BGIOSGA027037

From RiceWiki
Revision as of 07:36, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027037| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027037, complete gene.| tag = OS08G03...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA027037

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027037, complete gene.

LocusTag

OS08G0390100

Ensembl Transcript ID

BGIOSGA027037-TA

Ensembl Protein ID

BGIOSGA027037-PA

Length

5152

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:19694085..19699236

Sequence Coding Region

19698727..19699236,19696497..19697363,19695738..19696181,19695075..19695264,19694085..19695001

Genome Context

<gbrowseImage1> name=IndicaChromosome08:19694085..19699236 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:19694085..19699236 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCGCTTCTTCCGCGACTCCACCTCCTCGTCCCGCTCTAGCAGTGACCTCGCCGCCGGCGCCGACGCCTCCGCCTCCGCCGCCACCACCGCCGCCTCGTCGCGCACGCCGCCGCTCCCTTCCCCGTTTCCCGACCTCGGGGTGCCCCTCTCCGCCGCGGAACTCCGCGCCACCGCCTACGAGGTCCTCGTCGCCGCCTCCCGCGCCACCGGCGCCAAGCCCCTCACCTACATCACGCAGTCCGCAGCCTCCGCCGCCTCCGCCGCCGCACCCGCCCCCTCATTGTCGTCCTCCATCCACCGCTCGCTGGCGTCGACGGCGGCGGCGAGCAGCAGCAAGGTGAAGAAGGCGCTCGGGCTGAGGAGGTCCTCGGCGTCGTCGTCCTCCAAGCGGCGCGGGGCGCGGCGGCCGGCGACGGTGGCGGAGCTGGTGCGGGTGCAGCTCGGGGTGACGGAGCAGGCCGACGCGAGGATCCGCCGCGCGCTGCTGCGCATCGCCGCCGGCCAGCTTGGTAAACATGCAGAATCTTTGGTTTTGCCCTTGGAGTTCCTGCAGCAGTTTAAAGCATCAGATTTCCTTGATCCGCATGAGTACGAGGCCTGGCAGTTGAGGTACCTGAAGCTTCTAGAGGCTGGTTTACTGTTCCACCCACTTGTTCCCTTAAAAAAATCAGACATTTCTGCACTACGACTGCGCCAAGTAATACATGGAGCTTATGATAAACCAGTTGAAACTGAGAAGAACTCCAAACTCTTGGTGGAGCTGTGCAGTGCTGCCAGGGCGCTTGCTGGCAGATCCCTTATTGAAACTTTTGATGAATGCCACTGGGCCGATGGCTTTCCTTTGAATCTCCATATCTACCAAATGCTGATAGAAGCTTGCTTTGATAGTGAGGATGGTGCTGTGGTTGATGAGATTGATGAAGTGGTGGAGATGTTGACGAAGACTTGGCCTATTCTCGGAATTAATCAAATGTTTCACAATCTCTGCTTTGCGTGGGCACTGTTTAACCATTTTGTCATGTCAGGCCAAGCAGATATCGAGTTGCTGTCTGGTGCAGGAATTCAATTGACTGAAGTTGTAAAAGATGCAAAAACTACAAAAGATCCAGATTACTGTGATGTTTTAATCTCCACTATAAACTCAATAATGGGTTGGACAGAGAAAAGATTGCTTGCTTACCATGAAACATTCAGTGCTAGTAATATTGATTCAATGCAAGGTATTGTCTCAATAGGTGTCTCAACTGCAAAGATTCTTGCCGAAGATATATCTCATGAATACCACCGGAAAAGGAAGCAAGAGACTGACGTAGTAGTACACAGCAAGATAGAAACCTATATAAGGTCCTCACTCCGTACTGCTTTTGCTCAAAAAATGGAAGAGGCTGATTCAAAGCGGTCATCAAGGCACCCTGTGCCAGTTTTGTCAATCCTTGCAAAGGCAATTGGTGACCTTGCTACCAAGGAAAAAACTGTTTACAGTCCAATACTCAAGAAATGGCACCCACTTGCTACAAGTGTTGCAGTTGCAACCCTTCATTCTTGTTTTGGGAATGAGATAAAGCAATTTATAGCTGGGCTAACAGATCTGACACCAGATGCAGCTCAAGTGCTTAAGGCAGCTGACAAGTTAGAGAAGGATCTGGTTAATATTGCTGTCGAAGATTCTGTGAATATTGATGATGATGGCAAATTACTTATCAGAGAAATGCTACCATATGAAGCTGAAAATGTAATGGCAAACCTGGTGAAAGCATGGGTAAAAGAACGCGTGGACAGACTAAAAGGATGGATTGACAAAAATTTGCAGCATGAGACTTGGAATCCAAAGGCTAATGGAGAGAACTTTGCTCCTTCCTCGATGAAGATGATGCAGATAATTGATGACACATTACAGGCGTTTTTTCAGTTTCCCTTAACTATGCACTCCACTCTTCATTCTGATCTAGCAACCGGACTGGACAGAAATATTCAGTATTATGTCTCTAAATCAAAAGCTGGCTGTGGAACCCAGAGTACTCTTATTCCCCAACTACCTCATTTAACAAGATGTGATGTTGGATCCAAATTATTCATGAAAAAGGAGAAGCCACAGGTACTTATGAAGCGTGGATCACAAGTTGGATCAACCACAAGTGGTGCGTCAGTTATCCCTGAACTCTGCGTTCGAATTAATACACTCTATCATGTCCAAACTGAGTTGGAGAGCTTGGAGAAGAAGATTAAAACATACTTCCGAAATGTTGAATCAATTGACCGTAGCACAGATGAGCTGAATATCCACTTTAAGCTCTCTCAGTCAGCCTGCCAAGAAGGCATCCGACAGCTCTGTGAGACATTTGCATACAAGGTGATATACAATGATTTGAGCCATGTCCTTTTGGATTCACTGTATGCTGGTGATACTGCATCAAACAGGGTGGAGCCTTTGTTGAGAGAGCTTGATCCTATCCTTAGGATGGTATCTGGCATACTGCATAATGGTGTGCGGAACCGTGTTATAACATCATTGATGAAAGGTTCCTTCGATGGATTCCTGTTGGTGCTTCTGGCTGGTGGACCTACCCGTGCTTTCACCCTTCAGGACTCTCAGATGATTGAGAATGATTTCAGAGCCCTCCGGAGCTTGTATATAGCCAATGGCCGTGGCCTGCCAGAGGAATTAGTCGACAAGGCGTCCTCAGAGGTGAAGAACATTCTGCCACTCCTACGAACAGACACAGGAACGCTTATTGAGCGGTTCAAGCAAGCAATCTCTGAATCTTGTGGATCTACAGCCAAATCTGGGTTCCCAATGCCTCCAGTACCCGCCCACTGGAGCCCAAGCAACCCGAACACAATTTTGCGAGTTTTGTGCTACCGAAATGATGAGGCGGCTACAAAGTTCCTCAAGAAAGCATACAATCTACCAAAGAAACTTTGA</cdnaseq>

Protein Sequence

<aaseq>MARFFRDSTSSSRSSSDLAAGADASASAATTAASSRTPPLPSPFPDLGVPLSAAELRATAYEVLVAASRATGAKPLTYITQSAASAASAAAPAPSLSSSIHRSLASTAAASSSKVKKALGLRRSSASSSSKRRGARRPATVAELVRVQLGVTEQADARIRRALLRIAAGQLGKHAESLVLPLEFLQQFKASDFLDPHEYEAWQLRYLKLLEAGLLFHPLVPLKKSDISALRLRQVIHGAYDKPVETEKNSKLLVELCSAARALAGRSLIETFDECHWADGFPLNLHIYQMLIEACFDSEDGAVVDEIDEVVEMLTKTWPILGINQMFHNLCFAWALFNHFVMSGQADIELLSGAGIQLTEVVKDAKTTKDPDYCDVLISTINSIMGWTEKRLLAYHETFSASNIDSMQGIVSIGVSTAKILAEDISHEYHRKRKQETDVVVHSKIETYIRSSLRTAFAQKMEEADSKRSSRHPVPVLSILAKAIGDLATKEKTVYSPILKKWHPLATSVAVATLHSCFGNEIKQFIAGLTDLTPDAAQVLKAADKLEKDLVNIAVEDSVNIDDDGKLLIREMLPYEAENVMANLVKAWVKERVDRLKGWIDKNLQHETWNPKANGENFAPSSMKMMQIIDDTLQAFFQFPLTMHSTLHSDLATGLDRNIQYYVSKSKAGCGTQSTLIPQLPHLTRCDVGSKLFMKKEKPQVLMKRGSQVGSTTSGASVIPELCVRINTLYHVQTELESLEKKIKTYFRNVESIDRSTDELNIHFKLSQSACQEGIRQLCETFAYKVIYNDLSHVLLDSLYAGDTASNRVEPLLRELDPILRMVSGILHNGVRNRVITSLMKGSFDGFLLVLLAGGPTRAFTLQDSQMIENDFRALRSLYIANGRGLPEELVDKASSEVKNILPLLRTDTGTLIERFKQAISESCGSTAKSGFPMPPVPAHWSPSNPNTILRVLCYRNDEAATKFLKKAYNLPKKL</aaseq>

Gene Sequence

<dnaseqindica>1..510#1874..2740#3056..3499#3973..4162#4236..5152#ATGGCGCGCTTCTTCCGCGACTCCACCTCCTCGTCCCGCTCTAGCAGTGACCTCGCCGCCGGCGCCGACGCCTCCGCCTCCGCCGCCACCACCGCCGCCTCGTCGCGCACGCCGCCGCTCCCTTCCCCGTTTCCCGACCTCGGGGTGCCCCTCTCCGCCGCGGAACTCCGCGCCACCGCCTACGAGGTCCTCGTCGCCGCCTCCCGCGCCACCGGCGCCAAGCCCCTCACCTACATCACGCAGTCCGCAGCCTCCGCCGCCTCCGCCGCCGCACCCGCCCCCTCATTGTCGTCCTCCATCCACCGCTCGCTGGCGTCGACGGCGGCGGCGAGCAGCAGCAAGGTGAAGAAGGCGCTCGGGCTGAGGAGGTCCTCGGCGTCGTCGTCCTCCAAGCGGCGCGGGGCGCGGCGGCCGGCGACGGTGGCGGAGCTGGTGCGGGTGCAGCTCGGGGTGACGGAGCAGGCCGACGCGAGGATCCGCCGCGCGCTGCTGCGCATCGCCGCCGGCCAGGTGGGCATATCCGTCACCTGTTTGTTGAAATGTAGCATCGTTTATTTTACCTTTTTCTTTAGGTTGCTTGTTTCGGTGGCCATTGCAGTGTCGGTGGGGTTGCACTGTACTGGATCTCAGTTTGTGTTCGTGTTAGTTCCAGACTTTGACTGACCAGTGGGGATGGGACTTCAGTTTTCTTGGTTTACAGATTAGTTTATGGTTGATGTTGCAGTTGACATGTTGCGAACATTCATATTTTATCACGGGAGGGAGCGATTTTTTCTAAGTATGTTTGTTCTATGCTGATATCATGCGGGTTTTTTTTACAGTGCGGTTGCATGGATTAGTGTGTACTGATGTTGCCATGATTGCTGCTTGCTTAGTAGATTAGTATGTGTGTCCTTTGTACTAATTGTTTGGTACTAGATTGCACTCTGTACTTTAATGTTTACTTTATACAATTATAATGTTCTATATTGCTTTAGTATGGGTTTTTCTATGCGCCAGTTATGTGTGGAATGAAGTACTGATGAGTTTTCATATTTATATGGGGTCTCAGTCATGTATATAAGGTAAATCACTTCAATTATTGTGTCTGTCTGTTCTGGTGCATTTTCTCTAATGCAATCAATATGAACATTCTTATGTTTTTTTACCTTCTATTGGCATGCATCCTTTTGTCCGTAGTGCTTTTGTAGGATCCTAAGGCAATACTCTAATACCTAAAATTGGGCGATGATGTTTTACTTGATATGTGCAAAACCTGTGGTGACGGCTTTAAATTTAGGCACCGAGCTTTGTTCCTGATGGTTCTTATACATTTCTTCTGTAACTTGTGTTTTTGTTCTGTTGTGAACTTCAGATCAATGTCTACCTGCCAAATGTGAAATGCTTCTTTACTTTTTAAATGATAGGAAATTTTTAGGTATGTTTTTGTCTGTTCTGAAATTGGTGTGCCACAAATATTCTATATAGGGGAGTGAATTACATTTGTATCGAGAACGTGCTCATAGCGCGGCGGTGTCGTCCTCTGATGTAAGGCCACCGGCCAGGGCTCGAACCCTCGCTCTCACAAAAAAAAGGCCTCTTGCTGTGTACTCCCCAAAATATGTGAGTTAGAACCAGCCTTCGGGCTACGGATCCTCATGCGGGTATGAGCTGGCTGGGCCTTTTCTCGACCTTAGAGAAACGGCTTTGGAACGTCCCTCCTTTAGGGTCGAGTTTTTTTTTATTACATTTATATCAGTATTAATGTGTACAGCTATTGGTAGCCATAGCACTGCCTTGTTCATACAAAACTTTTGACAACCATCTATATTATTTATAAATGAAAATTTCCACTTTAGGTTTAATTTGATCCTTTTTTTAATCCATGAAACAGCTTGGTAAACATGCAGAATCTTTGGTTTTGCCCTTGGAGTTCCTGCAGCAGTTTAAAGCATCAGATTTCCTTGATCCGCATGAGTACGAGGCCTGGCAGTTGAGGTACCTGAAGCTTCTAGAGGCTGGTTTACTGTTCCACCCACTTGTTCCCTTAAAAAAATCAGACATTTCTGCACTACGACTGCGCCAAGTAATACATGGAGCTTATGATAAACCAGTTGAAACTGAGAAGAACTCCAAACTCTTGGTGGAGCTGTGCAGTGCTGCCAGGGCGCTTGCTGGCAGATCCCTTATTGAAACTTTTGATGAATGCCACTGGGCCGATGGCTTTCCTTTGAATCTCCATATCTACCAAATGCTGATAGAAGCTTGCTTTGATAGTGAGGATGGTGCTGTGGTTGATGAGATTGATGAAGTGGTGGAGATGTTGACGAAGACTTGGCCTATTCTCGGAATTAATCAAATGTTTCACAATCTCTGCTTTGCGTGGGCACTGTTTAACCATTTTGTCATGTCAGGCCAAGCAGATATCGAGTTGCTGTCTGGTGCAGGAATTCAATTGACTGAAGTTGTAAAAGATGCAAAAACTACAAAAGATCCAGATTACTGTGATGTTTTAATCTCCACTATAAACTCAATAATGGGTTGGACAGAGAAAAGATTGCTTGCTTACCATGAAACATTCAGTGCTAGTAATATTGATTCAATGCAAGGTATTGTCTCAATAGGTGTCTCAACTGCAAAGATTCTTGCCGAAGATATATCTCATGAATACCACCGGAAAAGGAAGCAAGAGACTGACGTAGTAGTACACAGCAAGATAGAAACCTATATAAGGTCCTCACTCCGTACTGCTTTTGCTCAAGTAAGTTCCAGTTAGGAATCTGTCAAGATTGGTGGTTTCCATTAAGGAGGAATGGTGCAAAGTTACTGCAGTTTTGCTTTTATTCAGTTATTGTCGCTATTTTCCCTCACACACAATGAATGTAACTTGCGTCAACATGCCAGAAACTTGCACATGAAACACTGTTAAATAATTGCCTGATTTTTTTAATGCACATGCTTAGTTGTGGTTCTTTTAAAGTTCTATGAAACACAAGATCTTAATACTGACTGTTTGCCGCTTGTACAAATGCTTATAAGAGTTATTCTTGTCTTTTGTTTGTACTTATTTGTTCAGAAAATGGAAGAGGCTGATTCAAAGCGGTCATCAAGGCACCCTGTGCCAGTTTTGTCAATCCTTGCAAAGGCAATTGGTGACCTTGCTACCAAGGAAAAAACTGTTTACAGTCCAATACTCAAGAAATGGCACCCACTTGCTACAAGTGTTGCAGTTGCAACCCTTCATTCTTGTTTTGGGAATGAGATAAAGCAATTTATAGCTGGGCTAACAGATCTGACACCAGATGCAGCTCAAGTGCTTAAGGCAGCTGACAAGTTAGAGAAGGATCTGGTTAATATTGCTGTCGAAGATTCTGTGAATATTGATGATGATGGCAAATTACTTATCAGAGAAATGCTACCATATGAAGCTGAAAATGTAATGGCAAACCTGGTGAAAGCATGGGTAAAAGAACGCGTGGACAGACTAAAAGGATGGATTGACAAAAATTTGCAGCATGAGGTGAACTTTACACATGCCCAACCTTTTAAGTGCAGCAGTAACGATTACTATAATTTAGTACTTTTTAATCCTTTTATAGTGTTATCCATTATTGAATACTATATGGTAGCCTTCCACAATGCTTCATCATCAGCGATAATGGCTACTACATTTTCCGTTGATGAAAGATATAAAATGCATTTTCCATGGTAAATATTGCATGTTTCATCATGCTGATTTGGTGTATCAATTATCACCATGACTGATAACAAAATCCAACCATGTGATTTATTTCACCCAGAAGTTTTGGTATCTTCATTTTTAGATTGAGGCACTAATATCCGAAAAGCAATTAGATTTTCACCCATTCTCAAATCTGTCAGAAAGCTGATATCAGTTAAATCCCAAGCACTCTATCACAGTATTTTGTGCAATGGTTTTGTAGTCTTACTTCAAAATAGAACATTCCACTAAGTTGGTGAACTACTGTGCAGACTTGGAATCCAAAGGCTAATGGAGAGAACTTTGCTCCTTCCTCGATGAAGATGATGCAGATAATTGATGACACATTACAGGCGTTTTTTCAGTTTCCCTTAACTATGCACTCCACTCTTCATTCTGATCTAGCAACCGGACTGGACAGAAATATTCAGTATTATGTCTCTAAATCAAAAGCTGGCTGTGGTACGTATTAAGGAGAACACTTTTTTTCACGTACAATATACCAATGGTGAATTCTCGTTGTGTTGATTCACAGGAACCCAGAGTACTCTTATTCCCCAACTACCTCATTTAACAAGATGTGATGTTGGATCCAAATTATTCATGAAAAAGGAGAAGCCACAGGTACTTATGAAGCGTGGATCACAAGTTGGATCAACCACAAGTGGTGCGTCAGTTATCCCTGAACTCTGCGTTCGAATTAATACACTCTATCATGTCCAAACTGAGTTGGAGAGCTTGGAGAAGAAGATTAAAACATACTTCCGAAATGTTGAATCAATTGACCGTAGCACAGATGAGCTGAATATCCACTTTAAGCTCTCTCAGTCAGCCTGCCAAGAAGGCATCCGACAGCTCTGTGAGACATTTGCATACAAGGTGATATACAATGATTTGAGCCATGTCCTTTTGGATTCACTGTATGCTGGTGATACTGCATCAAACAGGGTGGAGCCTTTGTTGAGAGAGCTTGATCCTATCCTTAGGATGGTATCTGGCATACTGCATAATGGTGTGCGGAACCGTGTTATAACATCATTGATGAAAGGTTCCTTCGATGGATTCCTGTTGGTGCTTCTGGCTGGTGGACCTACCCGTGCTTTCACCCTTCAGGACTCTCAGATGATTGAGAATGATTTCAGAGCCCTCCGGAGCTTGTATATAGCCAATGGCCGTGGCCTGCCAGAGGAATTAGTCGACAAGGCGTCCTCAGAGGTGAAGAACATTCTGCCACTCCTACGAACAGACACAGGAACGCTTATTGAGCGGTTCAAGCAAGCAATCTCTGAATCTTGTGGATCTACAGCCAAATCTGGGTTCCCAATGCCTCCAGTACCCGCCCACTGGAGCCCAAGCAACCCGAACACAATTTTGCGAGTTTTGTGCTACCGAAATGATGAGGCGGCTACAAAGTTCCTCAAGAAAGCATACAATCTACCAAAGAAACTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027037