BGIOSGA026927

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Revision as of 07:34, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA026927| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA026927, complete gene.| tag = P0413H1...")
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Gene Name

BGIOSGA026927

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA026927, complete gene.

LocusTag

P0413H11.37

Ensembl Transcript ID

BGIOSGA026927-TA

Ensembl Protein ID

BGIOSGA026927-PA

Length

6907

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:22503883..22510789

Sequence Coding Region

22510607..22510789,22507034..22507243,22506346..22506408,22506200..22506273,22506024..22506119
,22505863..22505920,22505690..22505794,22505519..22505600,22504531..22504643
,22503883..22504284

Genome Context

<gbrowseImage1> name=IndicaChromosome08:22503883..22510789 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:22503883..22510789 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGTCGGGGTCGGCGACGCAGTTCCGGTACACGCAGACGCCGTCCAAGGTGCTCCACCTCCGGAACATGCCGTGGGAGTGCACCGAGGAGGAGCTCGTCGAGCTCTGCAAGCCCTTCGGCAGGGTCGTCAACACCATGTGCAACGTCGGCGCCAACCGCAACCAGGCCTTCGTCGAGTTCGCAGATCAAAACCAGGCAATTTCAATGGTTTCATATTATGCTTCTTCTTCAGAACCTGCTCAAGTTCGTGGCAAAACTGTATATATCCAGTACTCAAACAGACAAGAAATTACCAACAATAAAGGAACTGGTGATTCCTCTGGCAATGTTCTTCTTGTCACTTTTGAAGGTGTCCAGCCTAATGATATTAGCATAGATGTCATTCATTTGGTATTTTCCGCATTTGGGTTTGTCCACAAGATAGCAACCTTTGAGAAGGCTGCTGGTTTCCAGGCACTTATCCAATATACTGATGCTCCAACTGCACTAGAAGCAAAAAATTCGTTGGATGGAAGAAGCATCCCGAGATATTTACTTCCTGAACATGTCCCCACCTGTCACCTGCGCATAACCTTTTCTGCGCACAAGGATTTGAATATCAAGTTTCAATCACATCGTAGCAGGGATTACACGAATCCATATCTTCCTGTGAATCCAACAGCAATCGAGGGAATCGCACAGCCCACTTTAGGCCCTGATGGGAAGATAAAGGAGCCTGAGAGCAATGTGCTTTTGGCTTCAATAGAGAACATGCAGTATGCTGTGACGGTGGATGTTCTACATACTGTGTTCTCTGCTTTTGGTACTGTTCAAAAGATTGCAATGTTTGAGAAGAATGGTGGAATGCAGGCCTTAATTCAATATCCAGACATCACAACGGCAGCAGTTGCTAAACAAGCTTTGGAAGGGCACTGCATATATGATGGAGGTTACTGTAAGCTTCATCTGTCGTACTCTCGTCATACTGATCTCAATGTAAAGGCACATGATGAGAGAAGCAGAGACTACACTGTTTCATCAGATCCAAGTGCACAAATGCAAGCTGCAGCGCAAGCCCCAGGTCCTAGCACTCCAGGAGTGGCATGGCAAAACACCGCACCTAGTGCTTCCTTTTATGGCAGCACTGCGGCAGCGACTCCTGTTGGACAAGTGCCAGCTTGGAATCCAAACATGCAGGCAGGTGCTTTTGGATCGGCATCGTCTGCATACACAACCCAACCAATGATGCCAGGATCAGTTCCACACTATCCAGGAATTGGATCCAGTTCCGGAGCACTGCCAGTATCGTTCCAGGCCTCACATCAGATGCCACAGTATGGTGTACCACCAGCTGCTCCACACCATGCTCCACCGGCTGGCCAACCAATGTATTTCCCGAAATAA</cdnaseq>

Protein Sequence

<aaseq>MPSGSATQFRYTQTPSKVLHLRNMPWECTEEELVELCKPFGRVVNTMCNVGANRNQAFVEFADQNQAISMVSYYASSSEPAQVRGKTVYIQYSNRQEITNNKGTGDSSGNVLLVTFEGVQPNDISIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNSLDGRSIPRYLLPEHVPTCHLRITFSAHKDLNIKFQSHRSRDYTNPYLPVNPTAIEGIAQPTLGPDGKIKEPESNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAMFEKNGGMQALIQYPDITTAAVAKQALEGHCIYDGGYCKLHLSYSRHTDLNVKAHDERSRDYTVSSDPSAQMQAAAQAPGPSTPGVAWQNTAPSASFYGSTAAATPVGQVPAWNPNMQAGAFGSASSAYTTQPMMPGSVPHYPGIGSSSGALPVSFQASHQMPQYGVPPAAPHHAPPAGQPMYFPK</aaseq>

Gene Sequence

<dnaseqindica>1..183#3547..3756#4382..4444#4517..4590#4671..4766#4870..4927#4996..5100#5190..5271#6147..6259#6506..6907#ATGCCGTCGGGGTCGGCGACGCAGTTCCGGTACACGCAGACGCCGTCCAAGGTGCTCCACCTCCGGAACATGCCGTGGGAGTGCACCGAGGAGGAGCTCGTCGAGCTCTGCAAGCCCTTCGGCAGGGTCGTCAACACCATGTGCAACGTCGGCGCCAACCGCAACCAGGCCTTCGTCGAGTTCGTAAGGACACCCCCCTCCCCTCCCCCCGATTCCTCCCTCCTCCGCCCCCTGCCCCCGCCATCTGATCGATTACGGATTTACGGCTGCGTGTGCGATCGTCTCCTCTGTATGTATGTGAGGACGTGGCTTATTAGGATTTGGAGGAATCTGTCCTTTTGTGGGGGTTGCGATTTAGGGTTTATGGCGGTAGCAAGTCGTTTTGTTGCTCGATTATGTGGGAGTATGATGTATGAGAGGGAAAAAAATTCTTATCTTCTGTGATGATTTGGGCAGTGGTAGTTCCAGAATTTGGTGTTTAATTGTTAGTTTAATATGTGGTTTGAATAACTAAGATAGTACGGCTCTGTCCAATGAGATGCATACAAACAATACATCCTTTTTGTCATGTGCTGGAAATGCGTGACTCTTGTTGGTGTTTGCACTTGTGTTTGTGTTTCCATGGTTTATTTTGGCATCTTTTGTTGTTGCGTGCAATTGGATTTTGTCTGGCATGACACGGCGAATATTCGTAGGAGCAGGGAAACAAACTGATCTTATTTGTTAACCTGAATAATAAAATTAACAGCGAGGAAGATACTGCTGTTGGAAGGATGACTTATCTAGTGAGCAAGCTTTGGGCTATCTGATAATTGATAAGAGATCTGCATTAAGTTTTTATTTATACATGTTTGATTGTTGATTGCTAAAAAGGTTGTGTTCCTCAGTCTGTATGCTGTAGTATCACTTTTTGGAATCAGGATTTTTATGGCCAGTTTTGGTTCCTTGAAACTTTTCTATTTCAATGTTATTTGTTTTGTAAGGTTGTTGGCCTGTTGGTTATGTTGAATTGGGGTATCAGAAAAGATGATTTATTAAAGCAATTTTTCACCTTCTTGTAAAAAGAAGTGTTCAGTGTTATTAAGGTGTTAAGGTGGTTTAAGATAACGTGGGTATGCCTAAGCATCATAGCACACAAGGTGCAACAAGGCAGTGTAATATGAGATGGAGGAGGCTTGATTAAGGGAGAAATCTGCAAAGAAAATAGCTAGGAGAAGGAGAAAAAAACCACTAGGCCAAGCTGCCAGTCCACAGAAGACCAACATCAGCTTCATGACAATACCCCCACGTCATCGTGCGCAGCCAGTTGAGGAGCAGAACACTAGGCACGCAAGCTGAGATCGACATCTGCAGCCGCCTGTTTTCAGCCACCTCCCCCATAGCTGACCTCTGCCAGCTATCACTGCCATCAGAGGTCAATGCCTCTACCCACCTCTCTGTCCACCGCTGCCGCTGCCAGAGATTGAGCTGCAGCAAGCAGCAGCAGCTGGGATCTGGATCTAGATCTGATTGTAGGGGTGTGGGATCTGCGACAGCAAGCTGGCTGTGGTAAGGATTGAGGAAGGTGACCACAACCAGCTAGGGTTCCAGTATGAGCTTGCCCCCTTCTTTCCCTTTCTTCACTGGTTTTGCCTATAAGGCAGAGTGGGTGTCTTGACCCATGCAACTGCTAACCACTATGGAGACACTAAAGTGACGCCTTAACAGCCATGGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTAGCACAATTGATTCACTCTATTTACCCAACCAAAAATTCTATATACATGAAGTTATGCTCAATTTGGTGTTATATATGTTATATATTATACAACTAATAGTATGTGATAGTATATAAGCCAATTATTAGGATTTTTTAGTGTAAAAATTCTTTTCCCCTCTTTATTTTGGATACCTAACATTAAAATCCTAGGTCCGCCCCTGGTTATGCGATAAAACTTTCAATATGTTTCCATCTTTGCCTAAGTTCATACACAACATTATGTTATTATCGGTTATTGTAGGACAAAATACATATAGTTCAATTGTTGTTAATCACCAATTTTATGTAAGAGTGAACGTACTTGTAAGAAAAAAAAAATTCAAATACTGTACTTAGATAAGGGGTTATCTATGGGTATAAATACAAGACCCCCTAAAAGGAGAAGGGATAAGCCATAAAGCCACAATACACAAGCCAATACGCCGCCAAACGTCAATATCAGAGATTAGTCTAGACAAACCCAATCCGGTACCTATGAAGACCGGTAAGAGGGATCTAGCGCCATCTCTGATCTCAACGGGTTCATATTCGAGGAGGAAGACTACCCCGTAGTCGACTACGAGTTGGTGTTCATGCCGCCAAGTTGACGACGGCTAGATAGGTTATCCCAATTGTCGTACTCTGTGGATCTCTATATCAATCCCATATGAACAGGATATAGGGCTATTACTTGTCAGATAAGGGGCTCGAACCTGTATAAAAATCTCTGTCTCCATCTCTTTTATCTCAATCTCGCATATACCCTGGTACTAATGATCCCCATACCATCCAAATACCGTAGTCGCGATCTCAAACGTCAACTGTGGCGCGCCGGGTAGGGGGATTTTGGTGCTTCAAGGTTTCGACGAGATTGGTTCAAGAGATGGATTCTCCAACAATAAACTGCTCGACGACTTCGGCTGTCGAGAGATCTAGCCTGACCGAAGTATGTCCCCCGACGAGATCGGAATCATCACTATCAACTATTCGATTTGGCGAGATCGACCAAGCTTCGAGACGTCACCACCGCGGATTTCAAGAGCACATATGTTCTCCTGAGAGCAAGGATAATAGAAGAGCTCACTTTCTACTATTAGAGCACCCGCAATGGTAAAGTAAGGTGCTATCTATAAAACATGTATATCTCAGCAATAGACTCGATTAATAGTAAACCACCTTAATAGTATGTCTACATTGGTATCTATAGCTCTCTCATGCATTGCCTCGTTTTTTTCTATAGACTATCTCTAAGTTAGTAGATAGCTTTGCTCTCTCTCTTCATTTAATACATTCCAAGTAAAAAAATATGCTGACATGGATCTCTTGTAGAGAGCCTATAGATAACCATTGTGGGTGCCCTTAGCCTATTTTAAAGCCAACATATATAATAGATTAGCTATAAGGTTGGGTATAATTTTCTTCTCCTTCCTCTATCTCTCACTTCATTTGTACATTTAATGTATTTGTCTTGGAGCTTGTGTTAAGTTAGCTCTTGTATAAGAGCCAACACTCTTGAGTTTTGATTACCTCTCTCCTTTATATAAGCTTAGAGTAGTCTTATAGCTCACTGTTATATTTGCTCTAAGAGCACCCGCATAGTAAAGTAAGATGCTCTCTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTTTCAAATGAACAGTGAACTGTAGACTGGACATTGAATTGCTGTTCTTTGTTCCTCACTTATATGATAAATGTACCTTTTTTCAGGCAGATCAAAACCAGGCAATTTCAATGGTTTCATATTATGCTTCTTCTTCAGAACCTGCTCAAGTTCGTGGCAAAACTGTATATATCCAGTACTCAAACAGACAAGAAATTACCAACAATAAAGGAACTGGTGATTCCTCTGGCAATGTTCTTCTTGTCACTTTTGAAGGTGTCCAGCCTAATGATATTAGCATAGATGTCATTCATTTGGTAAGTATGCATGTTTTACATGTGATGCACTTCACTTAGCTAACAGCTTGGTTGGAATAAACTTATATTGCCTATATTTCAAAATTGACTTGGGCCTCTGTTGCTATGATACAGTGATCTTTTTTTTTATCGGGACATATCTTTATCAAAATAAAACCGGCTTGATGTAAACTAATTACTAAATGCACACTATTATTGATTTGTTATGCTTGCTAGACAATGTTAATCCATGGACTTTAGGACATGCATACTGATTCCTGGCGAAAAACTTAATGATTCACGTAGTCTTTAAAAGCACTGCAGACTGCCTATTTCACATACATTGTATGGCAGTTAAGATACTTAAATGGCACCTCCATGTCAAGGGAAATTCAAAATCTCCTCTTTCTTCTACCAGGCTTATTACTTCTTCAATTTGTCATCCTGCATCATATGACTTGTCAGCATAGCATGTTCACTAATATAATAATAGCATCCAAGTTCATTACTTCAGTACAATTCAGTTCTATGCTCCATGTCCTTCTCTTTCTGCATAATCTTGCATGTGCTCTTCGACTGATTAGTCGAAACTCGAAAGTGGACTTGTATCCTCATCTTTTGTTGCAATGGTTTGTGAATGTTTTAGGTATTTTCCGCATTTGGGTTTGTCCACAAGATAGCAACCTTTGAGAAGGCTGCTGGTTTCCAGGTAAGATAGTTCTTATATTGAGCTGCTACTATAATTCTTGTAAGTTCAGCTTATCAGCTGGAATTTTCGTAGGCACTTATCCAATATACTGATGCTCCAACTGCACTAGAAGCAAAAAATTCGTTGGATGGAAGAAGCATCCCGAGGTAGCACTTCATTTTATAACTATTATTATTATGCGCTACAAACCTCCGATGCAGCATTACTGAAATGTCAAGTCATGCAGATATTTACTTCCTGAACATGTCCCCACCTGTCACCTGCGCATAACCTTTTCTGCGCACAAGGATTTGAATATCAAGTTTCAATCACATCGTAGCAGGTAAAGAGGGAAGCTGGCGATGTTTAAATTTGATTTTAACCTCCATTAGCATATGCTTGATGAGACAATACTCAAATTCACATCACTAACTGTTTGGTTACAGGGATTACACGAATCCATATCTTCCTGTGAATCCAACAGCAATCGAGGGAATCGCACAGGTATGCTTTAACATTTCATACTATTCGTTGTGTTCTTTCTCTCCTTCCTTACAGTGGAGGTTATGCAGCCCACTTTAGGCCCTGATGGGAAGATAAAGGAGCCTGAGAGCAATGTGCTTTTGGCTTCAATAGAGAACATGCAGTATGCTGTGACGGTGGATGTTCTACATACTGTAAGTATATTTTATTCTTACTGACTCCAGGTGTTTTATCTAAAATAAGGACAAAATTAGTATATAATCATGTTATGAGATAATTTCAGGTGTTCTCTGCTTTTGGTACTGTTCAAAAGATTGCAATGTTTGAGAAGAATGGTGGAATGCAGGCCTTAATTCAATATCCAGGTATTTTCCAACTAGCATGCAGCTCACAGGATTTTTTGCACCTTGTTTTGTTGGATGTACATAACCTGAATGCACTTGGGTGTGATATTTATTCATTCATCGTATAGTACTATAGTTAGTTCCTGATAAGCCATCTCATAGATGATAATAAACTGTGTAACCTGTGATGCCATGCTGACTATTGAGCTACATATTTGTTTATGCATCATAAGTTTCTAAACCTGGAAACTTCAGCAGAGGGGTGTCGGAGTTCGTGAAGGCTTAGAATGGACATCTGCAACTATCCACAGCTATAAAGTTGCCTTTAGTAATTTCTTGATCATTTTTACCTTCTGTGTAAGCATATTCTCTTTCTTAGTAGAGGTTTGCTTCTGAGGTCTTTCTGTCATCACTGCATCAATATTTTCCTCCTTGTACTCTGCATTAGATAATACCTATCTTAATTGTCTCCAATCCTTTCACTTTTGAGTAAGATTAGCGTTCACCATGTCAACAAAGACCTGTCTTGCATCTGCAGTCCAAAAGCCATCGTGGCATTTGATGTGTGGTCAATTTCTATAGCTATATCTATACCTAAGTGTGACTTCATAGTGGCACCTCATATTACAATATTTGGAATTTGGTTTTATCAAATCTCTGATCCTCCAGAAATGACTTCACTAGTTTGTGTAACTTGGGACAAAAAATATTACTTCATCAAACGGAAAGAGTTTTGCTGTTCACTTTGTTTCCTCGATCACAAGCACTACAAATGCATTCCTCATTTGCCAATGGAATCTATTTTACTTCAGCTTTTCAATGATCTAATCATGCATTGCAATACCATTTTAGTTTATTGGAGTTATCTTATAATTGAAAAAACTGTTTTATTGCAGACATCACAACGGCAGCAGTTGCTAAACAAGCTTTGGAAGGGCACTGCATATATGATGGAGGTTACTGTAAGCTTCATCTGTCGTACTCTCGTCATACTGATCTCAATGTAAAGGTATAAATGATAGTTTCAGGCTGTGTAAATTAATAAATATTGAAGTACATATATCAGTTGACTAATTGTTGACTAATGAATAGTGAATGTAACTCATTTAGAAAATAGCGTACTGCTACATGAAAGCAGAATAATATATCATTCATTCAATTTGACAAAGTACGCTTTCTGAACATATTTATTTTTTCTCCTACAGCTTCCTTCTGCATTTTTCCTCCTAATGGAGTTCTATTTTTTTACATTCAGGCACATGATGAGAGAAGCAGAGACTACACTGTTTCATCAGATCCAAGTGCACAAATGCAAGCTGCAGCGCAAGCCCCAGGTCCTAGCACTCCAGGAGTGGCATGGCAAAACACCGCACCTAGTGCTTCCTTTTATGGCAGCACTGCGGCAGCGACTCCTGTTGGACAAGTGCCAGCTTGGAATCCAAACATGCAGGCAGGTGCTTTTGGATCGGCATCGTCTGCATACACAACCCAACCAATGATGCCAGGATCAGTTCCACACTATCCAGGAATTGGATCCAGTTCCGGAGCACTGCCAGTATCGTTCCAGGCCTCACATCAGATGCCACAGTATGGTGTACCACCAGCTGCTCCACACCATGCTCCACCGGCTGGCCAACCAATGTATTTCCCGAAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA026927

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA026927&oldid=33184"