BGIOSGA026879

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Revision as of 07:34, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA026879| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA026879, complete gene.| tag = B1144B0...")
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Gene Name

BGIOSGA026879

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA026879, complete gene.

LocusTag

B1144B06.39

Ensembl Transcript ID

BGIOSGA026879-TA

Ensembl Protein ID

BGIOSGA026879-PA

Length

2665

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:23797364..23800028

Sequence Coding Region

23799591..23800028,23799354..23799489,23798991..23799127,23797364..23798089

Genome Context

<gbrowseImage1> name=IndicaChromosome08:23797364..23800028 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:23797364..23800028 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGAGTTGCGGACGTCGTGGAAGTCGATGCTCTGCTGCGTCGGCGGCGGCGGGGTGGCCGGCGTTGAGGACGACGTGCCGCCGGAGAGGAGGAGGGTCAGAGGGGGTGGTCACCACCAGCGGCTGCTGTCGTCGTCGTCGTCGGCGTCGTCGGCGTCGAGGGTGTCGCTGTCGAGCCTGAGCTCGACGGGGACCCTCACGCCGGAGGACCTGTCGCTGACGCTGTCGGGCTCGAACCTGTACGCCTTCACCTACGCCGAGATGAGGGCCGTCACCGGCGGCTTCTCCCGCGCCAACTACCTCGGCTCCGGCGGGTTCGGCCCCGTGTACAAGGGCCGCGCCGACGACGGCCTCCGCCCCGGCCTCGCCGCGCAGGCCGTCGCCGTCAAGTACCTCGACCTCGACTGCGGCACGCAGGGCCACAGGGAGTGGCTGGCTGAGGTGTTCTTCCTTGGTCAGTTGAGGCACAAGAATCTCGTCAAGCTGATCGGCTACTGCTACGAGGACGAACACCGGATGCTGGTGTACGAGTACATGAGCAACGGGAGCTTGGAGAAGCATCTCTTCAAAAGTCTCGATGGCGCCATGCCATGGATGAGGAGGATGCAGACCGCCGTCGGCGCGGCGAAGGGGCTCGCCTTCCTCCACGACGCCGACACGCCGGTCATCTACCGTGACTTCAAGGCATCCAACATCCTCCTCGACTCGGACTTCAACACCAAGCTTTCCGACTTTGGGCTTGCCAAGGATGGGCCGCAGGGCGACGCGACCCATGTCACGACGCGTGTCATGGGGACAAACGGGTATGCGGCGCCCGAGTACATCATGACAGGGCACCTGACCGACAAGAGCGATGTGTATAGTTTTGGTGTGGTACTACTGGAGCTATTATCGGGTCGGCACTCGGTGGACCGCTCTCGTCGCCATAGGGAGCAAAGCCTGGTGGATTGGACAAGAAAGTACCTCAAGAAGCCCGACCAGTTGCACCGGGTCGTCATGGACCCAGCCATGGAGGGCCAATACTCCTACAAAGGGGCCCAAGAGGCTGCTTTGGTAGCCTACAAGTGCTTGAGCCCATCACCAAAGTCCAGGCCCAGCATGAGGGAGGTGGTCAAGGCCCTAGAGCCCATATTGGACATGAATGACTACCTCCAAATTGGTACATTTGTGTTCACCGTCGTTGTGGAAGATAACAAGAAGGACGATGTGACCAAAACCAAGCAAGTAGATGGTGAGAACAAGGTTGACATGAGGATCGAGGCGACAGTGGAAGAGAAGCACCAGAGTCACCATGATCGATACCGGCAGAAGAACCCAAACTCTGCAATCCATGCTGACATCGTGCTGCAACGCGACGGCTCCATCGGATCGTACACCACCTCGCTCAGGCGGCACAGAAGGACACCGAGCTATCTCAAGGAGAGGGGTGCCTAG</cdnaseq>

Protein Sequence

<aaseq>MAELRTSWKSMLCCVGGGGVAGVEDDVPPERRRVRGGGHHQRLLSSSSSASSASRVSLSSLSSTGTLTPEDLSLTLSGSNLYAFTYAEMRAVTGGFSRANYLGSGGFGPVYKGRADDGLRPGLAAQAVAVKYLDLDCGTQGHREWLAEVFFLGQLRHKNLVKLIGYCYEDEHRMLVYEYMSNGSLEKHLFKSLDGAMPWMRRMQTAVGAAKGLAFLHDADTPVIYRDFKASNILLDSDFNTKLSDFGLAKDGPQGDATHVTTRVMGTNGYAAPEYIMTGHLTDKSDVYSFGVVLLELLSGRHSVDRSRRHREQSLVDWTRKYLKKPDQLHRVVMDPAMEGQYSYKGAQEAALVAYKCLSPSPKSRPSMREVVKALEPILDMNDYLQIGTFVFTVVVEDNKKDDVTKTKQVDGENKVDMRIEATVEEKHQSHHDRYRQKNPNSAIHADIVLQRDGSIGSYTTSLRRHRRTPSYLKERGA</aaseq>

Gene Sequence

<dnaseqindica>1..438#540..675#902..1038#1940..2665#ATGGCTGAGTTGCGGACGTCGTGGAAGTCGATGCTCTGCTGCGTCGGCGGCGGCGGGGTGGCCGGCGTTGAGGACGACGTGCCGCCGGAGAGGAGGAGGGTCAGAGGGGGTGGTCACCACCAGCGGCTGCTGTCGTCGTCGTCGTCGGCGTCGTCGGCGTCGAGGGTGTCGCTGTCGAGCCTGAGCTCGACGGGGACCCTCACGCCGGAGGACCTGTCGCTGACGCTGTCGGGCTCGAACCTGTACGCCTTCACCTACGCCGAGATGAGGGCCGTCACCGGCGGCTTCTCCCGCGCCAACTACCTCGGCTCCGGCGGGTTCGGCCCCGTGTACAAGGGCCGCGCCGACGACGGCCTCCGCCCCGGCCTCGCCGCGCAGGCCGTCGCCGTCAAGTACCTCGACCTCGACTGCGGCACGCAGGGCCACAGGGAGTGGCTGGTACGTCACTCTCCACCTCACGCGTTCCTTCCGCCATTGTTGGGCTAGCTCGAGCTTTAGCTCACCGTGCTAATTAATCAACGAACCTTTCTTTCTTGCAGGCTGAGGTGTTCTTCCTTGGTCAGTTGAGGCACAAGAATCTCGTCAAGCTGATCGGCTACTGCTACGAGGACGAACACCGGATGCTGGTGTACGAGTACATGAGCAACGGGAGCTTGGAGAAGCATCTCTTCAAAAGTAAGCACACGAGAATAATTACCAACTGTTGAATCTTTTCTTCTTTTTTTTTTTTTACCCCCGTCGCAATCGTCAATAGAATCCGGGAGATTACTGGTGTTTATACACGAGTGGTTAACCGATCATTTGCGCTTAGAGCGCGCTTACGCCATCGCTGAAGTTTCAGCTCTGAAAAAATTCCGGGGAAGACTTTAGCTGACGCTGAACCGTCCTCCTGTCCGTGCAGGTCTCGATGGCGCCATGCCATGGATGAGGAGGATGCAGACCGCCGTCGGCGCGGCGAAGGGGCTCGCCTTCCTCCACGACGCCGACACGCCGGTCATCTACCGTGACTTCAAGGCATCCAACATCCTCCTCGACTCGGTGAGCACCATCCCGTTCTTGATTCCACTGTGTACTTTTCGCAGTCATTTCACTCGAGTGCAGTAGAAATTTCAGTCGTTAAAGAAAAAAAAAACTACCATGTCCTGAGAGCGAAAATTCAAACTGCCGTGAAAAATTTTACTAAGGCCACAGATGGGACTAAAACTTTTAAGTCCCTATCACATCGGATGTTTGAAAATTAATTATAAATATTAAACGTAGACTATTAATAAAACCTATCCATAATCTTGGACTAATTTGCGAGACGAATCTAATGAGCCTAATTAATCCATGATTAGCCTATGTGATGCTACAGTAAACATTCTCTAATTATAGATTAATTAGGCTTAAAAAATTTGTCTCGTGAATTAGCTTTTATTTATGTAATTAGTTTTGTAAGTAGTCTATATTTAATACTCTAAATTAGTGTCTAAAGACAGAAACTAAAGTTAAGTCCCTGGATGTAAACACCACCTAACTTTCAGACCATTTTTCGCTTCTTATTTCTGAAAATTTTGATGGGATACCACTTGTCAAGTTATCAAGTCTAGATTTGACTGTCAAAGTCTGCGTGCCACACGTTCCAAAATCGTTGGCTGGGTGTGTGGGTTCGTTAGACATGATTGCAACTTGGAAGGTTCTTGGATGGCCCAACCTTCAGGGTTCAGAGATCCCAGCTCATGCTGTCTTCTCTAGGAATAGATGGCTACACAGCACCTAATAAAAATCCATCCCTAGCATCATATCCGTACAGAATCATTATGCCAGTTAATGGCACTGGCCGACTGGCGTGATTACTAGCATGATACTGACAGAAACATTGTCGTCTGTCTCCTGCATGTCATTGTAATTGTCAACTGTGATCCCTGCCTAACCCGATCTCTGATTCATTTGATTTCAGGACTTCAACACCAAGCTTTCCGACTTTGGGCTTGCCAAGGATGGGCCGCAGGGCGACGCGACCCATGTCACGACGCGTGTCATGGGGACAAACGGGTATGCGGCGCCCGAGTACATCATGACAGGGCACCTGACCGACAAGAGCGATGTGTATAGTTTTGGTGTGGTACTACTGGAGCTATTATCGGGTCGGCACTCGGTGGACCGCTCTCGTCGCCATAGGGAGCAAAGCCTGGTGGATTGGACAAGAAAGTACCTCAAGAAGCCCGACCAGTTGCACCGGGTCGTCATGGACCCAGCCATGGAGGGCCAATACTCCTACAAAGGGGCCCAAGAGGCTGCTTTGGTAGCCTACAAGTGCTTGAGCCCATCACCAAAGTCCAGGCCCAGCATGAGGGAGGTGGTCAAGGCCCTAGAGCCCATATTGGACATGAATGACTACCTCCAAATTGGTACATTTGTGTTCACCGTCGTTGTGGAAGATAACAAGAAGGACGATGTGACCAAAACCAAGCAAGTAGATGGTGAGAACAAGGTTGACATGAGGATCGAGGCGACAGTGGAAGAGAAGCACCAGAGTCACCATGATCGATACCGGCAGAAGAACCCAAACTCTGCAATCCATGCTGACATCGTGCTGCAACGCGACGGCTCCATCGGATCGTACACCACCTCGCTCAGGCGGCACAGAAGGACACCGAGCTATCTCAAGGAGAGGGGTGCCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA026879