BGIOSGA026969

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Revision as of 07:35, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA026969| Description = cDNA, clone: J100014C05, full insert sequence| Definition = Oryza sativa Indica Group BGIOSGA026969, complete gene.| ...")
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Gene Name

BGIOSGA026969

Description

cDNA, clone: J100014C05, full insert sequence

Definition

Oryza sativa Indica Group BGIOSGA026969, complete gene.

LocusTag

P0477F03.105

Ensembl Transcript ID

BGIOSGA026969-TA

Ensembl Protein ID

BGIOSGA026969-PA

Length

1155

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:21254330..21255484

Sequence Coding Region

21255126..21255484,21254680..21255004,21254330..21254590

Genome Context

<gbrowseImage1> name=IndicaChromosome08:21254330..21255484 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:21254330..21255484 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGATGGCGATCCCCAAGGTGGACCTACGCGGGCTCGAGCCGGGGACGCCGGGGTGGGAGGCGGCCCGGGCCACGGTGACCGCGTCCATGGTGTCGCACGGCTGCGTCGTGGTCGCGCACGGCGAGCTCGGGGCGGATCTCCGGGAGGCGCTGTTCGGCCGCGCCGTGCGGGAGGCGTTCGCGCTCCCCGCCGAGGCGAAGCGGCGGAACGTGTCCACGGTGGGGCCTTACAGGGGGTACATCGCCAACATCCCCGGGATGGACTGGGAGAGCCTCCGCGTCCACGACGCCGACGACGCCGCCCGCGTCCGCGAGTTCGCCGGCCTCCTCTGGCCGGAGGGCAACCCGGAGTTCTGTGAGACGATCGTGTCGTTCGCCACGAAGATGAGGGATCTGGAGCGGACGGTGGAGAGGATGACCCTGGAGGGCCTCGGCGTCGGGGAGGACCACATCGCCTCGCACCTCGCCGCGCAGGACTACGGCGTCCGGCTGTCCCACTACGGCCCGCCGCCGAACGCGTCGACCGCCATCTCCCTGCAGGCGCACCGCGACGACAGCATGACCACCATCATCGTGCAGCACGAGGTGGAGGGCCTCGAGGTGCAGGCCGGCGACGGGAGCTGGCACGCCATCCCCCCCGAGCCCGACACCATCGCCATCGTCGCCGGCGAGCTGTTCAGGGTGGTGACGAACGGGCGGGTGCCGGCGAGCGTGCACCGCGTGAGGACGCCGAGCGGGCGGGAGCGGTACTGCGTGCTGGTCGGCAGCCGGAGCAAGGACGGCGCGGTGCTGAGCGCCATGGACGAGCTCGTCGACGGCGAGCACCCGCTGGCGTACAGGCCGTGCAAGGCGGAGGAGTTCATCCAGTTCCGCTACTCGGAGGAAGGCCGCAAATTCAGCGACCCACTCAAGGCGTTCTGCGGAGTAAACGCTACAGAATGA</cdnaseq>

Protein Sequence

<aaseq>MAMAIPKVDLRGLEPGTPGWEAARATVTASMVSHGCVVVAHGELGADLREALFGRAVREAFALPAEAKRRNVSTVGPYRGYIANIPGMDWESLRVHDADDAARVREFAGLLWPEGNPEFCETIVSFATKMRDLERTVERMTLEGLGVGEDHIASHLAAQDYGVRLSHYGPPPNASTAISLQAHRDDSMTTIIVQHEVEGLEVQAGDGSWHAIPPEPDTIAIVAGELFRVVTNGRVPASVHRVRTPSGRERYCVLVGSRSKDGAVLSAMDELVDGEHPLAYRPCKAEEFIQFRYSEEGRKFSDPLKAFCGVNATE</aaseq>

Gene Sequence

<dnaseqindica>1..359#481..805#895..1155#ATGGCGATGGCGATCCCCAAGGTGGACCTACGCGGGCTCGAGCCGGGGACGCCGGGGTGGGAGGCGGCCCGGGCCACGGTGACCGCGTCCATGGTGTCGCACGGCTGCGTCGTGGTCGCGCACGGCGAGCTCGGGGCGGATCTCCGGGAGGCGCTGTTCGGCCGCGCCGTGCGGGAGGCGTTCGCGCTCCCCGCCGAGGCGAAGCGGCGGAACGTGTCCACGGTGGGGCCTTACAGGGGGTACATCGCCAACATCCCCGGGATGGACTGGGAGAGCCTCCGCGTCCACGACGCCGACGACGCCGCCCGCGTCCGCGAGTTCGCCGGCCTCCTCTGGCCGGAGGGCAACCCGGAGTTCTGGTAAGGCCAGCTGCCTCTTCGCGGCCTCGCCGCCATGTTCGCCAGCCATGTTCTTGCTCCTCAGAGTCAGAGCTCGATTTCTCATGGGGGATTGGGGGGGTGTTCGTCCGGGGGATTGCAGTGAGACGATCGTGTCGTTCGCCACGAAGATGAGGGATCTGGAGCGGACGGTGGAGAGGATGACCCTGGAGGGCCTCGGCGTCGGGGAGGACCACATCGCCTCGCACCTCGCCGCGCAGGACTACGGCGTCCGGCTGTCCCACTACGGCCCGCCGCCGAACGCGTCGACCGCCATCTCCCTGCAGGCGCACCGCGACGACAGCATGACCACCATCATCGTGCAGCACGAGGTGGAGGGCCTCGAGGTGCAGGCCGGCGACGGGAGCTGGCACGCCATCCCCCCCGAGCCCGACACCATCGCCATCGTCGCCGGCGAGCTGTTCAGGGTACGCGCCAAACGCAACGCAATTCGCCGTCGGCGACACGTTGATCTTGAATTCTTGATCGATCTCTCTCTCTCTCTCTCATGGCGCAGGTGGTGACGAACGGGCGGGTGCCGGCGAGCGTGCACCGCGTGAGGACGCCGAGCGGGCGGGAGCGGTACTGCGTGCTGGTCGGCAGCCGGAGCAAGGACGGCGCGGTGCTGAGCGCCATGGACGAGCTCGTCGACGGCGAGCACCCGCTGGCGTACAGGCCGTGCAAGGCGGAGGAGTTCATCCAGTTCCGCTACTCGGAGGAAGGCCGCAAATTCAGCGACCCACTCAAGGCGTTCTGCGGAGTAAACGCTACAGAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA026969