BGIOSGA027113

From RiceWiki
Revision as of 07:37, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027113| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027113, complete gene.| tag = OS08G03...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA027113

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027113, complete gene.

LocusTag

OS08G0357000

Ensembl Transcript ID

BGIOSGA027113-TA

Ensembl Protein ID

BGIOSGA027113-PA

Length

3839

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:17408023..17411861

Sequence Coding Region

17411576..17411861,17410292..17410462,17410158..17410207,17410025..17410081,17409846..17409911
,17409670..17409744,17409071..17409189,17408373..17408464,17408023..17408078

Genome Context

<gbrowseImage1> name=IndicaChromosome08:17408023..17411861 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:17408023..17411861 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGGACCAATCCTGTGTCGTGCAGTGATGCAAGCGAAGCTACCTGTCACGATGATCAGCAATTCACTGACCAAGTCTGGGCAGCTTGGAACTGCATTCCTGGGTTCTGTGTGTAAATACAGGAATATCACTGGACTCATTTCCCCAATCTATCAGCCGGCACAAAAGAACTTTGCTCCTGTTTGCGGTAGCTTCAGCTCGTCGTCCGATGGTAATGGATATATGGCTGGAAACTTTAGTGAGAGTGATGAAGATTATGTTAATTCTACTGTGCTAGAAGCAGTTGAGGTGAGAAGTGGGGCAGAGGGATATGTAATCAAGATGCGAGATGGGAAAAACTTGAGATGTGTGCACAATAATTCTCAAGGGAGAAATATTCCAGAAAGCGCACCACAACCTGCTATTGTTTTGAGGATTGAAGATGGAAGTGAAACTTTACTTCCAATCATTGTTTTGGAAATGCCAAGCGTACTTCTGATGGCTGCTATTCGGAATGTCCACATTGCAAGACCAACCATATATCAAGTTGTGAAGGAGATGATTGATAAGATGGGTTATGAGGTAAAACTGGTTCGGATAAATAAAAGAATTCAAGAAGCATACTGTGCTGAACTGTTTCTGACGAAGGTAGGTGACCATACAGAAAGTATCACCTTTGATCTAAGACCTTCAGATGCCATAAACATTGCTGTTCGCTGCAAGGTTCCTATACAAGTCCATAGAAGCCTTGCATACAGTGATGGCATAAGATCAGTCGAGCCAGCAAGAATGGCGATAGCAGCCGGCATGTCTGACGGGTTGTTGTTTACAGAACTTGACAGACCTGATGGGCAGCCATGTGTCGAGGCTCAAGAGTTTGGATTGATCCGGAACATGCTCATTGCAGCTGTTGAAGAGAGATACAAAGACGCTGCAACGTGGAGGGACAAACTGATTCTGCTGAGGTCTAAGCGGAAAAACTGGGCCTGA</cdnaseq>

Protein Sequence

<aaseq>MEGPILCRAVMQAKLPVTMISNSLTKSGQLGTAFLGSVCKYRNITGLISPIYQPAQKNFAPVCGSFSSSSDGNGYMAGNFSESDEDYVNSTVLEAVEVRSGAEGYVIKMRDGKNLRCVHNNSQGRNIPESAPQPAIVLRIEDGSETLLPIIVLEMPSVLLMAAIRNVHIARPTIYQVVKEMIDKMGYEVKLVRINKRIQEAYCAELFLTKVGDHTESITFDLRPSDAINIAVRCKVPIQVHRSLAYSDGIRSVEPARMAIAAGMSDGLLFTELDRPDGQPCVEAQEFGLIRNMLIAAVEERYKDAATWRDKLILLRSKRKNWA</aaseq>

Gene Sequence

<dnaseqindica>1..286#1400..1570#1655..1704#1781..1837#1951..2016#2118..2192#2673..2791#3398..3489#3784..3839#ATGGAGGGACCAATCCTGTGTCGTGCAGTGATGCAAGCGAAGCTACCTGTCACGATGATCAGCAATTCACTGACCAAGTCTGGGCAGCTTGGAACTGCATTCCTGGGTTCTGTGTGTAAATACAGGAATATCACTGGACTCATTTCCCCAATCTATCAGCCGGCACAAAAGAACTTTGCTCCTGTTTGCGGTAGCTTCAGCTCGTCGTCCGATGGTAATGGATATATGGCTGGAAACTTTAGTGAGAGTGATGAAGATTATGTTAATTCTACTGTGCTAGAAGCAGGTACTTTGCCCCTTTTTTGCTTCTTTCTATTTGAATTTTGTGCATTGATGCATTCTATTTTTACCAAACTTTATTCAGTTATCACCTTGAACTTTCATAACCATACGCTCTGTTTTCTTGGTGAAATGAATTGCTTATGGCATCACTAGAGCATTATATCCAAATGACATCTGAATATATTTTTTCCCTTTCATTTCAACTTTAATTTTGTTTGTTGTACAATATTGAAACATCAGTACCAGTAGGATACACTGTTTGTGCACATCAATACATCATATGGATGTTAGTGGTAGTATTATGTTAAGCTGGAACTTGGGATAAAACAGGACATGCATAATTTGGAACAGAGGACTGTAAAAGCCCCATCCCTCGATCGCCAACTTGTAGGCCAGTAAAAATTGTGATATCCTTATAAGTAAATTTGATCGATATTAAAACTATAGTATATGTGCTAGTAAATATAATAAAAATTGTATAGTGGACCACCCATTTAATTGACCTATTACATATAGATGGACCACCTTTACTCTAAATCCTAGCTATGCCACTGTAGGATACGTCCTTGTTCCAGTGAGCTGTGCAGAACTTAACATTATGTCTGGCATGTGTTCTACATTTGAAACTAATATATGATGCTCTTTTGTGGAAGTTGTTTGCCATTATCATTTTTCTTTTAAGTATCTCGAGAGGTTCATACCCACCTGGTTTGTAGAAGTGAATATGTTCTTTCTGGCACTAATTGGTATCTTTTGTACTTTGATAATTCAGTATCATTGTAGAGGTATACACAATCAATCAGAGAGTAAATAGATGTATCTTATTTGCTGGTTTTTTTTTTTTACTTATTACTCCTATTTAACCCAATTTTGTGCTTTAGCATTGAATTGTCATATCATATCGTGTCATGTTGTTCTCATGTAGTGCTGTAGATATCACATATGGGTTTATTGACTAAATATATCCATTTTATAATCTCACTTACATTGAGTTCATTCATAAAAAATAATGAATATCGATGATTGCCCATCAGCTAATCTGTTGATAGCAGTATTCTGGATTTGCTTCTCTCAATAGTTATTTCGACGGTAACCCTTTTTGTTTTTATTCTCCCAGTTGAGGTGAGAAGTGGGGCAGAGGGATATGTAATCAAGATGCGAGATGGGAAAAACTTGAGATGTGTGCACAATAATTCTCAAGGGAGAAATATTCCAGAAAGCGCACCACAACCTGCTATTGTTTTGAGGATTGAAGATGGAAGTGAAACTTTACTTCCAATCATTGTTTGTATGTACAGTTCTTCATTCAATCTAGAAATTTAGTTACAAGTTTTCATTGATTTAATTTTTAATACTATGTACCTTTTTTCAGTGGAAATGCCAAGCGTACTTCTGATGGCTGCTATTCGGAATGTCCACATTGTAATATCTTGTTTTATTACTACAATTTGCTCCTTTTTTTTTGCTTGATGCGATTTATAACCCTTTCTCATTGCAGGCAAGACCAACCATATATCAAGTTGTGAAGGAGATGATTGATAAGATGGGTTATGAGGTAAGGTTACTAGAAATAGTTTATAGTAGTTGTGTTTGGTTACAAATAAGTCAAATTGTACCACTCATTCATTTATTTATTCCTTCCATCATTGTGTTTGATTTTGGTTCCAGGTAAAACTGGTTCGGATAAATAAAAGAATTCAAGAAGCATACTGTGCTGAACTGTTTCTGACGAAGGTACTTATGTAGAGCATTTTTTAAAAAGGAAACTGAACTCAACTTTAGTGTGTACAATACTATCATTAACCATTTTAAACTAGAAACTGCCTATACTGCAGGTAGGTGACCATACAGAAAGTATCACCTTTGATCTAAGACCTTCAGATGCCATAAACATTGCTGTTCGCTGCAAGGTATTATTTTGCCTGTTGAAGTTCATTGCTCTCTTTTATGTCTACTGCCATCAGAGGATGAGAGTTTTACCAAGCAGTTCTCTGATTTTGTCTGTCGCTGCCTCTATTCCTGCTTTCTAATATGGTTCTGTTTTTCAGTTTACACCTTTTTTGTTAATGTTTATTTACTTTATTCTGATGAAGGACCATATTTTTTTTTTCATATTTGCACAGTTTGTGCATAAGATGCTTAATGGTGTCAACTGTCAAGAAACATGCAAACTAGAAGGTTTTAATAGAGTAAATATTTTTTGTGGTTTTGCAAGCCTGGGCGAATATATCAATCTCTTCTGAATTCAGAATCTTTGTATCTCATGAGATCATTTTAATCATACGAGTTAGAATTTAGACCAGTTCTTGCTGCTCACATGATTTAACCGAAGCTATCTATGGAAACAAATAATGTATCTATCCTTACACCATTGGCCTTGACACGAACAGGTTCCTATACAAGTCCATAGAAGCCTTGCATACAGTGATGGCATAAGATCAGTCGAGCCAGCAAGAATGGCGATAGCAGCCGGCATGTCTGACGGGTTGTTGTTTACAGAACTTGACAGGTATTGTTATGGAAATCTATTTACGACTGTGTTGAATTCATGAAAGCACAATGTTGCAGTAGTACTGGAATTCTTTGTTCTACTTTCACTGGTTTGTGCGCTGACACCTTTTGTCACCTGAACACAAAAATATGCACTTAACTATAACATAGACGAGAACTGTGGTAACATATCTTTATGACGTGGTTCAAAGCAATTATTGTACTCCCTCCATTGAGTTATATTTTGTAGATTTTTACCAACATTTAGTCAAATTACAAGAGATGTTGTAGCTTGGCCAACCTTTCCTTTCTCATAGGAATGTTGAGAGCAGAGCAATGAAAATTCAGTGTATAAAAACTGTGCCAATAGATGTGCATTTTAACAGCTTACAATGATGAAAGTACAGTCTTGAAGATTTTTGTTTAAAATCAAAATATGCCTGATAAAAATCATTGGAGGTACTAGCTTGCAAGGGCAGAGTTACTAATCAGGTTATACTGGTCTTGCTCTACATTTTGATGCCCTTTCTCCTTAAGGAGATTATGCGCTGACTTACAAATTAAGATGCTGAACTTTATCCATCCACATGTATGTTTATTTTTCTTACACATGGCACTTTATCAGACCTGATGGGCAGCCATGTGTCGAGGCTCAAGAGTTTGGATTGATCCGGAACATGCTCATTGCAGCTGTTGAAGAGAGATACAAAGACGCTGGTAATTTTATTATCATGTTGTGGTTTTATTAAGATTCATCGATGCACCTTTTTTTTTTTTTGCGGGGAAGATTCATCAATGCATTCTATCTGACAAGGACTAGTGTTGTATCGTATTCGTGAGATCATTCTAAATGTTAAAGGAACATAATTTGTACTTTGCAAAGGAACAAAGCAACTAAACATCACCTAATATGACAACAGCAAGTTGCTGGTGCAAACAATGCTAATCTCATACAGTAATATGCAGAAAAAAAAAGCTAGTGGTTTTGAAAAATCGACATTGTTTTTACAGCAACGTGGAGGGACAAACTGATTCTGCTGAGGTCTAAGCGGAAAAACTGGGCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027113