BGIOSGA025946

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Revision as of 06:36, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA025946| Description = BGIOSGA025946| Definition = Oryza sativa Indica Group BGIOSGA025946, complete gene.| tag = | tid = BGIOSGA025946-TA|...")
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Gene Name

BGIOSGA025946

Description

BGIOSGA025946

Definition

Oryza sativa Indica Group BGIOSGA025946, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA025946-TA

Ensembl Protein ID

BGIOSGA025946-PA

Length

3636

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:20554625..20558260

Sequence Coding Region

20554625..20555003,20556697..20556819,20556917..20557017,20557160..20557232,20557729..20557826
,20558063..20558260

Genome Context

<gbrowseImage1> name=IndicaChromosome07:20554625..20558260 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:20554625..20558260 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGAGGAGCAGTCCAAGGCCCAGGCGGGGGCGAAGGCCCTGTCGGAGCCGGTGCGGGTCGGGGGGTCCGCGGCGGAGGCCACGCTCTCCGGCGGGGAGCTGGCGTGGCGCCCCACGGGAGGCGGCGGGGGAGGAGGGGAGGCGGGGAGGCTGGAGCTGGAGTCCGAGGTGCTCGGGGTCCGGGTGGACGGGAGGGCGCTCAGGGTCGCGACCTTCGCGAGGGGCGACGACGCGGCGGCGGCGGCGGCGCGACCGGCGACGTGCGGGGGCGGGGAGAGGAGGAGGGAGAGGGAGAGGGAGGTGGTGGTGGAGATGGAGAGCGAGGAGGCCGCCGCGGCGTGGGGGGACGCCATGAGAGATCGCCTCGCCTCGCTTGGTCGGCCAAAGAGATTGTTCATCATAGTTAACCCTTATGGTGGAAAGAGAGGTGGGCGGAAGATTTTCCAGACTGAGGTCCTACCTCTCATTGAAGCTGCTGGCATCCTTTACACCATGCAAGAAACCAAGCATCGGCTTCACGCTCAAGAAATTGCTCATTCACTGGATCTTAGGAAATATGATGGAATTGTTTGCGTCAGTGGAGATGGTGTACTTGTAGAGGTGGTTAATGGTCTGCTGCAAAGAGAGGACTGGAACACAGCAATAAAAATACCATTAGGCATCATCCCGGCAGCCATAATCAAGGACTGCCNTAGGTCGGCTCTTGCTGGGCTGATGTTTCAGATGAAGGATGGCAGCTATGTCAAATCCCCCTATGTGGAGTACTTCAAGGTGAAGGCTCTCAGGATTGAGCCGGGAATGCGGGTGGGCAGCACCACCAAGGGCGGCATCATCGACTCCGATGGCGAGGTGATCGCGAGAGGGGATGGATCACACACCGGCGACGAGATAGAGCACCTGATGGCCTATGGCCCTCCCATCCAACTGACGGTGGATCAGGGCTTGGCCACCATTTTCTCCCCTAGATGA</cdnaseq>

Protein Sequence

<aaseq>MAEEQSKAQAGAKALSEPVRVGGSAAEATLSGGELAWRPTGGGGGGGEAGRLELESEVLGVRVDGRALRVATFARGDDAAAAAARPATCGGGERRREREREVVVEMESEEAAAAWGDAMRDRLASLGRPKRLFIIVNPYGGKRGGRKIFQTEVLPLIEAAGILYTMQETKHRLHAQEIAHSLDLRKYDGIVCVSGDGVLVEVVNGLLQREDWNTAIKIPLGIIPAAIIKDCXRSALAGLMFQMKDGSYVKSPYVEYFKVKALRIEPGMRVGSTTKGGIIDSDGEVIARGDGSHTGDEIEHLMAYGPPIQLTVDQGLATIFSPR</aaseq>

Gene Sequence

<dnaseqindica>1..379#2073..2195#2293..2393#2536..2608#3105..3202#3439..3636#ATGGCGGAGGAGCAGTCCAAGGCCCAGGCGGGGGCGAAGGCCCTGTCGGAGCCGGTGCGGGTCGGGGGGTCCGCGGCGGAGGCCACGCTCTCCGGCGGGGAGCTGGCGTGGCGCCCCACGGGAGGCGGCGGGGGAGGAGGGGAGGCGGGGAGGCTGGAGCTGGAGTCCGAGGTGCTCGGGGTCCGGGTGGACGGGAGGGCGCTCAGGGTCGCGACCTTCGCGAGGGGCGACGACGCGGCGGCGGCGGCGGCGCGACCGGCGACGTGCGGGGGCGGGGAGAGGAGGAGGGAGAGGGAGAGGGAGGTGGTGGTGGAGATGGAGAGCGAGGAGGCCGCCGCGGCGTGGGGGGACGCCATGAGAGATCGCCTCGCCTCGCTTGGTAAATTCACTGATTAATCACTAGTAGTAGTAGTAACTCGGTAATCATCTGCTCTTGATTTGTTCTTAGTAACAGAAATGTCTACTGTTCGATGATCTTTAAGCTTGTTTAGGTTATTGTTTGATTCATGGTGTGATTTGGTCACGAAATGTCGCCTTTTTTATTGGGATTGGTCTTTGATCAATTGGGCGGTGGTTGCGTTGACTCAGTCGGAGACTCGGAGTAACGTAGTGGGGAAAGAACCCCCAAATATCGATTATTCACTTTGTTTAGTTGATCACCTTCATAAACAAAAACTTAATGTAATGAGTTTTTACAATCGACGGGAGGGATGTACAGTACTGCATCTCTCTGGATATTTCTTGGTGTCCGTGCTGTTGTAACGTGGCCTGTCAGCTCTGTTGCACAAATTTGTCCAAATCGTCAATTGTACAGTACTACTTTATATGTACGGATAGCGTACAATACTTCCAATAGGGAGTTCTTTTTACCCCATTGTTTCTTCAAGTTTCACTGACCATAGATCAACTTTTACTAGATAGTTTAAATTGTGTATGAGTTTTTGTTTTTTTAAAATATATTTTGAATCAAATGGACCAGCTCCTGGTGGCATAACAAAGATTGTGGTGTTTGAACTTGAAATTTCAGCCAGGTCCAAGAATCATACCATCTGATATCCTGATGAGCTCTTTTCATCTGCTGCTGATTAATGTAGGAGAAGATATTTTTTGTAATGATCATTTGGATACTTCATTGATTTTCATGTGTTGGTCAAATGTCCTTCTCAGTGTCGCTATTGCTATTAAATGTCACCCTTGTGTATTTCATTAGACTTCAATAAAAAAATGAAGGTGGTTTTTATGTTTTCACTTTTCCACCCATTAGTTTATTATAGGATTGTTATAGGACTTCAAGCATTTTGCTTCTACTGCTCTCACGCACACAATGTAATTCTATCCTATCTCTAAGCATTGTTCTTCTGCACTCACACCAACCGTGTCTTATGCATACTTGAAGCAGAGACAATGACCCTCTCTTTGGAATTGGGTTTTTTGCTGGCAAAGTTGGATTGAATTCTTCGCTTGCCACGGTTGGCAGGCTGTTATTTCCTGGCAACATTCATATGTCCCAAAATCCAGAATAACAGTCTGTTGGTAATTGTAATGCAAATAATACCAAGGAAGAAGGAATAGAATTTGCCCCCCTTTTTTTAGATAATAGGAATCCCGCATGGTTGGAGTGATTATATACACCTGTTGGAATTTGTGAAGGAGTGAAATGTAGCCCTTTTTGTCAGCACTAGGTAGTCCATCCAGGTCTTCAGGAGGTGTTCTGTTGCATCAAAGAAGATGTTGAACTTAGACAGAAGGTCCTAACTCTCCTAAAAGTTAGTTTCTTTGGTTTGTCATGTTTGCTCCAGTTGTTGATTTCCTTCTGGTAGTAAATTCTTTTTTCCCTGAATCTATCCTGGACATCCTCCATAAATTTCCAGAGCCCCACTATTAGTGTTTTTTTAGGAAAAAAAGGAAAAAGAACGTGTCATCTCTAATTTGTTCTTCTTCATGCATATGGAGACAACTATTTAGGGTATTGACACTGCAACTAAAGCTGGACTTCTAATTATTCTTGACATGCTGGACTTCTAATTATTCTTGACATCTATCTTATTCTACCGTGATATGCTGTTGAATAGGTCGGCCAAAGAGATTGTTCATCATAGTTAACCCTTATGGTGGAAAGAGAGGTGGGCGGAAGATTTTCCAGACTGAGGTCCTACCTCTCATTGAAGCTGCTGGCATCCTTTACACCATGCAAGGTTGTGATATCTGTTCAAAATCTTCCTATTTTGGTAATCTAAGTGTGACACCCAGTTTCTCTGTATACAAAGTTTCTGAATTATGAATTGTGTTCAGAAACCAAGCATCGGCTTCACGCTCAAGAAATTGCTCATTCACTGGATCTTAGGAAATATGATGGAATTGTTTGCGTCAGTGGAGATGGTGTACTTGTAGAGGTTAGCAAAAAAAGATGATTCGTACAAAAACCTGATGCGAATTATAGGCAGTAGTCTTCTTTATCCTCAGATATTTTTAGAGAAGGGTGAATTTCCTTTATTCTTCTTACTTGCATTTAATTATTTTATTTTGGGTTTTTAGGTGGTTAATGGTCTGCTGCAAAGAGAGGACTGGAACACAGCAATAAAAATACCATTAGGCATCATCCCGGCAGGTATTTGAATATGTGATCACAATTCACAATGCTATTCTTTATTGTAGTGATGCAAAGTTACACCTAGGAGATCTGTAATATGCCTTAGGTTTGTTCTTTCTGATCACTGCAGAACATCATAAAGTTGTGTTACACTAGAGAGTAGCTTGTGATTTCTTATTTATTTTGTTCAGCCTTGTGTAGCTTCTTTACAGCTCAATACTATAAGTTCTCTGGGTAGAGTTTTCACCCATTACAAATACCATAGGTACCGGAAATGGAATGGTGCAATCACTTGTGCATTTTGCTGGTGAATCCTTCTCTGTTTATAACGCTGTGCTTGCAATTATCAGAGGCAAGTCTCTACCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCTTCATTACATTGCAGTTTGGAGATGGCTACTTGGATGTAGCCATAATCAAGGACTGCCNTAGGTCGGCTCTTGCTGGGCTGATGTTTCAGATGAAGGATGGCAGCTATGTCAAATCCCCCTATGTGGAGTACTTCAAGGTACTGTGTTTACTTACCCCTCTGTTTCCTGACCACTCCATCTCTGTTCCTCAGTGTAAAAGAAAATGCCATGCTATCCACCGAGACATTTTTTTTAGATAATGGAAATGGTTTATATCTTCGGCCTCTGCAGTTTCACACAGCAAAATCAACCGAGATAATGCCATTCAATCGTTTGATTCCGTGTCACTTTCTCCTTTTTTTTCTTTCTCAACCCAATGTAAAATCTCTGACAGGTGAAGGCTCTCAGGATTGAGCCGGGAATGCGGGTGGGCAGCACCACCAAGGGCGGCATCATCGACTCCGATGGCGAGGTGATCGCGAGAGGGGATGGATCACACACCGGCGACGAGATAGAGCACCTGATGGCCTATGGCCCTCCCATCCAACTGACGGTGGATCAGGGCTTGGCCACCATTTTCTCCCCTAGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025946