BGIOSGA026296

From RiceWiki
Revision as of 06:42, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA026296| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA026296, complete gene.| tag = OsI_271...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA026296

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA026296, complete gene.

LocusTag

OsI_27154

Ensembl Transcript ID

BGIOSGA026296-TA

Ensembl Protein ID

BGIOSGA026296-PA

Length

3471

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:25513644..25517114

Sequence Coding Region

25513644..25513867,25514057..25514270,25514800..25514904,25515069..25515356,25515708..25515824
,25516236..25516328,25516674..25516704,25516945..25517114

Genome Context

<gbrowseImage1> name=IndicaChromosome07:25513644..25517114 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:25513644..25517114 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCAGCCATCTCGCCATGATCACCTCCTCCTCCTCCCGCTGCTGCTGCTGCTGCTGCTCGGGGTGTTCATCGCGACGAGCTCCGCGGCGGCGCCGGTGTCGAGGACGATCACCGTCGATCACCAAGGCGGCGGCGACTTCACGCTCGTGCAGTCGGCGGTGAACTCCGTGCCCGACGGCAACCGCGACTGGATCAAAATTCATGTCAATGCAGGAAGCTACAAGGAGAAGGTTACCATCCCGAGTCAGAAACAATTCATAGTGCTGGAAGGGGATGGGTCTTGGAATACAGAGATCACCTTTGCCGGTCACGCTCACGCCAGCATCGACGAGCTGTTGAACCACGGCTACAGCGACGTCGGCGGCTCGGCGACGTTCGACAGCTCCACCTTCATCGTCCTCGCCGACAACTTCCTCGCTCGCAGCATCTCCTTCAGGAACACTTACAACAAGTACGACAAGAGCAAGCCCGTCCAGGCGGTTGCGGCGCTCATCGGCGGCGACCGGAGCGCCTTCTACGACTGCGCTTTCTACGGTTTCCAGGACACGCTGTGCGACCTCAAGGGCCGCCACTACTTCCACCACTGCTACGTCAGGGGCGGCGTCGACTTCATCTTCGGCTACGGGCAGTCCATCTACGACAACTGCACGCTGGAGTCCAACATGCCGCCGCCGCCGTCGCCGCAGCAGCCGGGGTGGGTGACGGCGCACGCCCGGGTCACCGACGCCGACCCCGGTGGGCTGGTGTTCAAGGGCGGCTCGCTGCTGGGCTCCGGGCAGCAGTACCTCGCCCGCGCGTGGAACCAGTTCGCCACCGTGGTGTTCTACCAGATTGTGTTGTTATTAAGGCTTGTTCCTTTACTTCCGTTCAACATGTTGAACTACCTGTTGTCCGTTACTCCTGTTGGCATTGGAGAGTACATGCTGGCTTCTTGGCTGGGGATGATGCCTATCACTCTTGCATTGGTATATGTTGGAACAACACTAAAGGATCTATCAGATGTGACTCATGGCTGGAGTGAGATCTCAACAACTCGATGGATTCTCATAATATCTGGCTTCATCTTGTCTGTTGTTTTGATTGTATGTGTTACAAGAATTGCAAAATCTTCTCTGGAGAAGGCATTGGCTGAGAATGGAGATGCAGGAATTCCACAGCTTCCTGTGGTGGCCTCTCCCTCGGATTTGCAACAACCCCTTGTGATCAGAATTGACACGTCAAATGAAGATCATGAGAAGTGA</cdnaseq>

Protein Sequence

<aaseq>MQPSRHDHLLLLPLLLLLLLGVFIATSSAAAPVSRTITVDHQGGGDFTLVQSAVNSVPDGNRDWIKIHVNAGSYKEKVTIPSQKQFIVLEGDGSWNTEITFAGHAHASIDELLNHGYSDVGGSATFDSSTFIVLADNFLARSISFRNTYNKYDKSKPVQAVAALIGGDRSAFYDCAFYGFQDTLCDLKGRHYFHHCYVRGGVDFIFGYGQSIYDNCTLESNMPPPPSPQQPGWVTAHARVTDADPGGLVFKGGSLLGSGQQYLARAWNQFATVVFYQIVLLLRLVPLLPFNMLNYLLSVTPVGIGEYMLASWLGMMPITLALVYVGTTLKDLSDVTHGWSEISTTRWILIISGFILSVVLIVCVTRIAKSSLEKALAENGDAGIPQLPVVASPSDLQQPLVIRIDTSNEDHEK</aaseq>

Gene Sequence

<dnaseqindica>1..224#414..627#1157..1261#1426..1713#2065..2181#2593..2685#3031..3061#3302..3471#ATGCAGCCATCTCGCCATGATCACCTCCTCCTCCTCCCGCTGCTGCTGCTGCTGCTGCTCGGGGTGTTCATCGCGACGAGCTCCGCGGCGGCGCCGGTGTCGAGGACGATCACCGTCGATCACCAAGGCGGCGGCGACTTCACGCTCGTGCAGTCGGCGGTGAACTCCGTGCCCGACGGCAACCGCGACTGGATCAAAATTCATGTCAATGCAGGAAGCTACAAGTACGTATCCAAACTGCTAATCTTCTTTTTTTTCTCCTTTAAGAAGTTTCAATTAAACTGTTTTCTTTAAGAATGTTTGGATTCATCATTTCAAAAGAAAGAAAAGATCAACAAGAACGTTTGGAATTTTTGAGAGTTTTTTGTTGGTGAGTGTTTGTGTTCGTGTGTGTGTGTGTGCATGGATTGCAGGGAGAAGGTTACCATCCCGAGTCAGAAACAATTCATAGTGCTGGAAGGGGATGGGTCTTGGAATACAGAGATCACCTTTGCCGGTCACGCTCACGCCAGCATCGACGAGCTGTTGAACCACGGCTACAGCGACGTCGGCGGCTCGGCGACGTTCGACAGCTCCACCTTCATCGTCCTCGCCGACAACTTCCTCGCTCGCAGCATCTCCTTCAGGGTACATGCATATGTTAAAATATACGTGTTGAGAACAACGTATAGCTCGGCTGGTAGAGTGCTGCTAGGAGTATCCCGTAGGTTTTTTTCCCCTATCAATAATAGAAGTGCATGTCTAGTTTGGTGTGTCATATCTATATGTATGCGTCTTTCGTGTAAAATTAAAAAAATTAAAGGCTTTGGTTATGCGGCTCACTAGATCTGGTACAATAATTATGTAGTTCATATATATTTAGTATGTCGTAGAAATTTGGCATATTTATTGAAAAAGTATCTGCACATACTACTCGATGCCATTTCAGTGTTATGAATTTAGGAAAGTATTAATTACCAGAAACAAATTACTTACTCTATTCTAAAATATAACAATATTTAACTACTGGACAATTTATCTAGATACATTGTTCATATTTATACGTAAAAACTGTTACATTTTGACACGGAGTTAGTACTTGCTTTTGCTATATTTGGCTCCGAGTTACTGAGTATGACACTGGCTTGCATTGCACTGTATACATACATGATGGTAGAACACTTACAACAAGTACGACAAGAGCAAGCCCGTCCAGGCGGTTGCGGCGCTCATCGGCGGCGACCGGAGCGCCTTCTACGACTGCGCTTTCTACGGTTTCCAGGTAGGGATGATAATGGGCCTAACATTTTAGTCTAGAAAATGTTAAGGTTGGATCAAAAAGGGTTAGACTGAAATTCAATAGTTTTTTTACTTAAAAATATTTAAGGGTTGAGATGGCTTGTGAAAGAACCCACGGACTTGACCCATTACCACCCCTACCTCCAGGACACGCTGTGCGACCTCAAGGGCCGCCACTACTTCCACCACTGCTACGTCAGGGGCGGCGTCGACTTCATCTTCGGCTACGGGCAGTCCATCTACGACAACTGCACGCTGGAGTCCAACATGCCGCCGCCGCCGTCGCCGCAGCAGCCGGGGTGGGTGACGGCGCACGCCCGGGTCACCGACGCCGACCCCGGTGGGCTGGTGTTCAAGGGCGGCTCGCTGCTGGGCTCCGGGCAGCAGTACCTCGCCCGCGCGTGGAACCAGTTCGCCACCGTGGTGTTCTACCAGGTGTCCATGACCAACATCGTCGTGCCCCAGGATGCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATATTTTTTTTCTCTCTTTTTTATACAATCATGTACACATCTTTGCATGTTCTTGAAAAGAAAGTACTTTTCTAGCAACTATAGTTGCTTGATNGTTATTATTTTTATATATTTTTTTTAAAATAAACTTTTGAGCCTGCTGTAATCCTGAACTTCGTTGTTCCTTCTATTCAAGTCTTACCATTGCATGCAACGAAAGTTCTCTTTAATACAATAGTGTATTTAACTATCTAACAATGTTTGTCTTACTTATTTGCCTACAGATTGTGTTGTTATTAAGGCTTGTTCCTTTACTTCCGTTCAACATGTTGAACTACCTGTTGTCCGTTACTCCTGTTGGCATTGGAGAGTACATGCTGGCTTCTTGGCTGGGGATGATGGTATGCCAATTTCTTCTTATTTAAGCAATTTTTGTGGGACCAAGCTACATACTGGTTGGCCAGTGAACTTGGCTCTTATCATCTGCTATGCTACATTTTACTTGCATAACATGGAACCAGGCTCTGATATCATTTGCTACTCTATATTACCTGTGTTAATTGGAATCATGCCCTCAATGTTGGCCTTTTGCATAATCTGCTGCTTTATACATTATTCTCCTTCAGAAGTTGGTATTTGATTCCATAGTTCTCAATTTACATATTGACATGGACAAGAAAAGCACCCACAGTAGAACCCACTGTAATTAACTACTTTGCAGCTTACTGTATTACCATTTATCTAAAATGCTGAATCAACCCACCAAGTGTTGCAACATTTTTTTTTTGGTTAATCACATCTGTTTTTGCCAGCCTATCACTCTTGCATTGGTATATGTTGGAACAACACTAAAGGATCTATCAGATGTGACTCATGGCTGGAGTGAGATCTCAACAACTCGATGGGTGAGTAATTACTATAGCATTGTCTGTATTATGTCGTGGTTTTAGCACTACACGATATTTTTTTTCTATAATTGGTCATAAGTTTAATCTGAAGTGTGAAAGGGAAATATTGTACTTCAGGACAAGTAGGCTGCATTCAATAATAAGATTTTTACTATTAAGGGAAAAAATATACAAAAAGGAGAAAAGGAATTCCTTTTTTTTCCTTATGACCAATTACTCAAGCAACACCCCTCAGATTATTCTTGTTAGGGTTTTTTAAAAGTAGATACCATAATACATTGACGCAAATGACTTTGAGTTTTAGTGACTCTGCTGACACTAATGCTTAATTCTTCTTTTCAGATTCTCATAATATCTGGCTTCATCTTGTCTGGTAAGTGTTGTTGTCATTTTGTGGCCAATATTCATGACATTTCCACTAAATACAGCTATAGCTCAAATCTTGGTTACGCTGTTTAGATATAATTTAATGATCATTTGCTTTGCTTGGTTAGTCATCTGAGCTACTCTTTTTTTAGTTAGATTTGTTTTTCCTGAAGATACGCTGAACTAAACAAAGTTTCTTTATCATCTTAGCATATGCGTTGTTGACGACTTTTTCATGGTCCTGCAGTTGTTTTGATTGTATGTGTTACAAGAATTGCAAAATCTTCTCTGGAGAAGGCATTGGCTGAGAATGGAGATGCAGGAATTCCACAGCTTCCTGTGGTGGCCTCTCCCTCGGATTTGCAACAACCCCTTGTGATCAGAATTGACACGTCAAATGAAGATCATGAGAAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA026296