BGIOSGA026962

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Revision as of 07:35, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA026962| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA026962, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA026962

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA026962, complete gene.

LocusTag

OSJNBA0077M12.113

Ensembl Transcript ID

BGIOSGA026962-TA

Ensembl Protein ID

BGIOSGA026962-PA

Length

4758

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:21575500..21580257

Sequence Coding Region

21579952..21580257,21579781..21579939,21579644..21579685,21579453..21579518,21579261..21579371
,21579093..21579173,21578910..21578987,21578547..21578623,21578096..21578177
,21577925..21578025,21577162..21577201,21576984..21577043,21576866..21576909
,21576659..21576791,21576333..21576533,21575917..21576245,21575673..21575740
,21575500..21575579

Genome Context

<gbrowseImage1> name=IndicaChromosome08:21575500..21580257 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:21575500..21580257 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCGGCGGGACGACGCCGCTGTCGGAGGCGGCGGGGGGTTCCAGGAGCTGTTCGACTCGGTGCGCCGCTCCATCTCCTTCCGCCCCGGGGGCAGCGCCGCGGCCGCCACCCTCGACGAGCCCGCCTCGGCTTCCGGCGGTGGGGGGTTCAGGGGGCGGATCAGCACGTGCCTCCGCAAGTCCAGGGGGATGGGGCTGCTCGGGATGGTGGCCTCCAAGAGCCCCTCGCCCCCGCGCCGCCGCCTCCTTCCCCCGCCGCCTTCGCCGCCCCCCGCGCCAACGAAGTCGCTGTCGCCACAGCCTGCGGTGGTGTCCCAAGGGGGAGACGGTGCGGGTGGAATCGGAGGAGAGGAGGAGAACCCGCCGATCCGGTGGCGGAAGGGCGATCTCCTCGGGAGCGGCGCGTTCGGGTCGGTCTTCCTCGGCATGGATCTTGATTCCGGCGAGCTCCTCGCCGTAAAGCAGGTTCTGATCGGGAGCAGCAACGCAACGAGGGAGAAGGCCCAAGGACACATAAGGGAGCTTGAGGACGAAGTGAAGCTACTCAAGAACCTCTCACACCCCAACATTGTTCGATATATTGGAACGGTGCGGGAGGAGAACTCGTTAAATATTCTGCTGGAGTTTGTGCCAGGAGGATCGATCCAGTCACTCCTTGGGAGGCTGGGATCATTCCCTGAGGCTGTCATCAGGAAATACACTAAACAGATTTTGCATGGCCTGGAGTATTTACATCGCAATGGAATCATACACAGGGACATAAAGGGAGCAAATATACTTGTTGATAATAAAGGATGCATTAAGTTGGCAGACTTTGGGGCATCTAAGCAAGTGGAGAAGTTGGCGACCACTGCCAAGACAATGAAAGGGACACCATATTGGATGGCCCCAGAAGTAATTGTTGGGAGTGGGCATGACTTTTCAGCTGATATCTGGAGTGTCGGATGCACTGTAATTGAAATGGCAACTGGGAAAACTCCATGGAATCAGGAAATTCAAGAGGTTTCTCTTCTGTATTATGTTGGGACAACAAAGTCACATCCACCGATACCAGAGCATCTTTCCCCAGAAGCCAAGGATTTTCTGTTAAAATGCTTACAGAAGGAACCAGAACTGAGATCTACTGCATCAGACTTATTGCTGCACCCATTTGTTACAGGAGGATTGGAAGATCTTCACCAGGTTAATCATGCAGCACACAAGGAAACCTCTGAGCTTCCGGCATACGATATGCTAACTGGTGACCTGGGCTTGAATCATTCTGGCAACCCAAGTAACTTGAATTCCTATAAGTCATCAGACGTGAGACCAATATGGGATGGGCACAACAGTGATGACATGTGTCAGTTTGCTGACAATGACGTGGTAATGATTGGATCGAGCTTCAACCCTATGTCTGAACCATTTGATGACTGGGAAAGCCCAGAACAAAGATCTAGTCAATCAAGGGAATTCGGAGGATTAGCCAAACATGTTGAAAATAACATGTCTGAAAATGATTTTACTTTCCCATGTGAGGGAGGCTGTGAAGAGGATGATGAACTCACAGAATCAAAAATAAAGGAATTTCTGGATGAAAAGGCCATAGATCTAAAGAAACTACAGACACCTTTGTATGAGTTCTACAACACAGTAAATGCTGGACTTTCTCAAGGAGTTGGTGAAACTTGCCAAGTAGACAACATTACTGATTTGCAATTGCCCCTTCAAGGAAGATCACCTCCAATTCAGATGGAGGGAGTTGCAGCAGTAGGACCAACCAGCGATGTTCTGAAGAGTGCCAGTCCAAAGAGCTGCACTAGGCGTTTCTCAAGAAGCGGCGTGGAGAATGGTCGAATTTTAAGAGAAATTGCTTCGCCTCAACTCAATAAGTTTGAGGACAAGGTCCACGATATTCAAGAAAATCCCAGCATTAGCTTTTCTGAAAGACAGAAGAAGTGGAAAGAAGAGTTAGACCAAGAACTTGAGATCGGGAGAGTGATGAGGTTGGGTAGCTTCGGTAAAGCGCCATCACCAAAGAGCCGAGGCATGACCAGGAAACGGGATCGCGTCTACTGA</cdnaseq>

Protein Sequence

<aaseq>MRRDDAAVGGGGGFQELFDSVRRSISFRPGGSAAAATLDEPASASGGGGFRGRISTCLRKSRGMGLLGMVASKSPSPPRRRLLPPPPSPPPAPTKSLSPQPAVVSQGGDGAGGIGGEEENPPIRWRKGDLLGSGAFGSVFLGMDLDSGELLAVKQVLIGSSNATREKAQGHIRELEDEVKLLKNLSHPNIVRYIGTVREENSLNILLEFVPGGSIQSLLGRLGSFPEAVIRKYTKQILHGLEYLHRNGIIHRDIKGANILVDNKGCIKLADFGASKQVEKLATTAKTMKGTPYWMAPEVIVGSGHDFSADIWSVGCTVIEMATGKTPWNQEIQEVSLLYYVGTTKSHPPIPEHLSPEAKDFLLKCLQKEPELRSTASDLLLHPFVTGGLEDLHQVNHAAHKETSELPAYDMLTGDLGLNHSGNPSNLNSYKSSDVRPIWDGHNSDDMCQFADNDVVMIGSSFNPMSEPFDDWESPEQRSSQSREFGGLAKHVENNMSENDFTFPCEGGCEEDDELTESKIKEFLDEKAIDLKKLQTPLYEFYNTVNAGLSQGVGETCQVDNITDLQLPLQGRSPPIQMEGVAAVGPTSDVLKSASPKSCTRRFSRSGVENGRILREIASPQLNKFEDKVHDIQENPSISFSERQKKWKEELDQELEIGRVMRLGSFGKAPSPKSRGMTRKRDRVY</aaseq>

Gene Sequence

<dnaseqindica>1..306#319..477#573..614#740..805#887..997#1085..1165#1271..1348#1635..1711#2081..2162#2233..2333#3057..3096#3215..3274#3349..3392#3467..3599#3725..3925#4013..4341#4518..4585#4679..4758#ATGCGGCGGGACGACGCCGCTGTCGGAGGCGGCGGGGGGTTCCAGGAGCTGTTCGACTCGGTGCGCCGCTCCATCTCCTTCCGCCCCGGGGGCAGCGCCGCGGCCGCCACCCTCGACGAGCCCGCCTCGGCTTCCGGCGGTGGGGGGTTCAGGGGGCGGATCAGCACGTGCCTCCGCAAGTCCAGGGGGATGGGGCTGCTCGGGATGGTGGCCTCCAAGAGCCCCTCGCCCCCGCGCCGCCGCCTCCTTCCCCCGCCGCCTTCGCCGCCCCCCGCGCCAACGAAGTCGCTGTCGCCACAGCCTGCGGCGGCGGCTGCGGTGGTGTCCCAAGGGGGAGACGGTGCGGGTGGAATCGGAGGAGAGGAGGAGAACCCGCCGATCCGGTGGCGGAAGGGCGATCTCCTCGGGAGCGGCGCGTTCGGGTCGGTCTTCCTCGGCATGGATCTTGATTCCGGCGAGCTCCTCGCCGTAAAGCAGGTCAGGAGGCCTCTTCCAAGATGCTGATGCTTCAAGTTTCCAGCGACGGCCGATTTGGTCTGGTTTCATCACCCTTCTGCTCTTTCTGGTTGCAGGTTCTGATCGGGAGCAGCAACGCAACGAGGGAGAAGGCCCAAGTGAGTGGCTTTGCTCAATTACTTGTTTACTATCTTTATTTTCCTGACCAATTGTGCCATTGAAATAGTCTTCTTTAACCTCCTCTAAGCTCTAAGTGTTTGTAATTGGATTTTTTTTTTGTTAGGGACACATAAGGGAGCTTGAGGACGAAGTGAAGCTACTCAAGAACCTCTCACACCCCAACATTGTTGTGAGTAATGCTAAATAACCACATATGTTTTGTTCTTCAATTCGGTGGTGGTGTTTGATCTATCTGGTGTGCTTTGAGCAGCGATATATTGGAACGGTGCGGGAGGAGAACTCGTTAAATATTCTGCTGGAGTTTGTGCCAGGAGGATCGATCCAGTCACTCCTTGGGAGGCTGGGATCATTCCCTGAGGCTGTAAGTCTAACTGTTGTGTTCATCCTGTCTTCGGTAGTTTGGTTAATCACAAAAGAATCGTGTTGATTGAATGCATTTATTTATCAGGTCATCAGGAAATACACTAAACAGATTTTGCATGGCCTGGAGTATTTACATCGCAATGGAATCATACACAGGGACATAAAGGCATGAAGAGTATTCGAATTTCGAATTTTGTTGCCTTGAACCCTTTTGTTGTGTGGGTTATATATTTCTAATGTGGCATTACTGTTTTTTTTTTTCAATATTCAGGGAGCAAATATACTTGTTGATAATAAAGGATGCATTAAGTTGGCAGACTTTGGGGCATCTAAGCAAGTGGAGAAGTTGGTGAGTAGATGAACTAATTGTTTTAATTTCGTTTGATCATTTGTTCAACTATGTATTAGCTTAGCTCTAAAGTTAACTTTATAGATGCCAGGTTTATCTTGCATTTCCTTTTATCCATAGAATGCTAGTGTTTCACTTAAAAGTGAAAAGGTAGAAGACTGGAACTTACTTCATCACTGCATAGGACAGGGTTCTGTTGCTTCTTGTGTGTTTTAAATGCGGGATCATCCCTACTGTTACGTTCCACGTGTTTATATTTTTCTTTCACACGCTATCACCTTTTCAGGCGACCACTGCCAAGACAATGAAAGGGACACCATATTGGATGGCCCCAGAAGTAATTGTTGGGAGTGGGCATGACTTGTAAGTGGACAAGCTCTTTATCTCATCGTTATAGTTAACTGCTCGTTGCTCAATCCTTAGTGATGCTTGTGGTCCTCTGGCTCTCTTATTTCTTTAAGAATAAGAATATCTGTGAACTAATGTTTTGGCTAATCATGCCACCAAATGACTTATTTTGTGAAAAATATCTTAAAGGACAAAAAAAAATCCTATGAAAAAAAAGGGATGGTACAATTAGCTTATTATCTTTTCTGGCCCCAATGCCCCATTTATTGTTGCCTTTTCATTGGTGAAAAAATTTCACCAAGCTTGCTGTTCAATACCATATCCAGAAACTGTATGATGGTTTTGTTTCTTGAATTAATCCTTGTCATCTAACTATCTTTGCAGTTCAGCTGATATCTGGAGTGTCGGATGCACTGTAATTGAAATGGCAACTGGGAAAACTCCATGGAATCAGGAAATTCAAGAGGTAAATTTTGGCATCAGTATTTACCAAGAAACTTATAAGCATTGCTTATTCTTGACAATCACTATTTCAGGTTTCTCTTCTGTATTATGTTGGGACAACAAAGTCACATCCACCGATACCAGAGCATCTTTCCCCAGAAGCCAAGGATTTTCTGTTAAAATGCTTACAGAAGTATGACTACAATCACACTTTTGAATAGATGTTGATTATTGCAGCAAAATTGACAATGGGACCTATAAAAGTTTAGAATTTTCACCACAAAGAAGTGGAAAAATCGATTCAGACAATCTAGTAAGAGAAAGTGAGAAATAGTTTGGTTGTGCTAACTCAGTTTTTTTGCATAGCTGTTGTTAAACATTGAGCGCTCTTATGCGCTGTGAGTCATACCTAGAATTACATATGTGGAAATAAATCGCTCTCTCTGTATTTGAAGTTTTGAAAATTGAAGGTGGCATCCATCTGATAATGAACTGCATTACATGCATCCTAACAGCGCGATAGCTTTATATATTCTTGTGGTAGCCTACTTCCAGTGAGCCATGTTTATGTACAACTTTGTGCTCCATGTATTTCAGTATGAATAGTTTCATTTCTTTCCATTGTTATTACCTGATTACATAATAAGAGTAACGAATTCTAGATTTGTATGTGTAACTTGTGCTGTTTGCCTGATTCCTATCTTCTTCACACTGCGTGATTTTTGTCTGTGTAGTTTTGTGTATGCGTTTCCAATTAACAGCTGCAATTCAGTGGCATTTGTTGTGCAATTATCATTTGTAAAGTTTATCTAGAAATGATGAGAATCAAGCTTCAAATGGCACATTTTCCTGCATTTGGATATTATAATTAGTAAATGTTACTTCATTGCCTTCAGCATTTTGTTACTCCTTTCAGGGAACCAGAACTGAGATCTACTGCATCAGACTTATTGCTGGTATAATAAACTCTCTCTTTCTCTCTCTCGGCATTTTAGCTGTTGGGGAAGTCCTCTTGCTGTAAGGATATGTTATGTACTTTGTGAAGAGTAATACCTTAAAACATTTTTTTTCCAGCACCCATTTGTTACAGGAGGATTGGAAGATCTTCACCAGGTTAATCATGCAGCACACAAGGTTGGATTACAATAAATCCTTTTACTTGTCTATTTATCCCAAAATGTTACTCTTACAAAATGATGTACTCACAGGAAACCTCTGAGCTTCCGGCATACGATATGCTAACTGGTGACCTGTAAGTACCTTGCAATCTTGAGCCAGGCAGATCGTTCATCTTCAGTTTGATTGAACAAATTCTTCAACTTGTAGGGGCTTGAATCATTCTGGCAACCCAAGTAACTTGAATTCCTATAAGTCATCAGACGTGAGACCAATATGGGATGGGCACAACAGTGATGACATGTGTCAGTTTGCTGACAATGACGTGGTAATGATTGGATCGGTAAGTATCCGTACCTAGTCCTGACTACTTTAGCCTTATGTTTTAGTTCGTACACAAGTCACATAAGAAATGCGTATTTTGTATTCCTACATGGTATACTTATAGTTACGTAATGTCATTTCCAGAGCTTCAACCCTATGTCTGAACCATTTGATGACTGGGAAAGCCCAGAACAAAGATCTAGTCAATCAAGGGAATTCGGAGGATTAGCCAAACATGTTGAAAATAACATGTCTGAAAATGATTTTACTTTCCCATGTGAGGGAGGCTGTGAAGAGGATGATGAACTCACAGAATCAAAAATAAAGGAATTTCTGGATGAAAAGGTATTTTTCATGCTTTGAGGCAGCAATCCCTTCTGCTGCATGTCCAGTTGTTCTTAATCTACTATTGTTTACTTTTGCACTTAACAGGCCATAGATCTAAAGAAACTACAGACACCTTTGTATGAGTTCTACAACACAGTAAATGCTGGACTTTCTCAAGGAGTTGGTGAAACTTGCCAAGTAGACAACATTACTGATTTGCAATTGCCCCTTCAAGGAAGATCACCTCCAATTCAGATGGAGGGAGTTGCAGCAGTAGGACCAACCAGCGATGTTCTGAAGAGTGCCAGTCCAAAGAGCTGCACTAGGCGTTTCTCAAGAAGCGGCGTGGAGAATGGTCGAATTTTAAGAGAAATTGCTTCGCCTCAACTCAATAAGTTTGAGGACAAGGTCCACGATATTCAAGAAAATCCCAGGTTTGTTTGGAGTAGATTGCTTTGGATATGAAATTATACATGAGACAGCTATCACTTTACAGTTATGCTACAAAAGACTGAATTCACTTATTCTCTTGCAAAAGTGCTCACCTTTTGGTCAATTTAATTATGGTGTTTTCACTCATGTGAGTTATTTACCCGTTATTTTTTTTCAGCATTAGCTTTTCTGAAAGACAGAAGAAGTGGAAAGAAGAGTTAGACCAAGAACTTGAGATCGGGAGAGGTAAATGAAAAGCATTTTCCTCTCAATATTAACATGAATTGTCAGTGACTTACAGATGCTTATCTTGCTCATTCCATTTGTGAACTCCAATAGTGATGAGGTTGGGTAGCTTCGGTAAAGCGCCATCACCAAAGAGCCGAGGCATGACCAGGAAACGGGATCGCGTCTACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA026962