BGIOSGA026420

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Revision as of 06:44, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA026420| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA026420, complete gene.| tag = OJ1200_...")
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Gene Name

BGIOSGA026420

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA026420, complete gene.

LocusTag

OJ1200_C08.115

Ensembl Transcript ID

BGIOSGA026420-TA

Ensembl Protein ID

BGIOSGA026420-PA

Length

3134

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:27263500..27266633

Sequence Coding Region

27263500..27264511,27264600..27264674,27265064..27265221,27265602..27265825,27266024..27266633

Genome Context

<gbrowseImage1> name=IndicaChromosome07:27263500..27266633 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:27263500..27266633 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGGTGGCGCCTTCTAAGATTGAGGATGATAGGGCCCTCGTGTTATGCCAGGAGAGGAAGCGTTTCGTCAGAGAAGCAATCGACGGAAGATGCGCACTTGCAGCTGCTCACTGTGATTATATTCGGTCACTGAGAGACACTGGCTTTCTGCTAAGGAAATGTTTTGAACATGAAGCATCTGAAGAATCGATACCAAATAATAAATCGCCGTCTTCTTTTCAGGCCAGTCATATGAAAGCTGCCATGAATTCCATTAGAACTTATCTGGAGAAGGTGGCAACTCCTGTGACAGTGACTATGGTCAGTGCCTCATCTCAAGATCCTACTGGTACTTCACCATTGGACCATTTTGACCAAATTCACCCAGGTGACAACCAGTTTTCACCTAAAGAAAAGGATAGATCTGGCCAATGTTTGGACAAGGTGGATGATCCTAGACCCTTCCTAGAGGAGGGAATCCCAGAGCTCGAAGAGGAAGGGGAGAGAACTCCTTCGAATGAGGAGGATGGTTTTGCAGAATCAAAAGATGATTTTGCAAATGAGGAAGAGAATTTCTCTGAATCAAATGGTGCTTTCCTCAGTCCATCCATTGAAACGTTTGTGCCAGTGTCAAACAGCAACGACGTGTCTGATAAAAATAGTTCAACAGACAAGGCACCTGAGCATCATGGTCATGGAAGTGTGGCATCAAAAGATATTGCTTTACCAAATACTGGTTGCCAAAATGATAACCCCCAAAATGAGAGGAGAATGACTGACATTCACACAAATGAAAATTATAGCAATTCTGCTGTGTCCCCAGTTAATGTCGTACCACCTTCAGGTGCTGCCTTTCCTATGGTCTCAAAGGAACCGTATCCTTATTTAAGCATATCTGTGAAGGACCTATATACAGGCATGGTAGAGATTGAGAGATTATTTTCCAGAGCTTGTGATTCGGGAAAAGAAGTCACAAGGGTTCTCGATGAAGATAAATTACAGTTTCGCGCCCTACTACCACAAGAAACAGTGCGTGGATCAGCATCATCTAGTTTTCTGTCAACATTGTTTGCCTGCTGCAGGGAGGATGTCCCTCTTCCTGAAACTCCTTCTCAAGCTGAGGTAAAATACCTTACCTGGCATAGGTCAGTGTCTTCACAGTTGTCGCTGTCTAGAAATCCTCCTGGGGCTATTACTGTCATGCATACCTCAACACTAGATAAACTGTATGCATGGGAGGAAAAGCTTTATGATGAAGTCAAGGTCAACAGTGCCATATGCAGGAGATATGATGAGAAATGCAAGCAACTGAGAGACCAGGAGTCGAGAGGGAAAAATCAAATTCTTGTTGATTTTACCCGCGCTACTGTAAAGGATTTGCATTCCAGAATTCTAGTGGCTATTCAGAAAATAGACTTCATTTCTAAGAACATAGAAGACATAAGAGATAAAGAGCTTCAACCACAGTTGGATGAACTAATCAGAAGTTTAACTAGGATGTGGGAAACAATGCTTGAGTGCCATCATCTTCAACTTGCAATCATGAAGCTAGTATCCAGCAAACGGAGTGTAAAATTATCATTTCAGTCAGAGTCTGAATGCCAAGATGCCCTTCTCCTCTCAGCTAAGCTAATTAAATTATGTTCAGACTTCCAAAACTGGGTGGCATCACACAAGGTTTACCTGTCTAGCCTTAACTTATGGCTGCACAAGTGCATGAAACCGCTGAAGAAGAGGAAGGGCTCCAGGAAGCAAAATGTTGTTGATGTTTCTCTAACAGAATGTGCTGTTGCACCCATATTTACAACTTGCGAAATCTGGATTAAATTAATTGACGATTTACCGACCAATGAGTTGGTGAAAGCCATTGAAAATCTCGTTGCAGATGTCGGCCGTTCCTTTCCGCACCAAGAGCAGGTGCTAAATGGTGAAACAGGAGGAGAAATCCTGAGAAATAATGCCCCTGCTGATGTACAGTCAAGTCTGATGGCATTCTTAGAGAAGCTTGAAGCCTTTTCAGCAGTTTCACTGCAGAAGTATATTGATCTGCAGAAAAACATCGACGAGGCAAAGGATAGGTTTTCGAGAGAAGATTAA</cdnaseq>

Protein Sequence

<aaseq>MGVAPSKIEDDRALVLCQERKRFVREAIDGRCALAAAHCDYIRSLRDTGFLLRKCFEHEASEESIPNNKSPSSFQASHMKAAMNSIRTYLEKVATPVTVTMVSASSQDPTGTSPLDHFDQIHPGDNQFSPKEKDRSGQCLDKVDDPRPFLEEGIPELEEEGERTPSNEEDGFAESKDDFANEEENFSESNGAFLSPSIETFVPVSNSNDVSDKNSSTDKAPEHHGHGSVASKDIALPNTGCQNDNPQNERRMTDIHTNENYSNSAVSPVNVVPPSGAAFPMVSKEPYPYLSISVKDLYTGMVEIERLFSRACDSGKEVTRVLDEDKLQFRALLPQETVRGSASSSFLSTLFACCREDVPLPETPSQAEVKYLTWHRSVSSQLSLSRNPPGAITVMHTSTLDKLYAWEEKLYDEVKVNSAICRRYDEKCKQLRDQESRGKNQILVDFTRATVKDLHSRILVAIQKIDFISKNIEDIRDKELQPQLDELIRSLTRMWETMLECHHLQLAIMKLVSSKRSVKLSFQSESECQDALLLSAKLIKLCSDFQNWVASHKVYLSSLNLWLHKCMKPLKKRKGSRKQNVVDVSLTECAVAPIFTTCEIWIKLIDDLPTNELVKAIENLVADVGRSFPHQEQVLNGETGGEILRNNAPADVQSSLMAFLEKLEAFSAVSLQKYIDLQKNIDEAKDRFSRED</aaseq>

Gene Sequence

<dnaseqindica>1..1012#1101..1175#1565..1722#2103..2326#2525..3134#ATGGGGGTGGCGCCTTCTAAGATTGAGGATGATAGGGCCCTCGTGTTATGCCAGGAGAGGAAGCGTTTCGTCAGAGAAGCAATCGACGGAAGATGCGCACTTGCAGCTGCTCACTGTGATTATATTCGGTCACTGAGAGACACTGGCTTTCTGCTAAGGAAATGTTTTGAACATGAAGCATCTGAAGAATCGATACCAAATAATAAATCGCCGTCTTCTTTTCAGGCCAGTCATATGAAAGCTGCCATGAATTCCATTAGAACTTATCTGGAGAAGGTGGCAACTCCTGTGACAGTGACTATGGTCAGTGCCTCATCTCAAGATCCTACTGGTACTTCACCATTGGACCATTTTGACCAAATTCACCCAGGTGACAACCAGTTTTCACCTAAAGAAAAGGATAGATCTGGCCAATGTTTGGACAAGGTGGATGATCCTAGACCCTTCCTAGAGGAGGGAATCCCAGAGCTCGAAGAGGAAGGGGAGAGAACTCCTTCGAATGAGGAGGATGGTTTTGCAGAATCAAAAGATGATTTTGCAAATGAGGAAGAGAATTTCTCTGAATCAAATGGTGCTTTCCTCAGTCCATCCATTGAAACGTTTGTGCCAGTGTCAAACAGCAACGACGTGTCTGATAAAAATAGTTCAACAGACAAGGCACCTGAGCATCATGGTCATGGAAGTGTGGCATCAAAAGATATTGCTTTACCAAATACTGGTTGCCAAAATGATAACCCCCAAAATGAGAGGAGAATGACTGACATTCACACAAATGAAAATTATAGCAATTCTGCTGTGTCCCCAGTTAATGTCGTACCACCTTCAGGTGCTGCCTTTCCTATGGTCTCAAAGGAACCGTATCCTTATTTAAGCATATCTGTGAAGGACCTATATACAGGCATGGTAGAGATTGAGAGATTATTTTCCAGAGCTTGTGATTCGGGAAAAGAAGTCACAAGGGTTCTCGATGAAGATAAATTACAGTTTCGCGCCCTACTACCACAAGAAACAGGTTAGATATCTTGCAATGCTTATTTCTGTTGCACTATTTCTTTTCATATCTTCTCTTGTAATTTGAGGTGCACAATAATTTCTGGCAGTGCGTGGATCAGCATCATCTAGTTTTCTGTCAACATTGTTTGCCTGCTGCAGGGAGGATGTCCCTCTTCCTGAAAGTAAGCTTTTTTTTCCATTTATTAGTATGAAATTCTATTTCCTGCACTGCTCAGCCCTATGTACTCCTTTTTTTTATAGACATATGACATATCACATGGAACTTGTAATGTTTCTGTGTAATTGTTCTTATTGTCATACTCCTCTATTGTAATAGATGATATCATACTCTGCTATTGATCTCATTTAGTTTTGTTTTTTTTAATCTCTCAGCTATTGCATTTTCCTTATATTGTAACAAATGGTGTCTCATATAGTCATATCTTAGAGTCAAGATTGTCCGTCGTAATTTGACCTTGCTGTTTCTTTAGTGCTCTATTTTCCTGTGTAAACTGTAATACCTGTGTGTTCCCACTGTACAATGAATTTAATGTACCATGGTATAATGCAGCTCCTTCTCAAGCTGAGGTAAAATACCTTACCTGGCATAGGTCAGTGTCTTCACAGTTGTCGCTGTCTAGAAATCCTCCTGGGGCTATTACTGTCATGCATACCTCAACACTAGATAAACTGTATGCATGGGAGGAAAAGCTTTATGATGAAGTCAAGGTAATTAGCTTTTTTGTGGCTACTCTATGTGAAATACCTAAATCTTTTAATTTTGGCTGACAGTTTAATCCATTTTGATTTATGTTCCACATGTCTGATTGCTTGTCACAACATGACTTTCTTTTCCCCGCCTTTCAGAAACCATCGAATATACATTGATTCTTCCGATTAATCCCTTAGCTGGAACTCCCTACATTGATCGCTAGAATTCATAGATAGATTACTTGCTTCTTTAATCATAGAGGTTTCAGATATTGTATTAGTCAGAGTTTATGCAGTTTATGACTAGTGGTAGTGATTTTTTGTCAAGAATGTTCAAATAAAATCTGATAATTCTTCTGAAGTTTCACACCAAATGATTATCATGATTCTGCTTTCAGGTCAACAGTGCCATATGCAGGAGATATGATGAGAAATGCAAGCAACTGAGAGACCAGGAGTCGAGAGGGAAAAATCAAATTCTTGTTGATTTTACCCGCGCTACTGTAAAGGATTTGCATTCCAGAATTCTAGTGGCTATTCAGAAAATAGACTTCATTTCTAAGAACATAGAAGACATAAGAGATAAAGAGCTTCAACCACAGTTGGATGAACTAATCAGAAGGTATATTTGCCGATTCAGTTTTTATAGAATAATTTGTAGTTTGATGTGCACAAGAAGAGAGTATTGTGTGCTTGAGTGTCATGCATTGTTTCAGGATTTTCTCAGACTGTTTTAACAGAATGCACCAATCACAGTATGCAGTTTGCATTAAACTGACAGCTATATAAATCTGACAGTGTCTGCCTGTCTTTACTGTAGTTTAACTAGGATGTGGGAAACAATGCTTGAGTGCCATCATCTTCAACTTGCAATCATGAAGCTAGTATCCAGCAAACGGAGTGTAAAATTATCATTTCAGTCAGAGTCTGAATGCCAAGATGCCCTTCTCCTCTCAGCTAAGCTAATTAAATTATGTTCAGACTTCCAAAACTGGGTGGCATCACACAAGGTTTACCTGTCTAGCCTTAACTTATGGCTGCACAAGTGCATGAAACCGCTGAAGAAGAGGAAGGGCTCCAGGAAGCAAAATGTTGTTGATGTTTCTCTAACAGAATGTGCTGTTGCACCCATATTTACAACTTGCGAAATCTGGATTAAATTAATTGACGATTTACCGACCAATGAGTTGGTGAAAGCCATTGAAAATCTCGTTGCAGATGTCGGCCGTTCCTTTCCGCACCAAGAGCAGGTGCTAAATGGTGAAACAGGAGGAGAAATCCTGAGAAATAATGCCCCTGCTGATGTACAGTCAAGTCTGATGGCATTCTTAGAGAAGCTTGAAGCCTTTTCAGCAGTTTCACTGCAGAAGTATATTGATCTGCAGAAAAACATCGACGAGGCAAAGGATAGGTTTTCGAGAGAAGATTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA026420