BGIOSGA025868

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Revision as of 06:35, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA025868| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA025868, complete gene.| tag = OJ1131_...")
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Gene Name

BGIOSGA025868

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025868, complete gene.

LocusTag

OJ1131_E05.116

Ensembl Transcript ID

BGIOSGA025868-TA

Ensembl Protein ID

BGIOSGA025868-PA

Length

5606

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:19111209..19116814

Sequence Coding Region

19111209..19112031,19114945..19115061,19115164..19115339,19115505..19115715,19115841..19116078
,19116253..19116403,19116506..19116814

Genome Context

<gbrowseImage1> name=IndicaChromosome07:19111209..19116814 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:19111209..19116814 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTTGTCCTCTTGCTCCTCCTCGCCGCCGCCGTCTCCTCGCCGGCGCCGGCGGCCGGAGACGGCGGGGGCGCCTTGCCGGTGCTCAACCCGATCTCCTCCTTCTGTAACACGACGGCGGCCAGGCGGACGTACCTGCCGAACAGCACGTTCGAGGCCAACCTCAACGGCCTCTTCGCCGTGCTGTCCAGGAACGCCTCGGCGTCGGGCTACGCGGCGGGGGCGTTCGGCGCGGCGCCGGACACGGCGTACGGCCTCTTGCTCTGCCGCGGCGACTTCACCGGGAACGACTGCTCCGCCGCGCGGCTGGCGTCGTCGTTCCAGCAGGCGGCGAGCAGCTGCTTGTACAGCAAGGACGTCGCCGTCTACTACGACCAGTACCAGCTCCGGTACTCGGACCAGGACTTCCTCGCCGGCGCCGGCGCCGGCGCCGCCAACGAGCCGGAGACGGCCGCGTTCAACATGAACAACGTCTCCGACGCGGGCGACGTCGCGGCGTTCGACGCGCTGGTGGCGGAGCTGGTGAACGCGGTGGCCGACAGGGCGAGCAACGCGACCAGGAGGTACGCCGCGGGGAAGGCCGGGTTCGCACCGGAGGCGATGACCGTGTACGCCATCGCGCAGTGCACGCCGGACCTGTCGCCGCCGCAGTGCCGGGGCTGCCTTGCCGGCATCATCGACCAGATGCCCAAGTGGTTCAGCGGCCGCGTCGGCGGCAGGATCCTCGGCGTGCGCTGCGACTTCAGGTACGAGAAGGATCCATTCTTCAAGATCCCCAACGACATGGTGGTGCTTAGCCCGCTCCCGGATCCGTCGTCACAAGGGAGCAGCAGCAGCAGCAGCGGTGGCCTGTGGATCGTGGCGATCGTCGTCCCCGTCGCCGTGCTCCTCCTCGGCTTCTTGGGATGTTTCCTGTGGATCAGGAGGCGAAGAAGGAGAGGGACGGTGAGCGTGCCGACCATGTCCATGGAGATGGAGCAGGTGCTCAAGCTGTGGCGGATCGAGGAGAGCGGCTCCGAGTTCTCGCTCTACGACTTCGACCAGATCGCCGACGCCACCGACAACTTCTCCGACGCCTGCAAGCTCGGCCAGGGCGGCTTCGGCCCTGTCTACAAGGGTCAATTGCCTGATGGGCTTGAGATAGCGATCAAGAGGCTCTCATCCTGTTCAGTGCAGGGGCTGATGGAATTCAAGACAGAGATCCAGCTGATAGCCAAGCTGCAGCACACCAACCTGGTCAGGCTGCTGGGCTGCTGCGTCCAGGCTGACGAGAAGATGCTCATCTACGAGTACATGCACAACAAGAGCCTGGATTGCTTCATCTTTGACACTGAAAAGGGGGCGATGCTGAACTGGGACAAACGCTTCCGTATAATCGATGGCATTGCCCAGGGGCTTCTTTACCTGCACAAGCATTCTCGATTGCGAGTTATACATAGGGATCTGAAAGCAAGCAACATACTCCTCGACCGGGAGATGAACCCCAAAATCTCGGATTTTGGCATGGCAAGGATATTCTGCTCGAATGTGACCGAAGCCAACACGACCAGGGTTGTGGGCACACATGGGTACATCGCTCCGGAGTATGCTTCCGAGGGCCTCTTCTCGATCAAATCAGACGTGTTCAGCTTCGGTGTCCTGCTTCTCGAGATCATAAGCGGGAAGAGGACCGCCGGATTCTACCAGTACGGCAAATTCTTCAACCTCACAGGCTACGCGTACCAGCTATGGCAAGAGGGGCAATGGCACGAGCTGGTGGACCAGGCGCTGGGGGAGGACTTCCCGGCGATGGAGGTGATGAAGTGCGTGCAGGTGGCGCTGCTGTGCGTCCAGGACAGCGCCGACGACCGGCCGAACATGTCCGACGTGATCGCCATGCTCGGCAGCGAGGGGCTGACGTTGCCGGAGCCGAGGCAGCCGGCGTACTTCAACGTCAGGATCTCCAGCCTGGCCGTGTCGTCCAGCTCCTTCGGCGAGTCGTACTGCATGGGCAACGTCACGTTGATAGAGGAGGAAGGCAGATAG</cdnaseq>

Protein Sequence

<aaseq>MLVLLLLLAAAVSSPAPAAGDGGGALPVLNPISSFCNTTAARRTYLPNSTFEANLNGLFAVLSRNASASGYAAGAFGAAPDTAYGLLLCRGDFTGNDCSAARLASSFQQAASSCLYSKDVAVYYDQYQLRYSDQDFLAGAGAGAANEPETAAFNMNNVSDAGDVAAFDALVAELVNAVADRASNATRRYAAGKAGFAPEAMTVYAIAQCTPDLSPPQCRGCLAGIIDQMPKWFSGRVGGRILGVRCDFRYEKDPFFKIPNDMVVLSPLPDPSSQGSSSSSSGGLWIVAIVVPVAVLLLGFLGCFLWIRRRRRRGTVSVPTMSMEMEQVLKLWRIEESGSEFSLYDFDQIADATDNFSDACKLGQGGFGPVYKGQLPDGLEIAIKRLSSCSVQGLMEFKTEIQLIAKLQHTNLVRLLGCCVQADEKMLIYEYMHNKSLDCFIFDTEKGAMLNWDKRFRIIDGIAQGLLYLHKHSRLRVIHRDLKASNILLDREMNPKISDFGMARIFCSNVTEANTTRVVGTHGYIAPEYASEGLFSIKSDVFSFGVLLLEIISGKRTAGFYQYGKFFNLTGYAYQLWQEGQWHELVDQALGEDFPAMEVMKCVQVALLCVQDSADDRPNMSDVIAMLGSEGLTLPEPRQPAYFNVRISSLAVSSSSFGESYCMGNVTLIEEEGR</aaseq>

Gene Sequence

<dnaseqindica>1..823#3737..3853#3956..4131#4297..4507#4633..4870#5045..5195#5298..5606#ATGCTTGTCCTCTTGCTCCTCCTCGCCGCCGCCGTCTCCTCGCCGGCGCCGGCGGCCGGAGACGGCGGGGGCGCCTTGCCGGTGCTCAACCCGATCTCCTCCTTCTGTAACACGACGGCGGCCAGGCGGACGTACCTGCCGAACAGCACGTTCGAGGCCAACCTCAACGGCCTCTTCGCCGTGCTGTCCAGGAACGCCTCGGCGTCGGGCTACGCGGCGGGGGCGTTCGGCGCGGCGCCGGACACGGCGTACGGCCTCTTGCTCTGCCGCGGCGACTTCACCGGGAACGACTGCTCCGCCGCGCGGCTGGCGTCGTCGTTCCAGCAGGCGGCGAGCAGCTGCTTGTACAGCAAGGACGTCGCCGTCTACTACGACCAGTACCAGCTCCGGTACTCGGACCAGGACTTCCTCGCCGGCGCCGGCGCCGGCGCCGCCAACGAGCCGGAGACGGCCGCGTTCAACATGAACAACGTCTCCGACGCGGGCGACGTCGCGGCGTTCGACGCGCTGGTGGCGGAGCTGGTGAACGCGGTGGCCGACAGGGCGAGCAACGCGACCAGGAGGTACGCCGCGGGGAAGGCCGGGTTCGCACCGGAGGCGATGACCGTGTACGCCATCGCGCAGTGCACGCCGGACCTGTCGCCGCCGCAGTGCCGGGGCTGCCTTGCCGGCATCATCGACCAGATGCCCAAGTGGTTCAGCGGCCGCGTCGGCGGCAGGATCCTCGGCGTGCGCTGCGACTTCAGGTACGAGAAGGATCCATTCTTCAAGATCCCCAACGACATGGTGGTGCTTAGCCCGCTCCCGGATCCGTCGTCACAAGGTTAGTCCTAAATTAAATCCTCTCACAAATTTTGAAATTTGATGCATTCGGTTTAAATTTAGAGATGAATTCATTCCCCCAGTTCATCGATCATATCAATGGACTTCTAGTAGTCTTGTTTTTGTTTTTCTTTTTTAACCCTCAATTCAATTTTCAAGGCCTCACTGCCGTTACCAGTTAGCTAGTATCAATTGCTTGCTCCTTTGATTTGTACAGGGCATTTGCATTTTCTGAAATGGGATGGAGTTATTTGATTTCACAAACTATATATATGCTTTCCTCCTCTGTAAATTAATTGATGGTTTAGTAGTGTTGAGTTCTCACGTGAGTAGCTAGTATGTTTTTCCTTTAAATTATAAGTAGTATGTAGTGTGTTGATTTCATATGCTTGATTAGTTTTTGTTGAATGGGAACATCGTTGAATTTTTGTAAGCTAAACTATATCCATATTACTTTAAAGGGCATTAATTATCTAAGCAACAGATCTATACAGACAGTGATTACATTTTGCAAAGTTTATTATTTTCCTTATTAGGGAGGAACATTGTGTATACTCGTGTTAAACGAGAAGATGTTGTGATGATTATATGAAACAGCATTTTTCTTTTCTATGATGCATAACGGTTCGTTAATTCTTGATCATATGATTAAGGGAATTAGGTTCCAACTTAATTAAATAATTTGGTGCATCAATATCGTTGTTCATCTAGGTATACTACACTACACAATAGCTAATCAACAACTTGTATGCTAAATTAATGGTCAAATTTGTAAGCCAAGGATGAAAAAAACGCTACTTCAACAACTTTTCTTAAGTTTGCAGGGTATAGGACATAATACATGGACAAAATATATACTGTCAGAAATGTCAACAAATTTTCCATACCCAACTTGATAAATCAATCAGTATAATAAATAACACAACCTTCTATTGAGTTTAACAAAATTCACACACTTGGGGGGAAAAATGCTTTGTGTCAATGCACAATGCTTGCATCATTTGTTATGCGTGCTTATCTTAAAGTAGGACCCGCTTGACTTTCCTGTCCATAAAAAGAATTCCCCAATCCACATCAGCCTATAGGAGCGAATTGTTTGCTGGCCACGAGTATTAGTTCCGGCTGCAAATATATTCTACGACCCGGAGCCGTGGCAGCTGATCGATCAAAGTCTTGCCTTTCAAGATCTGAGAAAAAGAAAAGGGTTCTAAAATGATGTCAAATGGATGATCGAATCGACCATCAAATTTCCTCAATCCAAACACCTTTTGTGTTTATTAGTTTATTAAACTCTTGGAGAATACCCATTGCCCAATCCAGAGTCCAGACACTTGGGTAGGGCCATTTTTTTTTCTGATATTTTAATATCTCCGTCTTGCTCATTGTTTTACCCTCTCGGTGTGCTCCTGTCCCCTTCTCCACAAGAAAAATATTCCATCTTGTAGAGCTTTCCCATGTGAAGAGGAATCGATCGAGCGTACGGGGTCCAGGAAATGCAGGGAAAAATTGCTTTTTAATTTATTTTTATGGAACAGGAGATCTGGGCGTCTCGATCACATGATTGATGTAGTTTGTTTTTGACTAGATGGGGCGCCGTGAGCAGCGGTGTCCATTTCTCTTCCCAATCAAACGTGTGTTCTGTTCCATCTCAAGAACATGAACGTGCATGCCCCCTGCTGGATTGTTCAGAAATCCGCCACGAGATGGGCTGCTAGCTACTCCTTCCGTTTCACAGTATAAATCATTCTAACATTTCTCATATTCATATGAACGTGAAAAATATTAAAATGACTTACATTGTGAAACGGATGAAGTAGCCAGCAACGAGATTTGTATAGTTCGTTTGGGCAGCTGGGCGTAGTGAGACGGTCATAGGGAGAGTTCAGCTCACACTAATCTTCCTGTGGCCGACACAGCTATGGGCGTCCGTGTCGGATGCATGGTTAACTATGAATATAGTAGTATTGGTTTTGTTAACCCTTTTTTAGCTTTGTTCTTTTCACACGATCGATCTCTTGCCCCTCGTAGGCAGCTACTAGTAGTGATGTTCCAGCGACACACGAAAGCGAATCCACGTGCGTCACTCGATGCTACTGCCAAGTACGGAGCACTGCAAACAAGCTGGTCTTGCAGTAGAATATCTCCGCCGATTTGTTGAATTCGATTCCCCTTTCTCCCTGCACTTTCCACGGTCGGTCGCTGACACCGCCCTCCCTGCATTTGCACAGCGCACAGCCATGGTCCTCCCCCATGCCTCCAGATACCAGATGCATCTGCCTAGTGCGCGTGCACGTTTGTACTATCCGACAGGAGAGAATTTGTTCCTCTGTACGTATAGTGCGGCAGTTGCAGTAGTAGTTCGTTTGCTGCTTTGCTTAATTTGCTGTGAAGTTGCTTGCCATGATATTCGTTTCCATGGAATGTCACGTCGCGTCGTCCGACGACGGCGACCTCCCGTCGGATATTTAGCCGGCGGAAAGAGAAAGACCCACGCGCGGTGTTTGACGAACCCCCTTCCCTTCTCTCGGTCGTCGTCGCCTTCGTCGTCCACTACCGTCCAGCCAACCACGGTTTCGCCTTTTGCCATTTGGGACTACCGGAGCAGTCCCTACCGCCCAAAACCGATGGTGATGCTCATCATCAGCAGCATCATCCGTGCTACGAACCTGCGTCGCATGCGCCTACGTAGTTGTCATCTCATCGTTGTCGAAATCGAGAATAATGTCACATCACACGTTCATCGATCGTTTTCCACCTTTTGCGACTAGTCGGGATTTCCAGTTAGACAGAACCGAATCAAACTCTGGTGATGAAAACCTTGTAGTGGTACAGGAAAAAACGCATGCATGATCGTAGCATTGGAAAGTTGGGACATGGATCTGACAGTGGCAGTTTCTGCAACGTTTGCACGCAGGGAGCAGCAGCAGCAGCAGCGGTGGCCTGTGGATCGTGGCGATCGTCGTCCCCGTCGCCGTGCTCCTCCTCGGCTTCTTGGGATGTTTCCTGTGGATCAGGAGGCGAAGAAGGAGAGGTGCGCACGGACCATCGCTGACACCTGTTCGCGCTCATGCTTCACTGCCGGTTAACTGTAGGTTTCACTAACTGTCAGCTGAATCAGTGATCAACATGGCAGGGACGGTGAGCGTGCCGACCATGTCCATGGAGATGGAGCAGGTGCTCAAGCTGTGGCGGATCGAGGAGAGCGGCTCCGAGTTCTCGCTCTACGACTTCGACCAGATCGCCGACGCCACCGACAACTTCTCCGACGCCTGCAAGCTCGGCCAGGGCGGCTTCGGCCCTGTCTACAAGGTAAGCACAGCTCCTCCATTCATGCTTGCATTCTGATGCAGAGTTGCAGACACACTGATCGACTCTTCAGTGTCATCTGCAAAATGCTGCACTAACTGATATGTTTCTTCAGTATTCACTATTCAGTTAATCTGATTTGAATTTTGTTTTACTTATATGTTTCAGGGTCAATTGCCTGATGGGCTTGAGATAGCGATCAAGAGGCTCTCATCCTGTTCAGTGCAGGGGCTGATGGAATTCAAGACAGAGATCCAGCTGATAGCCAAGCTGCAGCACACCAACCTGGTCAGGCTGCTGGGCTGCTGCGTCCAGGCTGACGAGAAGATGCTCATCTACGAGTACATGCACAACAAGAGCCTGGATTGCTTCATCTTTGGTACATCACTCACATATCCATCTCGATCAAAAGCTTTCAACATCTCTGTCCATTTTCCAAAATCTTTGTGAAAACCTGCTGAATGTTGCTGATGCTTTTGTCTTGCCTGGCATTTTGATATGCAGACACTGAAAAGGGGGCGATGCTGAACTGGGACAAACGCTTCCGTATAATCGATGGCATTGCCCAGGGGCTTCTTTACCTGCACAAGCATTCTCGATTGCGAGTTATACATAGGGATCTGAAAGCAAGCAACATACTCCTCGACCGGGAGATGAACCCCAAAATCTCGGATTTTGGCATGGCAAGGATATTCTGCTCGAATGTGACCGAAGCCAACACGACCAGGGTTGTGGGCACACAGTAAGTACTAATCACTGATGATGGTTAAGTTACAGTAAGTACTAATCACTGATGATGGTTAAGTTACAGCACATGTGTTTTTGTTGTGTAAGAAAAGAAGAAAATTCAGTCTTAGTCTGATGCAATGGTGATGTTATGACTTATGACTGAATTCTGATATACTTTCTTTTTCAGTGGGTACATCGCTCCGGAGTATGCTTCCGAGGGCCTCTTCTCGATCAAATCAGACGTGTTCAGCTTCGGTGTCCTGCTTCTCGAGATCATAAGCGGGAAGAGGACCGCCGGATTCTACCAGTACGGCAAATTCTTCAACCTCACAGGCTACGTAAGCACAAATAATCCCTGACAACCAAAATTCACAAATTCTCCAGGAGTGCAGGGTGTGTGCTGATCAGTGATCACTGAATATTTCTGAACTTCTTTTCAGGCGTACCAGCTATGGCAAGAGGGGCAATGGCACGAGCTGGTGGACCAGGCGCTGGGGGAGGACTTCCCGGCGATGGAGGTGATGAAGTGCGTGCAGGTGGCGCTGCTGTGCGTCCAGGACAGCGCCGACGACCGGCCGAACATGTCCGACGTGATCGCCATGCTCGGCAGCGAGGGGCTGACGTTGCCGGAGCCGAGGCAGCCGGCGTACTTCAACGTCAGGATCTCCAGCCTGGCCGTGTCGTCCAGCTCCTTCGGCGAGTCGTACTGCATGGGCAACGTCACGTTGATAGAGGAGGAAGGCAGATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025868