BGIOSGA026400

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Revision as of 06:44, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA026400| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA026400, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA026400

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA026400, complete gene.

LocusTag

OSJNBA0008J01.23

Ensembl Transcript ID

BGIOSGA026400-TA

Ensembl Protein ID

BGIOSGA026400-PA

Length

4147

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:26960805..26964951

Sequence Coding Region

26960805..26961075,26963413..26963639,26963792..26964424,26964502..26964951

Genome Context

<gbrowseImage1> name=IndicaChromosome07:26960805..26964951 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:26960805..26964951 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGCGAGCTTGTGCTGCGGCGTGGCGGCGTACCTCTACTACGTCCTGTGGCTGGCGCCGGAGAGGCTCCGCGCCCACCTGAGAAGACAAGGGATCGGCGGCCCAACCCCGTCCTTCCCTTACGGCAACCTCGCCGACATGAGGAGCCACGCCGCCGCCGCCGCCGGCGGCAAGGCTACCGGAGAAGGACGACAAGAAGGCGACATCGTGCACGACTACCGGCAGGCCGTCTTCCCCTTCTACGAGAATTGGAGAAAACAATACGGCCCAGTATTCACGTATTCAGTAGGGAACATGGTGTTCCTGCACGTGAGCCGGCCGGACATAGTCCGGGAGCTGAGCCTGTGCGTGTCGCTGGACCTCGGCAAGAGCTCGTACATGAAGGCCACGCACCAGCCTCTCTTCGGCGAGGGCATCCTCAAGTCCAACGGCAATGCCTGGGCTCACCAGAGAAAGCTCATTGCCCCCGAGTTCTTCCCCGACAAGGTCAAGGGTATGGTCGATCTGATGGTGGACTCGGCACAGGTCCTAGTCAGTTCATGGGAAGACAGGATTGACAGAAGTGGCGGGAATGCACTGGACCTGATGATTGACGATGACATCAGGGCATACTCTGCTGATGTGATCTCCAGGACATGCTTCGGTAGCAGCTACGTGAAAGGCAAGCAGATCTTCGACATGATCAGGGAGCTGCAGAAGACGGTGTCCACCAAGAAGCAGAACCTGCTCGCCGAGATGACCGGGCTCAGCTTCCTCTTCCCGAAGGCGAGCGGCCGCGCGGCGTGGCGGCTCAACGGGCGTGTCCGCGCGCTGATACTCGACCTCGTCGGAGAGAACGGGGAGGAGGACGGTGGCAACCTCCTCAGCGCGATGCTCCGGAGCGCCAGAGGCGGCGGCGGTGGCGGCGGCGAGGTCGCCGCCGCGGCCGAGGACTTCGTTGTGGACAACTGCAAGAACATCTACTTCGCCGGGTACGAGAGCACGGCGGTCACCGCCGCGTGGTGCTTGATGCTGCTCGCGCTTCACCCTGAGTGGCAGGACCGGGTGCGAGACGAGGTGCAGGCGGCGTGCTGCGGCGGCGGCGGACGGTCGCCGGACTTCCCGGCACTGCAGAAGATGAAGAACCTGACGATGGTGATCCAGGAGACGCTGCGGCTGTACCCGGCGGGCGCGGTGGTGTCGCGGCAGGCGCTGCGGGAGCTCAGCCTCGGCGGCGTGCGCGTGCCGAGGGGCGTCAACATCTACGTCCCGGTCTCGACGCTGCACCTGGACGCGGAGCTGTGGGGGGGCGGCGCCGGCGCGGCGGAGTTCGACCCGGCGCGGTTCGCCGACGCCCGGCCGCCGCTGCACGCGTACCTGCCGTTCGGCGCCGGCGCGCGCACCTGCCTCGGCCAGACCTTCGCCATGGCAGAGCTCAAGGTGCTCCTCTCGCTCGTGCTCTGCAGGTTCGAGGTGGCGCTGTCGCCGGAGTACGTGCACTCGCCGGCGCACAAGCTCATCGTGGAGGCCGAGCACGGCGTGCGCCTTGTGCTCAAGAAAGTGCGGTCCAAGTGTGATTGGGCTGGATTTGATTAG</cdnaseq>

Protein Sequence

<aaseq>MAAASLCCGVAAYLYYVLWLAPERLRAHLRRQGIGGPTPSFPYGNLADMRSHAAAAAGGKATGEGRQEGDIVHDYRQAVFPFYENWRKQYGPVFTYSVGNMVFLHVSRPDIVRELSLCVSLDLGKSSYMKATHQPLFGEGILKSNGNAWAHQRKLIAPEFFPDKVKGMVDLMVDSAQVLVSSWEDRIDRSGGNALDLMIDDDIRAYSADVISRTCFGSSYVKGKQIFDMIRELQKTVSTKKQNLLAEMTGLSFLFPKASGRAAWRLNGRVRALILDLVGENGEEDGGNLLSAMLRSARGGGGGGGEVAAAAEDFVVDNCKNIYFAGYESTAVTAAWCLMLLALHPEWQDRVRDEVQAACCGGGGRSPDFPALQKMKNLTMVIQETLRLYPAGAVVSRQALRELSLGGVRVPRGVNIYVPVSTLHLDAELWGGGAGAAEFDPARFADARPPLHAYLPFGAGARTCLGQTFAMAELKVLLSLVLCRFEVALSPEYVHSPAHKLIVEAEHGVRLVLKKVRSKCDWAGFD</aaseq>

Gene Sequence

<dnaseqindica>1..271#2609..2835#2988..3620#3698..4147#ATGGCGGCGGCGAGCTTGTGCTGCGGCGTGGCGGCGTACCTCTACTACGTCCTGTGGCTGGCGCCGGAGAGGCTCCGCGCCCACCTGAGAAGACAAGGGATCGGCGGCCCAACCCCGTCCTTCCCTTACGGCAACCTCGCCGACATGAGGAGCCACGCCGCCGCCGCCGCCGGCGGCAAGGCTACCGGAGAAGGACGACAAGAAGGCGACATCGTGCACGACTACCGGCAGGCCGTCTTCCCCTTCTACGAGAATTGGAGAAAACAATACGGTACGCACGTGTATATCGATCAACGACCATATATCCCTGCTAGCTGCTGTTTGATTGGTTGCATGCTACTACTGCTCTGCCCATGCTGTGTGATCTTCGTCTTCCTGCCTCTACATAAAACAGAACTCACCCTGATTTAGAACAAGAAAAGAATAATAACAGAATTGCTAGGTTTCTTGCGACATTTTTTTTGAAAGAAAACTTTTGATTTTGGACCGTTAGAACTGCTATAAGATTCATGTAGGAAATTAGTTTAAAAAATCGCAGAAAAAAGTTATAATGTGATTGTACCTTTGCTATATTTGATTTTTTTAAAAAAAAAAATTGCGCCAGATTTTTAAGATAGTTTTTTTAGGGGAAAAGGAGATATATTACTCATATATGGCGTCAACACGCGCTAAATGCATGATGAAATTACAACTGTTTCCTAGCCAAACATTTGACAAGGATTCACATCTAGCTTTATTTGCTAACAAATGACTAATCCCATTTTGGCTGCCATGGATCTTCATTAGCTTAATCTCCCTGCTCCCAGAAAGGAGATAGTTAGGTCATGTCTGTGTAAGGAAGAAGAATCTGCCCGGTGGTAAAGGAGTAATCAACGGCTGTAATCAATCGATTTAATTACTAATAATCATTAGTATTAATCATTTCCAACTTTCGGTAATGAATGGATTTAAATATATATAGTGAAGATTTGGTTCTTTCTACAAAGTAAATAGTGGAGTACTACTACTATATATGAAAAGTTTCAGAGTACGTATACTATACGTCCGTTCATTAATAGAGCAACAAAAGCATATGCATGCTGATAGGAAAGTTTATCTGTCCCTCGTTTTTGCATGCTGACTGTAAATACTGCATATATGTAAAGTCAAATTTATTTTTTAATCTATGCAAGTAGAATTTAAACATGCATTTAAGTATAACGATACTACTATATCTATATTATTAAATATTTTCTTATGACTTACTAAGTGATATGCACCAAACAAGGAGCCGTCTCCTTTAGGGTAGTTGTCGATTTCGAGCATTCATATCAATTGAAAAAGTTATTACAAAAATTAAAAAAAACAAGTCACTCATAAAGTGTTATTCATGTTTTATCATCTAATAACAACAAAAATATTAATCATAAAAAGAATTAAATAAAACGGACGGTCAAACGTTGGAAAAAAACCCACAACTATATTTAGAATGAGACAGAGGAAGTAATTGATACCAGTAGTATAATATAGGGCATGTTTAGATCCCCTAGCAAAATTTTACACCCTATCACATCGAATGTTTGTACAAATGCATCGAGTATTAAATATAAACGAAAAAATAACTAATTGCGCAGATTACGTATAAATTGCGAGACGAATCTTTAAAGCCTAATTGCGCCATGATTTGACAACGTGGTGCTACAATATACATTTGCTAATGACGGATTAATTAGGCTTAACAAATTCGTCTCGCGGTTTACAGACGGATTATATCATTTATTTTGTTATTAGACTACGTTTAATACTTTAAATGTGTCCATATATCTGATGTGACACATCCAAACTTTATCCCTTATATCTAAACACAGCCATAGCATTATTGGGCCGTCAGAATCATGGGCAGTCTCTGTGGTGTTTTGTACTGTGTCTGGGTTTGCTTCATTTAATTGCACCGAGTTCCATCGACGAGCTAGCGATAGAGAGATTTGCCATGGTATGTCATTACCACGGGAAAGTTGTGTCCTTTTCAGGAATCGTAGCTTGCCAGCGTTGCACGCACAGCCAGCCACTGTACGACTGTCTAGATAGCCGGCCGATTGCACGACGTGATCGATCGAAATATATTTTCCTCGTCGATTGATAGCGAAGTTCATGTAACTAGCAAACAGCAGCACGATCTCAGCTCACATGAACCAGCAAATTATAAACATGCCCCCAGTTTGGAGCAAATTAAACGGCTCCAGGCATACGTGCGGTGTACTCCTGTTCATAAATGACCTGCGCGCACTGCAGCTAGCTAGTGCAGGTGTGTGACTCTTTGATGTGGACTTGATCCGTCCTCCCGATCCGCTAGCGTCAATGGAGGAGCTACCCAGCTTTCATGTCAGCTAGTGTAGTTTTGTCATGTTGTGAACAGTCGTCCAAGTAGACTAATGGTATATTACTACCTTCATTTCATATTACAAATCGCTTTGATTTTTTTCTAGTCTAATTTCTTTTTAGTTCTTTCAGTAAAGGGAACGAAGAATATAGCGTGTACTTTCAATTTCCAAGCACATGTTTAGATAAAAGGGACAGTTTGAAAGCTTTGTAACCGACTGGTGCATCTTAATTTTGCTCTGGGTGTTAGGCCCAGTATTCACGTATTCAGTAGGGAACATGGTGTTCCTGCACGTGAGCCGGCCGGACATAGTCCGGGAGCTGAGCCTGTGCGTGTCGCTGGACCTCGGCAAGAGCTCGTACATGAAGGCCACGCACCAGCCTCTCTTCGGCGAGGGCATCCTCAAGTCCAACGGCAATGCCTGGGCTCACCAGAGAAAGCTCATTGCCCCCGAGTTCTTCCCCGACAAGGTCAAGGTCGGTGTATCTTCTCAAGGATAGTAAAATCACTGGCTCGTTAATTAATCTTCCAAACAACATCTGCAAGCTTAGTTTGCAAATGATCGATCGATCTGATGTATTTTCACTAACAAATTAGTGTCTCTTAATATGCAAATGTGATCATGTAGGGTATGGTCGATCTGATGGTGGACTCGGCACAGGTCCTAGTCAGTTCATGGGAAGACAGGATTGACAGAAGTGGCGGGAATGCACTGGACCTGATGATTGACGATGACATCAGGGCATACTCTGCTGATGTGATCTCCAGGACATGCTTCGGTAGCAGCTACGTGAAAGGCAAGCAGATCTTCGACATGATCAGGGAGCTGCAGAAGACGGTGTCCACCAAGAAGCAGAACCTGCTCGCCGAGATGACCGGGCTCAGCTTCCTCTTCCCGAAGGCGAGCGGCCGCGCGGCGTGGCGGCTCAACGGGCGTGTCCGCGCGCTGATACTCGACCTCGTCGGAGAGAACGGGGAGGAGGACGGTGGCAACCTCCTCAGCGCGATGCTCCGGAGCGCCAGAGGCGGCGGCGGTGGCGGCGGCGAGGTCGCCGCCGCGGCCGAGGACTTCGTTGTGGACAACTGCAAGAACATCTACTTCGCCGGGTACGAGAGCACGGCGGTCACCGCCGCGTGGTGCTTGATGCTGCTCGCGCTTCACCCTGAGTGGCAGGACCGGGTGCGAGACGAGGTGCAGGCGGCGTGCTGCGGCGGCGGCGGACGGTCGCCGGACTTCCCGGCACTGCAGAAGATGAAGAACGTACGCCGCCGCCACGCATCAAATTGTTGGCATTGAAGCTCGCCGAAGCTGATATGATCGTGCTGTTTAATTTGCAGCTGACGATGGTGATCCAGGAGACGCTGCGGCTGTACCCGGCGGGCGCGGTGGTGTCGCGGCAGGCGCTGCGGGAGCTCAGCCTCGGCGGCGTGCGCGTGCCGAGGGGCGTCAACATCTACGTCCCGGTCTCGACGCTGCACCTGGACGCGGAGCTGTGGGGGGGCGGCGCCGGCGCGGCGGAGTTCGACCCGGCGCGGTTCGCCGACGCCCGGCCGCCGCTGCACGCGTACCTGCCGTTCGGCGCCGGCGCGCGCACCTGCCTCGGCCAGACCTTCGCCATGGCAGAGCTCAAGGTGCTCCTCTCGCTCGTGCTCTGCAGGTTCGAGGTGGCGCTGTCGCCGGAGTACGTGCACTCGCCGGCGCACAAGCTCATCGTGGAGGCCGAGCACGGCGTGCGCCTTGTGCTCAAGAAAGTGCGGTCCAAGTGTGATTGGGCTGGATTTGATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA026400