BGIOSGA025961

From RiceWiki
Revision as of 06:37, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA025961| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA025961, complete gene.| tag = OS07G05...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA025961

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025961, complete gene.

LocusTag

OS07G0567000

Ensembl Transcript ID

BGIOSGA025961-TA

Ensembl Protein ID

BGIOSGA025961-PA

Length

3294

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:20819638..20822931

Sequence Coding Region

20819638..20820267,20822026..20822391,20822746..20822931

Genome Context

<gbrowseImage1> name=IndicaChromosome07:20819638..20822931 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:20819638..20822931 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTACGACCTCCCCGCCAAGTTCACCTACGGCGTCGTCCGCAGCTACATGGCGGCGCGCGCCCGGGCGGGGGCGGCGGGCGCGGCATCGGCGATTCCCGACGACGAGCTGCGGTACCCGGGGCACCAGCACTCGGCGGAGTGGTGGCTCTTCAAGGACCTCAGGCGCCGCGGGCCACGCGACCGCCCCGTCGCCCGCGTCGACGACCCGGCCGACGCCGACCTCTTCTACGTGCCGTTCTTCTCCTCCCTCAGCCTCGTCGTCAACCCGATCCGCCCATCGGCGGCCGCCGCCAATGCGTCCGACGCGGCGGAGCCCGCGTACAGCGACGAGTCCACGCAGGAGGAGCTGCTGGTGTGGCTGGAGCGGCAGCCGTACTGGCGACGGCACCAGGGGAGGGATCACGTGTTCATCTGCCAGGATCCGAACGCGCTCTACAGGGTGGTGGATCGGATCAGCAATGCTGTGCTCCTGATCTCCGACTTCGGGCGGTTGCGTAGTGAGCAAGCATCTCTCGTCAAGGATGTTATCCTGCCCTACGCGCACCGAATCAACTCCTTCCAAGGCGACGTGGGAGTCGAAAGCCGGCCTTCATTGCTATTCTTCATGGGCAACCGGTATCGAAAGGAGGGTGGGAAGGTGCGTGATACGCTGTTTCAAGTTCTTGAAAATGAGGCAGATGTAATCATAAAACATGGAGCCCAGTCAAGGGAGAGTAGGCGTATGGCTACACGAGGAATGCACTCATCCAAATTCTGCCTCCATCCTGCTGGAGATACTCCCTCGGCATGCAGATTGTTTGATGCGCTTGTCAGTTTATGTGTTCCTGTTATAGTCAGCGATTACATTGAATTACCATTTGAAGATGTTATAGATTACAGAAACATATCAATATTTGTTGAGACAAGCAAGGCTGTACAGCCTGGATTTTTAACATCAACACTTCGAGGAATCAGTTCACAGAGGATTCTAGAGTACCAGAGAGAAATAAAAAAGGTAAAACATTATTTTGAGTATGAAGATCCAAACGGACCAGTGAATCAGATATGGCACCAAGTTTCTTCAAAGGCACCATTGATCAAGCTGTTGATTAACCGCGATAAACGCCTAGTTGAAAGAGGTACCAATGGAACAGATTGCTCGTGCATCTGTTCGACCACGAAGGAACTTCTACGTAAATAA</cdnaseq>

Protein Sequence

<aaseq>MYDLPAKFTYGVVRSYMAARARAGAAGAASAIPDDELRYPGHQHSAEWWLFKDLRRRGPRDRPVARVDDPADADLFYVPFFSSLSLVVNPIRPSAAAANASDAAEPAYSDESTQEELLVWLERQPYWRRHQGRDHVFICQDPNALYRVVDRISNAVLLISDFGRLRSEQASLVKDVILPYAHRINSFQGDVGVESRPSLLFFMGNRYRKEGGKVRDTLFQVLENEADVIIKHGAQSRESRRMATRGMHSSKFCLHPAGDTPSACRLFDALVSLCVPVIVSDYIELPFEDVIDYRNISIFVETSKAVQPGFLTSTLRGISSQRILEYQREIKKVKHYFEYEDPNGPVNQIWHQVSSKAPLIKLLINRDKRLVERGTNGTDCSCICSTTKELLRK</aaseq>

Gene Sequence

<dnaseqindica>1..630#2389..2754#3109..3294#ATGTACGACCTCCCCGCCAAGTTCACCTACGGCGTCGTCCGCAGCTACATGGCGGCGCGCGCCCGGGCGGGGGCGGCGGGCGCGGCATCGGCGATTCCCGACGACGAGCTGCGGTACCCGGGGCACCAGCACTCGGCGGAGTGGTGGCTCTTCAAGGACCTCAGGCGCCGCGGGCCACGCGACCGCCCCGTCGCCCGCGTCGACGACCCGGCCGACGCCGACCTCTTCTACGTGCCGTTCTTCTCCTCCCTCAGCCTCGTCGTCAACCCGATCCGCCCATCGGCGGCCGCCGCCAATGCGTCCGACGCGGCGGAGCCCGCGTACAGCGACGAGTCCACGCAGGAGGAGCTGCTGGTGTGGCTGGAGCGGCAGCCGTACTGGCGACGGCACCAGGGGAGGGATCACGTGTTCATCTGCCAGGATCCGAACGCGCTCTACAGGGTGGTGGATCGGATCAGCAATGCTGTGCTCCTGATCTCCGACTTCGGGCGGTTGCGTAGTGAGCAAGCATCTCTCGTCAAGGATGTTATCCTGCCCTACGCGCACCGAATCAACTCCTTCCAAGGCGACGTGGGAGTCGAAAGCCGGCCTTCATTGCTATTCTTCATGGGCAACCGGTATCGAAAGGAGGTGAAATTCTTAAATCTTGGGAGAAATGTGATGGCTTGATCAATTAATTTGCATTGTACCTATCATAGAGCATCTGCATTTTCAGAAGGGATATTGTATGCTATAGAGTAGAGAGTGAATTTTTTTGCCATATCCTAGATAACATTAGCATTGAATTTTATTGGTGGTTATATGATTTTCCAGAGCACTCCAAAATCATGTTAACTTTATGTCTTAAGTTGATGGTTCTGTCTGAGAATTTTTAGGCAATCAGAAAAAAAATGAAGCTTAATATGCCATTAGCTCATTATATATTTTTTGTTACCATGTGCCTTTGATTTAGCTTGTTTAGATGAGTTTTCTTACATATATTATAAATAGGAAACTATCACAAATGTATCATGTGCAAACACATTACTCGATATGAGATGATTATTAAAAAAGGTGTGATTGATTTTTCAGTTTTTACATGCCTCCTTCTTTAGCGAACTTTTGGTTCTGGATATATCTGTTGACTGGTCAACAACCTTTCTTTTAGAATTCAAGTCAAATTGCATGATAGCTTCCACATTTTGCAAGCCTTATTCACTTAGAAAGTTCTAGCCTTTCATGCACGTTCTTGCTGATTGATTATTTTTGGTGTTCTGTTTTGGAGAGATCAACTCTCAACATGAACTCGTCCATTCCTATATTTTTCTACTTGTCCTCATAATTTTCCTTCTTTCACACATGCAAAACTAAGTTGGAAGGCATGTCTCATACTATTAATGACTGAAGATTTCTGCACATGCCCTGGAGCCTGGGCAAATTTATTGATTGGTCAACACATTTCTTTCATAATTCAAATATGATTGTATGATAGGTTTCCACAGCTTTGCAAACCATAATATTTAGAACATTCTAGCCTTTGGTGCACTTTCTTAGCTGGCCCATCCATTAGTTTTTCTTTTAAAAATCAAGTACGATTCCATGATATACTTCTACAGTTTTGCGAGCCATAATCTTTTAGAAAGTTCTAGCCTTCCGTGCACATTCTTGCTGATTGATCCATTAGTCTTCTGTTTTGGAGAGATGAACTCTGCCAACATGAACTCTTTTGTTCCTATTTTTGTATACCTGGTCCTGATAATCATTCGTCTTCTGCACATGTAAAACTTTAATGTTTGAAGGCATGACTCGCAGCATCCCATTGCTAAAGCTTTCTACATGTGTACCTAATTGTATAAACTATTTGTCTCTCTCTGTTCCAATATAGTTGTTTGGAATGAGTGCACTCAATCTTGGTTTGGAACAACAGAGAAGTTAAGAACAGTATCATCTGAAGCAGTAAGCTTTGGAAATGACCAATTATGGAAATGTAAAAATGTTTGATTCATTTGCATAATTGTTCATCTTTGTTTCCTTGTGAGTTTTAAGATTGTTAGGCCCTGTTTAAGATTATACATATGATTCATATTCATCCTTCCCTTTATTTTTGCTGTATTATTTAGAGCACTGCTACACGCACTAAAATTTTCTTACAAAGCTCTTACTAACAAATTTCTCAACCATTTGATTTAACTAGATGAAAGTTACAAAAAATCTAGATTTACTTACAGCTTGCCACATCAGAGTTTGTAAGCATTTTGTAAGAAAATTTTAGTACGTATAGACTTTTCCTATTATTTATGTTATTGCCTACAGAGTTTACTGTTAGTCTGTCATTTTCTTTTCTTCCTTTCACACTTTGTTTATGAAATAACATCTTATACTAAGGTTGTTAACCTTCTGATAATTTAGGGTGGGAAGGTGCGTGATACGCTGTTTCAAGTTCTTGAAAATGAGGCAGATGTAATCATAAAACATGGAGCCCAGTCAAGGGAGAGTAGGCGTATGGCTACACGAGGAATGCACTCATCCAAATTCTGCCTCCATCCTGCTGGAGATACTCCCTCGGCATGCAGATTGTTTGATGCGCTTGTCAGTTTATGTGTTCCTGTTATAGTCAGCGATTACATTGAATTACCATTTGAAGATGTTATAGATTACAGAAACATATCAATATTTGTTGAGACAAGCAAGGCTGTACAGCCTGGATTTTTAACATCAACACTTCGAGGAATCAGTTCACAGAGGATTCTAGAGTACCAGAGAGAAATAAAAAAGGTTAATTTCATCTCTCTCTCATAGTTGATGCTGCCATGTGCATATTACATTCAGAATTAGCTTCGTGGGTTACATTGCCAGGAAAAGAGAGTGAGAAATACATAAATATTTAGTATCTGCACCTTCAGTTAATTTTGTGAGCACATGATTCAGGTTTAACTGCTTGGTACATTTTCCCAGGAAGATAACCATTTTTCTCCTGGCATTTAGTACGAAACATTGGCAATATCTTGAATCACCTAGTTGTTTGCAGTTATTTTGCAATTTTGGCATGTTATAGTTTTATAGGCATGTTATACATATGATATTTTGGCACGTTTGTCTTAACTAGTAAAACCTGAAATTTTGTTTCAGGTAAAACATTATTTTGAGTATGAAGATCCAAACGGACCAGTGAATCAGATATGGCACCAAGTTTCTTCAAAGGCACCATTGATCAAGCTGTTGATTAACCGCGATAAACGCCTAGTTGAAAGAGGTACCAATGGAACAGATTGCTCGTGCATCTGTTCGACCACGAAGGAACTTCTACGTAAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025961