BGIOSGA026279

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Revision as of 06:42, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA026279| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA026279, complete gene.| tag = OsI_271...")
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Gene Name

BGIOSGA026279

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA026279, complete gene.

LocusTag

OsI_27129

Ensembl Transcript ID

BGIOSGA026279-TA

Ensembl Protein ID

BGIOSGA026279-PA

Length

7722

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:25273950..25281671

Sequence Coding Region

25273950..25274058,25275416..25275482,25275555..25277205,25277348..25277419,25277635..25277835
,25281576..25281671

Genome Context

<gbrowseImage1> name=IndicaChromosome07:25273950..25281671 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:25273950..25281671 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACGATGATGCGCGCGGGGGCATACGAATTGGATGCCGGTGTCATTGAGGATGCTGACGCCGGCGGAGGCGAAGTTGGCGCAGACAAGCAGGTTCTCGGGGGCTCAGCGACAATCAGCAGGCTGCGGCTCCCATGCATCAGAAAACTAGCAGACAGTTTTCCCAACACCAAACATGAGCTCGGTCCATATGCGATGATCGTGTACCAGCTTTGTGCTCTAGTGGTGGTGTCATTTGGCAACTTCCAGATTCCAGCAGCTGTTGTGCGTGTCGTCCTCGCACTGCTACGCCTTGTACCGCAGAAACCGCATAAATACTTGGTAGATGACAAGAATGGTGAGCATGATAGCGAGAAAAACCTCGAGCCGTCACTAAACATCTTCTACGGGATGGTGCTTGCACAAGGGATTCTCTACATTGTGGCCTGCTTACTGGAGGTATTTTCATTCATCCCTCGGAGATACCTCATCCGCCGTAGCGGATTTGGAGGTCAGATGGGAGTGGAATATGTCAATTTGTACTATGCATATGCCTTTGAGAAATGCATGGGAGGGGCTGTGCTTGCTCCAAAGAAGATCAGCCTCATCACATTTGCCATGGATTCCCTCAACTCAGACTCATCCAGGAATAAGCTCTATGGGGTTCAGATGCTGCACAGATTTCTCAAAAAGGAGCAGCTAAGGACTAAAACAATCACAAAACTCACAAATGCCAAGAAGACGGTAGCTTTGTTGTTCGATATGCTGGGCTGGACAAGTGACGGGGATGAAGAAATCAGATTCTTCGCCGCAAAGGTCACTGCCGAGCTTGCTGGTAGCCTCCGAGTTGTTCAAATCCCTGGGGCAACACAGCTTGTAGCCTCACTTCTGGACACTGATCACCAACAGAGAATAAGGGATCATTTTCTGTTAATTGATAGCCAAGTGGGAAGAGAAGACTCACCAATTCAGCAAGTTGGCATGGCTGAACAGAACTCCCCTGTGCTTAAGTACTTGAAACAGATGGCAATATATTTTTTTATTCCGGTGGATGAGCCATCTAACACGCATCAACGGAACTCACGTTTGCTCAGATGGTGGAAGCAGATCACAAAACGCTGGTCAGTTCCAGAGGAGGAGCCATCCACGGACCAAGATTTCCTCCCCATACAAGGACTGCTAATTCTTCAGAGGCTTGCTAACTTTGATCCTGGAAACTGCATGGAAATCAGCAGAACAACAGGCCTCATCTCAAAGATGATAGATTTTATAAGCTACAGAAATCATATGACAAGTACTAGTGAAGCCCACCAAATAATGCTGGCAAGTTTGTCACTTAGGGTGCTGAGAAGACTTGCAAGTGCTGAAGGGAAGTTAGGTGTAACTCTGCGGCAACAGATTTTGGAACATACCTTCATATTGAGCAATCTTGCAGAGATCATGGATGACAATGGGAGCAGCCATGATTTGAAGCAGTTGGCAGCAGAAATCCTGAAGAACCTTGCCATGGATAGAAACACTAGTGAGGACATCGGGCACATCCGAGTGATCATCAGTAGTTTGATGCGTGAATTTCTCAGCCAAGATCCATCCTCAAGTAGAAACTGTAATCACTTGCTACGGAAAAATGCCGGTCAAGCACTGGCAATTCTGGCAATGGAGAGTACAGATAACTGTTTGGTTATGTTAATGGAACCAGGGTATGTGTTCATTAGAGAACTTACAACTATGATCCATGATAACAGGTACAAATGTACAGCAGCAAGCCTGCTGTGGAATATGTGCGAGCATGCTCAGCCTGAGCTCAGCAACTCAGACCTGAAGGAACTGTCTTACATCTTACGAGAGGGAGAACCGACCTGCAGTTTGCACATTGTTTCTCAAAGCATACACATATGTGCTCTTAATATTGATAGCATTGTGCTGGAACGAACAATGGATGCAGAAGGGGCAGAACTAGAGGTCTTTATTGGCCTTAGTTCACAAATATGTAAAGTCATTCCTGAAGACTTTGCCCGAGAAGTAGAGCATGGTCAAATTAAGGAAAAATTCGTAAAGAGGCTTGTCGATGTGCTTAATGCACATATGAGACCCAGTGCCCATTGTCCTGGCATCAGGAGGTTAAAGCATATTGTTGCTGCAATGATTTCTTTGAAGGGTCTTGGAGGTCTCCTCTTTATCCTCAGCAGTTCATTGGGTGCTTATCTCTTGGTATGA</cdnaseq>

Protein Sequence

<aaseq>MTMMRAGAYELDAGVIEDADAGGGEVGADKQVLGGSATISRLRLPCIRKLADSFPNTKHELGPYAMIVYQLCALVVVSFGNFQIPAAVVRVVLALLRLVPQKPHKYLVDDKNGEHDSEKNLEPSLNIFYGMVLAQGILYIVACLLEVFSFIPRRYLIRRSGFGGQMGVEYVNLYYAYAFEKCMGGAVLAPKKISLITFAMDSLNSDSSRNKLYGVQMLHRFLKKEQLRTKTITKLTNAKKTVALLFDMLGWTSDGDEEIRFFAAKVTAELAGSLRVVQIPGATQLVASLLDTDHQQRIRDHFLLIDSQVGREDSPIQQVGMAEQNSPVLKYLKQMAIYFFIPVDEPSNTHQRNSRLLRWWKQITKRWSVPEEEPSTDQDFLPIQGLLILQRLANFDPGNCMEISRTTGLISKMIDFISYRNHMTSTSEAHQIMLASLSLRVLRRLASAEGKLGVTLRQQILEHTFILSNLAEIMDDNGSSHDLKQLAAEILKNLAMDRNTSEDIGHIRVIISSLMREFLSQDPSSSRNCNHLLRKNAGQALAILAMESTDNCLVMLMEPGYVFIRELTTMIHDNRYKCTAASLLWNMCEHAQPELSNSDLKELSYILREGEPTCSLHIVSQSIHICALNIDSIVLERTMDAEGAELEVFIGLSSQICKVIPEDFAREVEHGQIKEKFVKRLVDVLNAHMRPSAHCPGIRRLKHIVAAMISLKGLGGLLFILSSSLGAYLLV</aaseq>

Gene Sequence

<dnaseqindica>1..109#1467..1533#1606..3256#3399..3470#3686..3886#7627..7722#ATGACGATGATGCGCGCGGGGGCATACGAATTGGATGCCGGTGTCATTGAGGATGCTGACGCCGGCGGAGGCGAAGTTGGCGCAGACAAGCAGGTTCTCGGGGGCTCAGGTAAGGCAGCGCGGGCATGTGAGTCGGGAAGTTGATCCCGTACGGCGACGCCGCTCGCATCCTTCCGTCGGCGCCGCCCGCGTCCCCGTCCGCCCGCCCCGCCATTGCCCACTACCCCTCTTCACCGAATCTCGCGCGTCTCGCCGAGGAGCACCATCGCGCCTCCACGGGGAAGATGCACTGGTGGAGAAACCATCTTTGGTCGGTCGTCCGAAATCCACAATAGTCTCGGTTCCACTAAAAACCGGGACTAAAGATCGATCTTTAGTCCCGGTTGGTGGCTACAGCGGGCATATTTGATCTTTAGTCCCGGTTGGTGTCATCAACCGGGACTAAAGAGAGGGTAGCGGCAGTCCATCAGCTAGTCCTTTTTTCTTTTTTATTTTCTCCCGAATCGAGTGGTATGCATATCATCAAATCAAACCCCAAATCCACATCACAACTCCACAGCACGATTCACAGATTCACCACAAATTCATTCACAATATCAATTCACATATTCATTCACAACATCACAAATATATTCACAATATTGATTCAAAGGTTCATTGACAACATCGAGTCACATACTCATTCACAACATCACAGATTCATTCACAATATCGATTCATAGATTCATTCACAGATCAAAACATCCAAACCACAAATTAAAAAAAATCAAAAAAAAAATCGACTCACCGGCCGGCCTCCCATCCCGCCGCCGGCCGGCCACCCATCTCGCCGCTTCCCCTCCGGCCGGATCTGGGGGAGGGGAGGGCGAGGCCGCCGGCGACCGGCCTCCATCCCGCCGGCCCGCGCCGGGCCGCCGCCGGCCGTCCTCCATCCCGCCGCTTCCCCTCTGGCCGGATCTGGAGGAGGGGAGGGCGAGGCTGCCGACGACCGGCCTCCATCCCGCGCCCACGCCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGCGATAACAGGCTAGATTACCAGTTATTTTTCAGTACTAGAGGAGCTTTTAGACTTCTTGGCTGGAGCGGGTTGCTGACTGTGGCGGTATATTTTTCCGTTGTGCTGGTGATCCTGTCACGCTCTCTCGCTTCCATTGGTGGTAATGTATTGGTGGCTTTACTCGTGGATATGGCGATGCTACTTGCATTGGGTCAGTTGCTGTCTCCAGCAGCTCTAAAACTACTTTGCGATCCGCTACGACATGCTATATCGCTGTGGAGCCCATTACTTGCGATCCTATTGATCGGTCCGTGCATTACTGTGCCAAGCTACGACTTCTATCCCGGACCATTCATTTCGACAAACTCAGAGACCCAATGGATAATGTACCTAGTACTATCTTTGTTTGTCCTCTTAGCGACAATCAGCAGGCTGCGGCTCCCATGCATCAGAAAACTAGCAGACAGTTTTCCCAACACCAAACAGTCAGTTTGGCGTCAAATCATTCTAAACTTGTGCATGCTTGCTGCGATTGTGATGCTGGTATTCATTTTCAGTGAGCTCGGTCCATATGCGATGATCGTGTACCAGCTTTGTGCTCTAGTGGTGGTGTCATTTGGCAACTTCCAGATTCCAGCAGCTGTTGTGCGTGTCGTCCTCGCACTGCTACGCCTTGTACCGCAGAAACCGCATAAATACTTGGTAGATGACAAGAATGGTGAGCATGATAGCGAGAAAAACCTCGAGCCGTCACTAAACATCTTCTACGGGATGGTGCTTGCACAAGGGATTCTCTACATTGTGGCCTGCTTACTGGAGGTATTTTCATTCATCCCTCGGAGATACCTCATCCGCCGTAGCGGATTTGGAGGTCAGATGGGAGTGGAATATGTCAATTTGTACTATGCATATGCCTTTGAGAAATGCATGGGAGGGGCTGTGCTTGCTCCAAAGAAGATCAGCCTCATCACATTTGCCATGGATTCCCTCAACTCAGACTCATCCAGGAATAAGCTCTATGGGGTTCAGATGCTGCACAGATTTCTCAAAAAGGAGCAGCTAAGGACTAAAACAATCACAAAACTCACAAATGCCAAGAAGACGGTAGCTTTGTTGTTCGATATGCTGGGCTGGACAAGTGACGGGGATGAAGAAATCAGATTCTTCGCCGCAAAGGTCACTGCCGAGCTTGCTGGTAGCCTCCGAGTTGTTCAAATCCCTGGGGCAACACAGCTTGTAGCCTCACTTCTGGACACTGATCACCAACAGAGAATAAGGGATCATTTTCTGTTAATTGATAGCCAAGTGGGAAGAGAAGACTCACCAATTCAGCAAGTTGGCATGGCTGAACAGAACTCCCCTGTGCTTAAGTACTTGAAACAGATGGCAATATATTTTTTTATTCCGGTGGATGAGCCATCTAACACGCATCAACGGAACTCACGTTTGCTCAGATGGTGGAAGCAGATCACAAAACGCTGGTCAGTTCCAGAGGAGGAGCCATCCACGGACCAAGATTTCCTCCCCATACAAGGACTGCTAATTCTTCAGAGGCTTGCTAACTTTGATCCTGGAAACTGCATGGAAATCAGCAGAACAACAGGCCTCATCTCAAAGATGATAGATTTTATAAGCTACAGAAATCATATGACAAGTACTAGTGAAGCCCACCAAATAATGCTGGCAAGTTTGTCACTTAGGGTGCTGAGAAGACTTGCAAGTGCTGAAGGGAAGTTAGGTGTAACTCTGCGGCAACAGATTTTGGAACATACCTTCATATTGAGCAATCTTGCAGAGATCATGGATGACAATGGGAGCAGCCATGATTTGAAGCAGTTGGCAGCAGAAATCCTGAAGAACCTTGCCATGGATAGAAACACTAGTGAGGACATCGGGCACATCCGAGTGATCATCAGTAGTTTGATGCGTGAATTTCTCAGCCAAGATCCATCCTCAAGTAGAAACTGTAATCACTTGCTACGGAAAAATGCCGGTCAAGCACTGGCAATTCTGGCAATGGAGAGTACAGATAACTGTTTGGTTATGTTAATGGAACCAGGGTATGTGTTCATTAGAGAACTTACAACTATGATCCATGATAACAGGTACAAATGTACAGCAGCAAGCCTGCTGTGGAATATGTGCGAGCATGCTCAGCCTGAGCTCAGCAACTCAGACCTGAAGGAACTGTCTTACATCTTACGAGAGGTGAGCTGCAAATTCTTCTGTCTTTTTTTGATAGACTAGAGACAAAAACTACTAATTGAAGTATCAAGTGCAATACTGGGGGTGCATACTATAACTACTATTTTCATGTACTTGCTATCTGTACTTTTTCATAAATTGTTAGGGAGAACCGACCTGCAGTTTGCACATTGTTTCTCAAAGCATACACATATGTGCTCTTAATATTGATAGCATTGTAAGCTCATGTCATGATATTGATTATTTGAACCCAACAACATGCAAAAACTATTGTACATTGGAAAACTAAGTATACTGTCGGAAACGTCCTGGGTGACCAAACTAAATAGGTGATAATGTAGCTGAAGTTTGTTGAATAATGTTTTTACTAATCATGATTTTGTTGGCTCACATGGCGTCGCTATTTCCACTAAACATGGTGTCGCTAAACAGGTGCTGGAACGAACAATGGATGCAGAAGGGGCAGAACTAGAGGTCTTTATTGGCCTTAGTTCACAAATATGTAAAGTCATTCCTGAAGACTTTGCCCGAGAAGTAGAGCATGGTCAAATTAAGGAAAAATTCGTAAAGAGGCTTGTCGATGTGCTTAATGCACATATGAGACCCAGTGCCCATTGTCCTGGCATCAGGAGGGTAATTGTTCAGCATGCCATATACTTGATGGAGTTCAATTCTCGCTATGCAAATGATTTCCACAAATGCTGGATGGTGGAAACACTATCAATGGTAGAACGTACGCCCTCGAGATCTGAAAACTACAAGTTGTTTTCAGGAGACACAGGACTCATGGAGCACAACACACCACTTTCCGCTCTTGTGGCCAGAGCAAAAGAGCTGATGGGTCGTGAATGGGTAAGGGGCATCAGCAGCAGTGTCAACTGAGATATATGTAATGTAGCTGGACTAAGAGTCTTAATACTTTCAATAAACATGCTCAATTTCCTCAAGAAAACCATATGTATGATACAATTAAACTCCCACAATGTATACAGTACGAAGATTGTAAGAAAAGCAAGTTGAACTGAGCCCCTCGAGGACCGAACTGTAGCAGCTCTATGCCTCTATCTTTTTGGTGATTGGACAAAGGAGTTTTAGAACGTACCTTTTCTCCTCTGTTTTTTGGCATTGATAACACAGTTGTTGATGCCCATCCATTCTGCTTGAAAGCCATAAAGGTGAAGCATTTTTGCAGGTACATGTTGACATTGCATTCCCTGGTGACAGATAGCAACAATGTGGGGTTCAGGCATTTAACCGAACATCTGATGTGCAGCCCTAGCGAGTATGTAGATCTTCGTCGAGAGCATGCTGCACAACGCCCAGAAAAAAGAAGAGAACGGAGGAAGCAGCCAGAGCGAAAGAGTGGGATACCTTTCACTGTCGGGCGGCCATGAATGGGAGTGGAACTAGCCGGCGGCGCGGCGTCGTGGCGCGAGCTTGTCGTCGCCGGTGCGCGCCCTACCCGACCAGCCGAGCTCGATGGACCAAGGGGAAGGGGACACGCGCGCACGGCCCATTGGGCCTATATACTGTGACAGCCCATCTCACGCTCTACAAGCCTAGTGTGTTCTTTTACTATTTATCACTTGTCTTATTCAAAAATCTATGTAAATATAAAAAACCAAAAGTTGTGCTTAAAGTACATTGGATAATAAAGTAAGTCACAAATAAAATAAATAATAATTCTAATTTTTTTTAATCAGACGAATGGTCAAACAGTGCAAGCAAAAAGTCAAAATACCTTATATTATGGGACGGAGTGAGGAGTAGTAACTAATGAGTAGTGAGAGTCATGTATTTCGTATCGAAGCGCCTCCAATCCTTAGGCCTCTCACAGTGCAGCGTTCCCTCATCTCATTCCACATAGGATGAAGACCCGGATCCAAGTTTTTTATTCCCATAGTGCAAATAGCCTCATTAGTGACTTACTTTTTCGTTTCAGCCCCTGTAAATTTCCATTTCAGCCCTCATGTGTTTATCAATTTACAAAGAAGTCCAAATTTTACAGTAACCACCCTAAAATTGAGAGAAGAATATAAATCTCCACCCATACTACTTTACCCAAATCCCTCAACTTCTCCTCCCTCACGGTCACGCGAGAATTTTCAGAATTTGCCATCGAATACGCACGGTTTTCAGGATATGCCATCTAATTCGCACTACTTTCAGAATATGCCATTGGGACGCGAATTTTCTTCATTCTACGCCACTCCGTCCGCCGACGTCAGTCCTCCTCGTCGTCCGTCCGTCTGCCGCCACCTGCGCCCCGTCCAACCGCCGGCACCGCCGCGTTCTTGTCCGTCCGCCGGCGCCACCCACGCGCCACCGCCCTCGTCATGCTCGGCGTCCTCTGCCACTCGCTGTCGCTCATGCTCAGGTATGCGTCACCTCCGGCGAGCACGCCATCGTCTCCGGCGACGCCGCCCTCGACCTGTCGTGTGCCTGCAGCATCGTCATGCTCATCGCCTACCTCTTCTTCCAACTCAAGACGCATCGCCAGCTGTTTGAGCCCCAACAGGTTCGTGATTGATCGATCCGATGCATGTCCTGTACGTTCGATCCATCCAACCAAATGGTAATCAGGTTGAGGATGATTTAGTGATCGCTCAAGATGATGAGCCAGTACTGGGATGATGACGATGATGCGCGCGGGGGCATACGAATTGGATGCCGGTGTCATTGAGGATGCTGACGCCGGCGGAGGCGAAGTTGGCGCAGACAAGCAGGTTCTCGGGGGCTCAGGTAAGGCAGCGCGGGCATGTGAGTCGGGAAGTTGATCCCGTACGGCGACGCCGCTCGCATCCTTCCGTCGGCGCCGCCCGCGTCCCCGTCCGCCCGCCCCGCCATTGCCCACTACCCCTCTTCACCGAATCTCGCGCGTCTCGCCGAGGAGCACCATCGCGCCTCCACGGGGAAGATGCACTGGTGGAGAAACCATCTTTGGTCGGTCGCCCGAAATCCACAATAGTCTCGGTTCCACTAAAAACCGGGACTAAAGATGATCTTTAGTCCCGGTTGGTGGCTACAGCGGGCATATTTGATCTTTAGTCTCGGTTGGTGTTACCAACCGGGACTAAAAATGATCTTTAGTCCCGGTTCTAAATCTGTCAGGCCTTGTCAGGCCCCCCGATATCTTTAGTCCCGGTTGATACACCAACCGGGACTAAAATAGGATCTTTAGTCCCGGTTGGTGTACCAACCGGGACTAAAGATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAGGTTGGGAATGGTGGATGGAGTGCCAGGGCTGCAGCATGTAATGCGCAAGTACCAGAGGTACAGGTGCAAGGAGGCAGCGATGGTAGCTACAGAGTCCACACTACACATCCAGCTAAAGATGTGCCATATAAATATTTTGTAGTTTATCTCATGTTTCCTAGTTATCTACTCCCTCCGTCCCAAAATAAGTCAATCCCGTACTAGTATATGACACTTCCTAGTACGAGGTTGGTTTATTTTGGGACGGAGAGAGTAGATGACACCTGATATGTAAAAGTGGCCTAATATTACATTAGGAAGTATAGCAATGAATAGACCAGAGAGGGGCTTCGACCACCAAACCCTAGTCGAGCAGAGCCCTTGCCACCATGGGAACCAGTCCATGCGACATAGGGGAAATCTGCCATCGACTGAGCTCCATCTTCCTCCTCTCCTGTACACTACATAACTGAGTCTCATATTCAAAGATGCAAAAGAGAAAACGAATTCACTTCAACAACAATACCTATTTTATAGCCAACATAATACATTAGCTCTTAGTCTTCCATTAGAAAGCAGTGACCTTATTTCTGAACCAGATTTGTCATCCAAATAACGCATGGCCATCTGCTAGTGTAATAGACATCATGATGAATATGTACTGTTTAAACACAGGATTCTCGAAAATTATCTTTTCAAACTGACAAAAATTGGAAGGCACCTATTGACCTACTCTGATTTGATATGAGCTTGCTATAGTTTGTGCTCTATAGTGAATCATAAATTACAGTGCCAAGTACATCCATGCATTTTGCTTATTTTATGTCTGAAGAAAACATATGCACTCAACCAGTCAATTCCTTATCATTTTACGTTTTTTTGTCGATTACAGGTTTAGTGAATTTGGAGTTGATGGTGGGCCGGCCGCAAAAGCTCTCCAGCCGAAGTTCAACACTATTGTTGCAAATATTTCTACCCGTACTGGATTAGTGGTGCCTCATATTGAAGTAATAACTTCATGTGTTGATACTGATAATATGTTTTATTCTGTCACAAAGTGTTATTGTGGACATTTCGTGAAGTGATATTATTATTCATAGGGTTTCATTATTTTTTGTTTTTGCAGTTAAAGCATATTGTTGCTGCAATGATTTCTTTGAAGGGTCTTGGAGGTCTCCTCTTTATCCTCAGCAGTTCATTGGGTGCTTATCTCTTGGTATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA026279