BGIOSGA026862

From RiceWiki
Revision as of 07:33, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA026862| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA026862, complete gene.| tag = B1111C0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA026862

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA026862, complete gene.

LocusTag

B1111C03.1

Ensembl Transcript ID

BGIOSGA026862-TA

Ensembl Protein ID

BGIOSGA026862-PA

Length

5607

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:24026263..24031869

Sequence Coding Region

24031525..24031869,24030969..24031121,24030595..24030887,24028804..24029065,24028657..24028731
,24028493..24028576,24026263..24027042

Genome Context

<gbrowseImage1> name=IndicaChromosome08:24026263..24031869 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:24026263..24031869 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGTTTGAGGGATTCCCAAACCTGAAGAAGCTACGCCTCCATGAAGTTACCCTCCCGGAGCACATGGGAAATATGTTGGCTGCCTTGATTTCCGCGTCGCCATTGCTGGAGGAGGTGGAGCTTGTAAGTGTGTTTCTTGTCGGCGACTACCCTGACGAGGAGTGGGTGATTCGTGCGCCCAATCTCCGTAAGCTTATAATGGTTGCTGCGTTTCCTTATGGTGGCCGAGTGGAGGAGCTTCCACGACTGGAGCAAGGGATTCTGTGCGGCCCCAACTACGCCAAGTTCTTGACGGGGATGGCTCATGTGACCAAGCTAGAGTTCATGTGCCACTATATGTTGTCAACTGAAGTTGATGTGCTGGAGCAGCTACCGTTCTTGTTTGAGAATCTTAGGAGCTTAGTCATTAGTGTTAATTTCTGTAAAATGTCCCACATTTTATTTATGTTCTGTCTACTTAGAAGTGCTCCTGTTCTTGAAGAACTTGATGTTGTGGGACAAAGCAATGATGCTCAGGATATTGATGCGAATGATGAGTTCTTGAATGCTCAGCCAACCTATGATATGTTTGCGAAACTTTGTGTTGTGCGAATGAAGAAGGTTGCTTGCCTCTGTAATGAGATGCACTTTATGGAGTTTGTTCTAAACAAAGCAAGAGTACTGCGAGTGCTATCTGTTTATCCTTCTTCTGGCGTCACTTGTAGTAATGAGCAGGCTTTTATAACAGAACATCCGAGAGTTTCACCTGATGCACAAGTCATCTTCATGAATAGAGAATCTGCAAACAATGGTTACATGGACACTCCCAGTGTTAATTATAAGTTGGAAACAACAAGAACAGGCAACTGGATAGATCTTGCACATCCTTGCAAAATTAATCGGTTGGATCTAGATGCCGTGGATCAGCATAAACATATTGAGGAGATGTTGCTAATACGGCAAAAGTTACTGAAAGAACGCAAGGAGATGGCACAGGCTCTTCATGAAGATAAGAAGCTTTTGCTAAACTACTTCGCTGCAGTTAAAAAATACTTCACTTCTAACCTAAAGTATCTGTCTGAGCAATTGAACATTTCCATTCCACCATTTCCTGAGCCTTCGTCAGTCTCATCATCTTCCCATCCTACCTCGCCCAGGTTGGCAGAAGCTCTTACCGATCCTGCCAGTTGTAGTGCTGACAATGTGCAAGCAGATTCTCGAGCTGACCAGCAGCCGAAGCCGAGCCTGAACTCCCTCCCGTCGGAGATCCTCGAGAACATCGTCGGCCGCCTCCCCGTCCGCCAGGCCGTCCGCACGTCGGCTCTCTCCCTCGACTGGCGCCGCCGCTGGGAGTCCTCCCCGGGGATCCGCTTCGGGTGGGGCAGCGGCGAGGCGGGCGCCGCCGCCGCCGTCGGCCAAATCCTCGCGCGGTACGCGTGCCCCGTCCGCCATTTCCGCCACGGGTGGATCGAGAGCGGTGGCTCCGCCCGCGCGGACGAGTGGCTCGTCGTCCTCGCCGGGAGGGGCGTCGAGCACCTCGCCCTAATCTTCTCGGAGGCCGACAACTTCCTCTTCCACACGCTTCACGCCGCCATCTTCTCGTGCCGCGAGCTCACCAAGCTGGAGTTCGGAAGCTGCCGCCTCCCGGCCGCGCCCTCGGACTTCTCAGGGTTCCCAAATCTCACCGTGTTAACCCTCACCATGGTCGCTTTTCCACCCCATGGGGAGAGGACTTTGGAGGCGATGATCTCCTCGGCTCCGTTGCTTCAGTCGCTGGAGCTTAAGAATGTTAGTTTGGAAGGCGGCGAGTGGGATGAGTGGGTGATTCGGGCACCAAATCTCAAGGATTTGATTATTCAGTTAGAGTTCGATTTTCTATGGGAGATCGAGCAGCTTCCTTCCATCCAGACGGCGACTATCAGTGTTGATAATGAATCTACCGATCGTGATTTTGTTCAGCTACTGACATGTTTTGCTCGACCTTCATATACCGGTAAATTGGTTTGCTGA</cdnaseq>

Protein Sequence

<aaseq>MGFEGFPNLKKLRLHEVTLPEHMGNMLAALISASPLLEEVELVSVFLVGDYPDEEWVIRAPNLRKLIMVAAFPYGGRVEELPRLEQGILCGPNYAKFLTGMAHVTKLEFMCHYMLSTEVDVLEQLPFLFENLRSLVISVNFCKMSHILFMFCLLRSAPVLEELDVVGQSNDAQDIDANDEFLNAQPTYDMFAKLCVVRMKKVACLCNEMHFMEFVLNKARVLRVLSVYPSSGVTCSNEQAFITEHPRVSPDAQVIFMNRESANNGYMDTPSVNYKLETTRTGNWIDLAHPCKINRLDLDAVDQHKHIEEMLLIRQKLLKERKEMAQALHEDKKLLLNYFAAVKKYFTSNLKYLSEQLNISIPPFPEPSSVSSSSHPTSPRLAEALTDPASCSADNVQADSRADQQPKPSLNSLPSEILENIVGRLPVRQAVRTSALSLDWRRRWESSPGIRFGWGSGEAGAAAAVGQILARYACPVRHFRHGWIESGGSARADEWLVVLAGRGVEHLALIFSEADNFLFHTLHAAIFSCRELTKLEFGSCRLPAAPSDFSGFPNLTVLTLTMVAFPPHGERTLEAMISSAPLLQSLELKNVSLEGGEWDEWVIRAPNLKDLIIQLEFDFLWEIEQLPSIQTATISVDNESTDRDFVQLLTCFARPSYTGKLVC</aaseq>

Gene Sequence

<dnaseqindica>1..345#749..901#983..1275#2805..3066#3139..3213#3294..3377#4828..5607#ATGGGGTTTGAGGGATTCCCAAACCTGAAGAAGCTACGCCTCCATGAAGTTACCCTCCCGGAGCACATGGGAAATATGTTGGCTGCCTTGATTTCCGCGTCGCCATTGCTGGAGGAGGTGGAGCTTGTAAGTGTGTTTCTTGTCGGCGACTACCCTGACGAGGAGTGGGTGATTCGTGCGCCCAATCTCCGTAAGCTTATAATGGTTGCTGCGTTTCCTTATGGTGGCCGAGTGGAGGAGCTTCCACGACTGGAGCAAGGGATTCTGTGCGGCCCCAACTACGCCAAGTTCTTGACGGGGATGGCTCATGTGACCAAGCTAGAGTTCATGTGCCACTATATGTTGGTAAAGATTCTGGATTTTCATGGCTTAATGTTTTAATTGATTGCTTTTTCATAAGTGGCTGAGGACTTATTATACCATGCCTATGTAGTTGCTTACTGCTAAATTGCTAATTGCAAAAGATAGAAAGGAAAAGAAGAGAAGAGGCTTTTTATATTCATAGAAAAGACAATGTTCAGATAACACTTCATTTTAGACAGAGCAGTTCTACATTATCTGAGATGTATAATATTTCCAACTTCTTCTTCCTGCCACACATTAGAATTAGGAAATGGAAAAACATGATATGCAACATTACTGTAGAAATCAATCAATGCCCACTGAAACATTACTTTTTGTGCAAACTCATTGTTTGTTTTTTACTTCATCTGTATTGTCTAACACCTTATTTGTTTTCCTTTTTCAGTCAACTGAAGTTGATGTGCTGGAGCAGCTACCGTTCTTGTTTGAGAATCTTAGGAGCTTAGTCATTAGTGTTAATTTCTGTAAAATGTCCCACATTTTATTTATGTTCTGTCTACTTAGAAGTGCTCCTGTTCTTGAAGAACTTGATGTTGTGGTAATGTTAAATGATCACTTGCAAATTCATTATGCCATTACTTGTTTCAAGGTAATGATACTGTCTATGTTTCCTTCATAGGGACAAAGCAATGATGCTCAGGATATTGATGCGAATGATGAGTTCTTGAATGCTCAGCCAACCTATGATATGTTTGCGAAACTTTGTGTTGTGCGAATGAAGAAGGTTGCTTGCCTCTGTAATGAGATGCACTTTATGGAGTTTGTTCTAAACAAAGCAAGAGTACTGCGAGTGCTATCTGTTTATCCTTCTTCTGGCGTCACTTGTAGTAATGAGCAGGCTTTTATAACAGAACATCCGAGAGTTTCACCTGATGCACAAGTCATCTTCATGAATAGAGAATCTGCAAACAAGTAAGCATTCTGATTCTAATATTTTCTTGTGTTGTTCCATAAACCCATCGGTCACTGTCTTGTCCTAAACCACAATTAAATACAGTTATACTTGGCAATGCCTTCTAGTATACATATTTGGTCGCGGTGTTGAAATGTAAATGCACTCCAGGGTGGACACCATGGAAACCTGCATTCCTAGTTAGGTCTGAGTCTTACAGGAAGTTGTTCTGCCCCCTCATGCTCCATGCTTCCACTTCCTCCTTCGACAATCGACAACTCTCCAGATCTACAGCATACCTGTCCATCTCCTACTCATGCTTCAGCTAACCAGATAAACTTCTATCTGTTTACATCTGCAATCTGTATATCTCGGTTCTTCTGCTCTGCTTTCCCTTTCTGATCTTTTTTATATCAAGTTCCAAACATAGAGAATTATTCCTATGCATCTACTCTAACTAGGACTCTGTCACTGAACTCTATAGTTCCAAGCAAGTCTGATAAGTTCATCTTTTGATATATTTTAGAACTGTCACTGAACTCTATAGCTTGTTACTACAACTGTCATTGAAATCTATAACTGAGTATTTATTTCATGCCTTTATCCTTGTACTCTGTGACAACCTTGCTGGTATACTATATGCACACTTGGTAAGTAAACTGATAGTGTATTCACTGCCTTATATTGGCTATAGCTTACATTATAAAGTTAAGTTGGTCCTTCCAACATATTGAAAAATGTATTTGTGCTTCTCAAAATCTTTAGCAGTGAATTGCACTCAAGAAACTAATTTTTTTCTTTGAAACTGCAGTAGTGCGGTTTCATACTTTCACGGGAGCCTGTAAGCTCCCCAGTATGTGGATTCTCCTCTCCTTCCAAAGTGTTGCTGCGATGCATGATGAGGAGTAATGGTACCTCCTCACAAATAAGAACTTGAAAACACGCTGCCCCTGGCCCTGCGTGCTTGCAAGTACCATTAGAGAAGCTTCACGTGGTACCACCCCACATATTTCACTTTTACATGTGACAAGGGCCTCTGCAACAATGGCAAGGTGGTGTGGATGCATTTGCTAGGAGGTAGTCTCGATTGACAGTTGATAATCTGCTTCTTAGCTGGAAGCTGAATTTTGTTTTGAGGTGAAACCGGAATGAGTTGAAAGATTTTGAATCAATTTGTAAATTGTTGAATCAAACTGAAAAAAAAAATCTTTTAATATGAGTGGGATGACATTGAATAGGGGAAATGTTTTTCGTATTGAGTTGAAAATTTCTTGAACCGAGTTGATGAGCAGCTGCAGATTCCAATGTGGGGACAAATCTTAGGACAGGTAGTGGGAGAGGGCTGCTGGGGAAGTGGGAAGTCCTCATAACATGTGTTGGTGGGACAAAGTAGTAAGGCATGAATGGTGTATCTGTCCCCTTCCCACAAACACTCTTAAAATAGTTGCTCATCTTTTTTTTTCTTGTATATTTAGCACTATGAAATTTGCCTTCCCCGTATCCATCTGATACTGATATTCTTCTTACTTTTAATCTAACTTAATGCCAGTGGTTACATGGACACTCCCAGTGTTAATTATAAGTTGGAAACAACAAGAACAGGCAACTGGATAGATCTTGCACATCCTTGCAAAATTAATCGGTTGGATCTAGATGCCGTGGATCAGCATAAACATATTGAGGAGATGTTGCTAATACGGCAAAAGTTACTGAAAGAACGCAAGGAGATGGCACAGGCTCTTCATGAAGATAAGAAGCTTTTGCTAAACTACTTCGCTGCAGTTAAAAAATACTTCACTTCTAACCTAAAGGTAGCTAAGATTAACCATTTTTCATTTTTTATTCTTCAATTCATTAGTTCTTACTTCCTGATGGAAATGCAGTATCTGTCTGAGCAATTGAACATTTCCATTCCACCATTTCCTGAGCCTTCGTCAGTCTCATCATCTTCCCATCCTGTAAGTAATATTACTTGCATACCGAATACCAGTTGTATTCATCTTGCATACTTGTCTCATAATACTTTTTGTCATCAAAGACCTCGCCCAGGTTGGCAGAAGCTCTTACCGATCCTGCCAGTTGTAGTGCTGACAATGTGCAAGCAGATTCTCGAGCTGACCAGGTAGCCATTGGTGCTTCCAGTGCTCGTGCCAATTCTCCTAAACCTGAAGACAATGTCTGACGAGTCTTTCAGCTGCTGTCTTCTGCTTCTTTCTTCCTGATGTAGCTATTCGATTTCTTGTAACTCTGGATTCTGTTTGCATTCTTGCTGAATGATGTACGGCATGATCTCGACTTAAGTTTAGTGCGTGCTGGTTTTATCATTTCTTGATAGAGGGAGGATATAACTAGAAAATAGAAATTGCTATTATACTCCACTCCATCTGCAGCCTTAGAGAAAATATGGTCGTGGAGAAACATAATTGAATGTTTTCTTCGAGAAATAACTAAATTGCATGGATTGAACAAATCTAATTATCCAAACATAATAAATTGTTTAGAAAAATTACGTTGACTGAGCATTTGGTATAATTTTAAATATAAGTTGCTGTAGCCTTTTCAACTAAAGGTACGTCCCTTGAAATTTTGTCACTTTTAATCATTTTTCTCCATGTTTGTCCTTGTCAAATAAACCCTTTGTGTTGTAGCCTTTTCAACTCAATTTTCTTGAGACAAGTATATACCTATCGTTTTTGTGCATCTAATTTAAATTTAAATGTTTTAAAAGATAGAGACGTCTCAGATGTATCATATTTAGACGGTGCAACTTAAAAACATATGCAGAACGACATATACCACCTTCATCCCTAGTCAGCATATTATGGGTGTGAAAAGATGAATATGCTCTTTATTAAGACTACACGCTTGTCCTAAACTTATATGCTCGGTTAGATTTTTGGCATACCCAAACCTTAATTAATGATGTCAAAATCCTCAGCATCAAAACATGTGAAAAACACAACAGATAAAAAAAAAAACAGGGGTACAACAACATGCAGATGCAGGATACATGTCTTGTTACGACAACTTTAACACCGTCAACCTGAGCTAACAGATTAGAAAGAAAATCTAACTTCATTTAGAAAAATAAGGAAATAATATATACACTAAAAAGTATAGATAAAATCATAATTACACTCACAGTGGATAGTAACAATTGATCCCGGTATCTATTTGATAAGTATGATATTGTACTCACGTCATATCAGTACATATTAGCTATTCTATTGAAACAGTAACAATTGATCCCGGTATCTATTTGATAAGTACTATAGTACTCACGTCGTATCAATACACATTAGCTATTCCGTTGAAACGGTATACACATTACCCATTTCGTTGAAACGGTATACCGCTACGTAGTTTCCTCTAACACAATTGCCCTAGCTCCTATACTACAAATACTCTTTCCCAAATCCAAAATCCCAAATTCACATCGCCGTCCGCCGCCTTGTCGGCTCGCCGGCGAGCCGTCTCCGCCGCCTCTCGAGTCCGATAAAAAAAAAAAAACATGGAGGGGTCGCCCCGACGCCGGAAGCTGCGGCGGCTGTCTCCGGGGGGCGGCGCCGCAGCAGCCGAAGCCGAGCCTGAACTCCCTCCCGTCGGAGATCCTCGAGAACATCGTCGGCCGCCTCCCCGTCCGCCAGGCCGTCCGCACGTCGGCTCTCTCCCTCGACTGGCGCCGCCGCTGGGAGTCCTCCCCGGGGATCCGCTTCGGGTGGGGCAGCGGCGAGGCGGGCGCCGCCGCCGCCGTCGGCCAAATCCTCGCGCGGTACGCGTGCCCCGTCCGCCATTTCCGCCACGGGTGGATCGAGAGCGGTGGCTCCGCCCGCGCGGACGAGTGGCTCGTCGTCCTCGCCGGGAGGGGCGTCGAGCACCTCGCCCTAATCTTCTCGGAGGCCGACAACTTCCTCTTCCACACGCTTCACGCCGCCATCTTCTCGTGCCGCGAGCTCACCAAGCTGGAGTTCGGAAGCTGCCGCCTCCCGGCCGCGCCCTCGGACTTCTCAGGGTTCCCAAATCTCACCGTGTTAACCCTCACCATGGTCGCTTTTCCACCCCATGGGGAGAGGACTTTGGAGGCGATGATCTCCTCGGCTCCGTTGCTTCAGTCGCTGGAGCTTAAGAATGTTAGTTTGGAAGGCGGCGAGTGGGATGAGTGGGTGATTCGGGCACCAAATCTCAAGGATTTGATTATTCAGTTAGAGTTCGATTTTCTATGGGAGATCGAGCAGCTTCCTTCCATCCAGACGGCGACTATCAGTGTTGATAATGAATCTACCGATCGTGATTTTGTTCAGCTACTGACATGTTTTGCTCGACCTTCATATACCGGTAAATTGGTTTGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA026862