTATAAGGTAGAGCTGTCTCTACCTTCTTATGTGCTTCCTCCGTCCCAAAATATAAGAACCTAAGAGTGGATGAGTTATTTCCTAGTTTGTCCAGATACATTGTACTAGAAAACGTTTCATCCGATCCTAGATTCTTATATTTTGGGACGGATGTAGTAAAAAATGAAAATTCCATACAAATCTATCTCTATTTGTAAAAATATAATTGTAGCTATCCATCTATAATCTGGTCCTACCAGGTGTAGGTCTTTCTCTTTTTCCTCCAACTAACAAAATATTTTAATTTTTAACTAATTTCTAGCCTTGAGAGTGAACGTGGTGGTTCCTTTTAGCCCTCTCTTAATAATATAACATATTAGAATGTTCATCACTTCTTGGCTAATTTAAGATGCTTCTTTTCCTTCTATCTCCGTGGATTTATTCTGTTCTATGTTGTGACCTCCCTCTAGGTACAATAATATGGATCCGCAGATTCGCCATCACTATGAAGTTATACAGGATGTAAGTATCCATATCTGTATTTTGTTGAAATGGTAAAAATATTATATGCTGCCAAGTAGTAGTTGCATAAAAACGCTTTACATATTCTTGTTCTTTTTCCCAAACCTGATGGTAATGATGTGATGAAATATTTGGTAAAGCACATACTTGATACCGCAACTTCTCTTTTGACGGGGACTCTCCTTCTCTAAGGGCCTTAATTTTGGAATCATATCCATAGAATCCTGGCCTCAAATTTGCAAAAATATTTTCATGCATATCCTCTTAATCATTATTGTTTGGGAATTATTCTGTTACATCATGAAGATAGTGCTATCTTTTAGGATGAGGAATCAACCTGCATATAGTCGTACAAACAAATGTCTGAAAAACGGTCATACCCTAGATAGCCAATAACATGTTACATCAATTTTGATGCTACAGGGTTCACCTTGCCATATTTACTTTGATCTTGAGTTTGACCCAAGATTGAACAAGATGAGAGATGCAGATGAAATGGTGGATATATTGGTTGCAGTCACATTCAGTGCTTTGCATGATAAATATTCCATTGAAGGACAGGAGGAATGGATAATAGAGTTAGACTCGTCTACTGAAGGTGCCTTATTATCTCCTTTTGCATGTGTGTTTAACCTATAAAATTATGTCAATAAGATCAGTGGGATCATTTTATGATGAATAAGATTAGCCTTTGCGTATTCTGGATGGCTAGTTGCCTAATCCTACACAAGGATTTTTTTTCTATAATAGTCTAATACATTTGTACTGTAGGGCGTTTCTATGAATAATATGTTTTAAGTGGATGCTATGCATGATGAATGGAGACATTGTCTCCGTTGAGCCTAAGCAGTTCTCAAACTTCAGTCTTAAGGTAGGGTTATTCATAGAAGCTGAGGGATATCCAAGTTGAGAGGATAGGAAAAGGAATACTTACCATGTTGAACATAATCCATATTTGAATAAGTTTTAAGAGTTGTAGCAATTGTTCAAGAATTAGTTTGGCTTTTGTGCACTCTACATATGGATTTCATCCACAAGCTAATCCTACATGTGAGTGGGGGAGAATGAAAGGAAGTTACCTTTTTAGTTATCAGGAAGGATCTACTATGCGATCCCCATACCCTTTTTACATTATGTATTGGTCAATCTCAATCGTTGTGACAACCTTATATGCTGCATACTGGTACTCATATGAAAACTTCTGTTGTTTGCTTAGAAAAGTTCTCACGCCATTTGATCATCCGCATTCCGAAGACTGCATTCAAGGACAACTCCCATGTTGGTGCATTTATCTCTGAGGTACTATTCGATCTCAATCTTCAGTTTTATTATCATCAGTAGATTTGTTATTTTCAATCGCTCTATGTTTTGTTGAGCTAGTTATATTCAAGCAAGGAACAGTTCTAAGTCTATATCTTTCAGCAATGCTCCAAAATAAAGCATAGAAGAAAAATATGAATGAAAATGTTTTGTACCATTGATACATAGTATATGACCCTGACCCTGATAGTAGACACATGGAACATGCTCTCACCTACACTGAGAATAGGATCTAGTTACTCAGTGGAGCATGTTCACCTATTTAATAGTTTCTTTAACTCTTTAGTCTGTCTTCATCCTCCCCATGACGATGGACACAAGTTTTATGTGTTTATCCTCGAAGAGAATCCAGGCTTGCAACGAATCTATTCACTCCAAAATTGAATTTACTTTGTCTTCATACGTCAAGATTTTGAGAAAAAAAAATCAAAATGGAATAGGTCTATAGTACTCAGTAAGGCCCATATGAAACACAATGTATTTATGCTAATGAGTTGTTATCTTCTACACTAGAGGTGCTTTGAGCACTTGCACATTTCTGTATTGATGCCAAGTTACAAGTAAAGTAGGAACTTATCTTTGTTCTTGCCATACTTCTGGGCCTCCTGCGTTAGTCAATTCATCTTTTGGTAAAATGAAATGCAACTCTGAAATCAGAAAGAACCAGAATAAATTTCTTCTACTTTACAGGTGTGTACATCAACGCTGACTAGCAATTGATTTGCAATATACATGTTCTGCATATATGTTTGCCAACAAACCTAAGATGTGTATCCTTTTTTCTGGCCATGGGATTTATGTTCAGAACATTTGCCTTTTTTGCTTTGCCTGGTTCAATATAGAATCGACGTGGTTGATTGGAATTTTTTTTCTACACTGAAGTATTGCTCTTCTTTGCAGATCTGCTCACGGATTGCATCTCAGCGTGCAGCTAATCCTAACTTTGATAAACTGTACATTACGAAAGATAGCAGTTGTACAGGTCGTGCTGATCATCTCTTTATGGATACTGCTGTTTACTCCCGGAATCGTTGTTTTCGTTTAGCCTTCTCATCGAAGTCTGGGAAGAAGTCATTTCTTGTGGCTACTGAGCGTTTCAAACATAAAAACATGGTGAGACCTTGATCATAAGTTCTTTTCTTTGTTCTTGATAAATATTCCTAATGTCAAGTTCTTGATTTGACATGCCGACTTGTTTCTGTTCTTCAACTATATTAGAAAATTTAATTTCTTCTTGGAGATTTGATGTAAACACACGTCTCCTATTTCAAATGGTAGAACAATTTTTGGGGGACGGAGAATAATTGTAAGCCTGTAATAGTGATAAAAAGTTGATGGTTTATTGTTTCATGCCATGATGCTGAAATACAGAAATAGTGAAGATGCTCACTTAAAATCGTTGTTTCTTTCTTTTTAAACTTAAAAAGGCTGTTTTATATGGCCTTGCACCTGTCAAGTTTTCCTGAAATCAGTAAGAGAAGTACTCTACTAGTTGATCTGGTCCTCGCTAGTGTTGTATTTGTTGACACTTGTAAGCAACACCATTTCTGAAAAAAAAAACATGTGTCTACACAGTGCGAAAGTGATAGTTTTTTCATTTGCTTGTAAATCGGCTCTTTTTGGCATCCCAGTTCTGATAGACTACATAAATTTTGGACTGATGAACTGCCATCAATTTTATATCTATTCCAAGGAGGCTTTTTAGAAGAATATCACATTTGTTTTGATAGTCCACAATTGCCCTGTTTGTTTTTTCTTGAACAAGCCAGTTTATCAACAGCCTAGTTCAGGTAGCTGATTTAGTAGTTACTAGTTAGTACTGCTTGGTTTCCAGAACCTGATCCATTCTTGAAACCTTTTGATCCATCGGTTACCACAAAGGACTGTATCACAGATTGCCCTTTCGGTAGTAGGTCCTTGTATAATTTCTAAAATACAGTAGATGAATTTTAATTTAGATCTGCACTGTAGTTTGATATGCCTGCTGGTATGGCTAATCTGCTCAGTACAGCGATCCTAATACTTTATGTTATCTTTTCTGTGTTGTATGTCTTCTATCTTCTGTTGACTGCATGTGGACATGGAAGATTTTGTCTGAGGAGTTATGACATTTGGATATATGTCACCCCTGCACTCCGACAGCTTGTTTGCCTTAAAGGAGTTATGAGATTTGGATATATGTCCCTCCCTGCACTCTGACAGCTTGTTTTAAATGTTACAGAGTGGTAAGGAGCTCTTTATGGAGTCACTTATTTGCAGATTAGATGATGACTGTGATAAACTTTTGACATGCAAACTTGATTTAGATTGCAAGAAAACATTGCATTTTGACTCGGAAGCCAGCATGATACGAGTAAGTATATATGCTTTCTTGCATTACCTTGCAACTTTCCTGCTTGGGCATTTTCTGGAATACCCAAAATAAGTTTATTTTTCATCCATCCCACACATACCAATACAAAACCTAAAAGACTCTAATACCCCTACTCTATCAAATCCCAATGCAACTATTTATCACTTTATCTATTCCCAATATAATTATTCCCTATTTTCACAAACTTTGATGCAGGTTTTGATTGACGTATTTTTTGACCAGCTAGCTGTGTGGCTTAGAAGTTGCAATAAATGACTCATGCATTTTGAAGCTTCACTATTTCTGAATTTTGTATTGAAAATTTACAAATATATTGGTTGTTACAAAAGTGTCCTACATTTTGATCCTTCACTAATTCTGAATACTTTATTGAAAATTTACAAAATATTGGTTGTTACGAAAGTGTCCTATTGGGTAAATGTGTCACGTGCTTCTTATAACTCCTGTACCAAATATACTTAAATATTCTGTTGATTTTTTTTTATATTAATTGGTTGTCTAATGTGCTGTGGTTAGATTCAAGGAAGAAACAGCAAGGACTCCATTGGTACCTATCAAAATGATTTTCCTGTTTCAAATACTTATGGAATATCTCCTTTTCCAGCTCTGGATGTCTTTATTGAATCTATAGCTTCTTTTGGAAATGTCTCAGGTGGTTTATCTTCCTCTCAATTATCCCTCTTTCTTATTGATAATCAATCAATCATCAGGACTCTGTTTCACTATGTTTCTGTCGGACTTTCTGGAATTCGAAAGGGTGTATTTATGTGCATAGTCAGCTCAAATAGCTTGGTATGGGTCAAGTGGTTTGTTAAATTTTTGTGTGAAAAACATTAGTGAAGCCAGAGTAGTATATTCCATAAAATTCTTGAACTTTCCCTATCTCCACTTGATGCAGATACTACTCTACATTATCTAAAAAGGATGCCATTATTCATTATCTACCGAGGATCCCTCCACCATCAAAATTTGACTCTGCACATCAATACTGATGACTTTCTACCCTGCTCCAATTATGTTATTAGACAATATATTGTATTGATGTTATTTCTTGTAGTACTGTCATTACTTGCATTTTAGGCAAAAGATTAACAACGCTGCATCCCAGGAAATACGAGCTGCACACTTTCACTATATCTTAAAGATTTCTGCACCCATCTCTGCAGGAAAAATTAGATGCTGGTACTGGTTTTCACATTATGGTTTGATGATTTATAGTATGTCAAGGAGTAGATACTGTGAGCATATTGGAAGAGAACATAAAAGCAATCATGGTAACAATTTACCTTTGTTCTGTTCAATCTTCTTGTACATTAGTGCATTATTTCGTTAATGCTGATGGAAATTTTGTGAAATGAGTAGAAAAAAGAAGAGTTATGCTGATGGAAATTTTGTGAAATGAGTAGAAAAAAGAAGAGTTATATTTATGCTTCTACAGTCTTGTTATTATACCTACTTCACTATTTGCTCTTGCTATCACATGCTTTTGTTATTTCTTTATTCCTTGTCAGTATTTTTTTGTGAAAACACATGCACCGTATAGTGGTTTTTATCTTTTTTGTTTTCTTCTCTTATATCTTCTATTTAATGTTTGACACTTTATCTGGAAATGTTTTACATGTCCATTAAGCAAACCAATCTTGTGTTTTCTTACCTCACCTGTTTACTACGGTGCAAAATAGTTACGTATTGTAAGTTGATTTCATAATATCTCTATTTATTCGAACAGAATAACGCTGTGATAACAAAATTATAGCATATAGTTAGGGCCTGTTCACTTTGATGCCATTTTCAACCATACCATTTTTTGGGTAAAGTTGCCAAAATTTTGGCTTCGTTTAGTTTGTTGCCAAACTTTAGTAAGTACATATGAAATCTTGCTAAAATTTTGACAACCTTACCAAAATTTGGCAATGCCAAAACTTGGTAAGATTGAAAATGATAGCAAAGTGAACAAGCCCTTAATTTATGCTACCACGATATCCGAACCACTGACATGCAACCCCACTCCATGCCGTTCTATCGTTCGAATATATCATTGGTCCTATTCACATTTGCTAATCACTAGCCGTGCTTATGCAACAGTGATGTACATTGTTGAATTCCAGAGAGCTGCATATTACCAAAAGTGTTATGACCCTGACTGCCAAGGTAAGCACGGGACGATACTCCATAAGTCATCACTTATACATGATCCTTTTTTCTCTTATCATCATCACTTTGGAATAGGTTACCGTTCTCCATTGCGCCCTGTTCCCTGGGACGTGATTCCTGAGCTCAGCTCGATATCCGATTCAGCCCAGAGGGAATATCAGGGGGAAGTTGTGGAGATCAACATTGAGGGCAGCAACAGGAATGATGAGTACCTTTGCAATGGAACGAAATCAGTTACAGAGAGCGGTGAGGATGATCCTAGCTGGTGGGAAGAAGCGGTGAAATTTGCTGACAGCATCGAGAACACCGATCATGGTCCTGACACACGTGACCAAGTTGGTACTCTCTTCTGTTGTCTTCTTCTTCCCGCTAGTATTTCCAAACGTGCTATCATAGAAACTGCCATCCATGTATGCGCAGGAGGACAAGGATTGTGATGACGCAGACTGGTGGATGGACGCTGAAAGGATTATGGTGCAGATTGAGGAACAGATAGGGTCACAGAGCAACGCATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025664

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA025664&oldid=51258"