BGIOSGA027129

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Revision as of 07:37, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027129| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027129, complete gene.| tag = P0404D1...")
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Gene Name

BGIOSGA027129

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027129, complete gene.

LocusTag

P0404D10.12

Ensembl Transcript ID

BGIOSGA027129-TA

Ensembl Protein ID

BGIOSGA027129-PA

Length

4351

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:16886248..16890598

Sequence Coding Region

16890583..16890598,16890362..16890451,16889923..16890048,16886646..16886744,16886415..16886549
,16886248..16886291

Genome Context

<gbrowseImage1> name=IndicaChromosome08:16886248..16890598 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:16886248..16890598 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCACCGCTACGGGAACTTCAAAGCCTGTGGCTACCCTGGGTGGAGGTGGCTCCTCCTCTGGAGTGTCGACCACGGGCACTAATCAGGGAGGGGACGATAGAGCTACAGGCACTTCTCACCCAGTCCCAGCAATGAGCTTCACAGGAGGGCTAGCACAGAGCATGTCTCATTACATTTACACAACATCAATTGGTCAGGCAGGTGGCTGCCACAAGGGAAAAGTGAAAGGGTATTCGAACTCCAAGCCGAATCAGCAGGGAACAAAAAACTACGGCAACTCCTACAAAGAAAACAACGCCCAATCAACTGCTTCATCGTATTACAATGGATCTGCATCCAAGGGTAGTTCGACTGGCAGGATGCCGGAGCAGCAAAACTCAGATCATCAGTACTACATTAGCAGCATGAGCAGCAATCACGGCCAACAGGGAGGTGGTGGAGCGGAGAACAGCACCTACACAAGCAAGAGCATTAGGACGAAGAAGTTCCCGTCACTCAACGGCTGA</cdnaseq>

Protein Sequence

<aaseq>MATATGTSKPVATLGGGGSSSGVSTTGTNQGGDDRATGTSHPVPAMSFTGGLAQSMSHYIYTTSIGQAGGCHKGKVKGYSNSKPNQQGTKNYGNSYKENNAQSTASSYYNGSASKGSSTGRMPEQQNSDHQYYISSMSSNHGQQGGGGAENSTYTSKSIRTKKFPSLNG</aaseq>

Gene Sequence

<dnaseqindica>1..16#148..237#551..676#3855..3953#4050..4184#4308..4351#ATGGCCACCGCTACGGGTACGATCTTCCAAACCTCTGTGCATATATGTGCAGATATGTTCACTAGTACAAAATTGCTATATTTTACGACGGCAGTATTACTTTTGTAGCTAATTAACTGTTCACTCATGCAATAATTATTCTTGCAGGAACTTCAAAGCCTGTGGCTACCCTGGGTGGAGGTGGCTCCTCCTCTGGAGTGTCGACCACGGGCACTAATCAGGGAGGGGACGATAGAGGTTAGCTCTAGCTTGTCATCGTTGAATTGGTTGATCAAACAGTTGATTTTAATTATTTGCTTTTTCTATAAGTATATATACCGTGTGAAATAATTCAATTGCTGCTTGAGTTATTTTTATTTCTATCTTAAAATGTAAAAATTAATAGCTCATCAAACCTATGCATATATATACTTGAAAACTATATGTAATTAAATATATATATCCAAAATTAACGTTACTAATGGAAAAAATAATTAATGAAGGTAGCTAGTAGCAAAAGAGATGAGCTAGGTAGGTGACTGATGCTGGGTTTAATTTCGTGGTGTTGTAGCTACAGGCACTTCTCACCCAGTCCCAGCAATGAGCTTCACAGGAGGGCTAGCACAGAGCATGTCTCATTACATTTACACAACATCAATTGGTCAGGCAGGTGGCTGCCACAAGGGAAAAGTGAAAGGTAATTAACCTAATATATATGCAAATAATCATATATATCTATCCTTTTATATTATTTATTCGCGACCTTGTTGAGCTTTTCAATCCAGAACTAACTTTACATTTTGGCAGGAGAGCGCGAGTAGCCAGCAAACCAACAAGGAGTACTGACAATTCGTTGTTATCCATGAATGCGATGGCAGAGGCTGCACATACTCAATCCTATTGTAAAAAACTCGTGTATATATACGAATTTAAATTTGTTCGTGTCTGATAAGCTCGTGTGAATAAATAATGGTGTAATTTCTAGGAGCTACGCGTCGTACCAAGATTTCCAGGAAGTCAGCAAAATTAGGTGGATCAATGTATATACACTTAGGAATGTAAATTTGTTTGTTCAATAAAATTTGTTTGCTCATATGTGTATACCCCGAGACTAGGGATCAAAGAAACGGCTCGAAAACATACAGAAACTACTGCTACCATATATATTTTCAGTTTTTATCTTTGGAATCGGAACCAGAAACAGAAACTAGGGATACCAAAAGGAAATCAAATATCATCAAATAAAAATACAGAGCAAATACGAAACGAAACAAATATGGTCACGAATATTTATTGGAACATCAAACAAACCCATTAGAGCATGTACAATAACAAACTATTAGCCAGCTATAAACATATTTTAATGAGATAAAAGATGAGAGGGAAGAGGAGCGGTCTACAGATATGTAGCCAGCTGCAGCACGGACTCTAAGACGCAGTGTGTGTATGACATGTGGGACCATATATTAATAGTATAGTAAATGATTATTGTATGAATTGGCTATTAGATTGGCTATAGATGAATTGGAGCCAGTAGTGGGCTATACTATTAAACTTTCTCTTACAATGTGCTTGCAAAAACAACAAAGGCATATAATTAGTTCATTTATCCAAAAGAATATACCAAATTCATGTTAAAGATAATATGCCATTGTAAATTAGACTCTTTAGTTCTTTAAACTTTTAAAAAACTAGAATTATAAATACGAAGCTGTATCCATATATATTAGAATCTCAATTTATAATTTTACTTATTTAATTCAGAAATTAGTAATTAAAAAATATAATTGATGACAACACCTCTTTTAATGAGACTTGCTCTGTGCTAGATTTATTTATGTTTTCGGAACTAAGGCAAAAAAGACTGACACTATCCATTTTGGGTAGACGTACATTTGTTAGAAACTTACTTTCCCGACTCACTTCTCTTATTTTACATGTCTACGCTTTTCAAATTGCTAAATAGTGTGTTCTTTGCAAAAAAAAAATTATATGAAAGTTGACTTTAAAAAATCATATTGATTCATTTTTTTTAAAAAAGAATAGGTATTACTTAATAAAGCACGTACTGCTTTGTTTTGCGTGAAGGAGGGATTTATTCCCAACCACAACCGATTTCATCCCTCCATTTTTTTATGCCATTGATTTTAAAAATACATTTGGACCGTTTGTCTTATTAAAATATTTTTATAAATATATAAAATATGTCATTCTTAAATTATTTGTAGCGATACAAATTACACCACAGTAATTTTTTTTAATATGACGAATGTTAAAAACAGAGGTTAAAAAATGAACTGTGTCAAAGATAGAAAAACGGAGAGAGTATTAGTTTTTCTTTTAGTAGAATATTACCTGACCATGGAGTATTCCATCGTTAGATGCGCTGTTGCAACACATGTGCCAGGGAGTTAATTAATCTTGGTCTAGGCGTGGAAGTTAATATTATTACTACGAAGCAATTTCACAACGGAAACCCGATGGAAGTTTACGTGTAATATTTATGTAGCTGATCATTTATGTGATGTTGAGTTAGTAAAATACAACTACTATAAAATATCATTTTTTTCATTAGCATGCTTTTTGTCTGCCGCTAATATGCTTAGTTAACTTGGAGTTTGGAATGGGGCTAGTAGTTGTGTTTATTCAAAGTATTTTGACTTCTAAATTCCACGAGAAATTAATGTCCAGGAAATTGTGTCAAATTAAATCGCTGACATGAAACAGAAAGAGTTGGTCACCGTGCAGAATTACCTGCGTTTTACACTAACCTCTCTGTTTTTTTTTCTTGCCGACATTGTCCGGTCTAATGGCAGTAGAAACCACAGGGAAAAAATACATGCAAGTTCGTATCCCTTCATTGATTACTTAAATTTGCTTCCAATTCGGTTACTATGTGGTATGGTTACGAAGTATTCTGATGACTTCCATGGGAAATGTCCATGAGTATTCAGTAAGGCTTGAACATTATAAATAAATTATATCGAAACTACCGATCAACACGGAAACTAACCGTCCATGCATGATTTAAACTTAACTTAGCATCGCCCGTTTGGCTGGAACATGGCGGGAAAAACTGTAGAATTAGCTCAGAGCTTGCAGCGCTATATCGCGATTTGCGTTGAAAGTTTCTTTAATTTGCTGGCTGAAACCGTCTAAACAGCTAACAGATCGATCGAGGAGTTCACCACAACGCAACACGGTATTGAACAAAAAAATGAAAAATATACTCCTATGTCAAAACACTAGCTAGGCGTACCCATGTGACCATTGTAAACGTTCCCCAGCAAACTGAAAATTTGTGACTTGTACGTACACGTACTCTCAGCTAATGGCATGCATATTCTTGGAAACAGGAGGTTGCTTCAGGAGAGCAATAATATTGTCAAGAACTAGAAGGAGGCCAAAACGACTGTAAATAAGGTGCATTCAGTGAATGTTCCCAGGATTTTGATTGTCTTAGGTTGAGATCGATCCTATATAAACTCAACAGATGTACTTGCTCTCAACAATAATCCCCTTCGATCAAGCATTTACAAGAATCTCGATCAGAATGGACTACTACTCAAAAGGTGACTAGTATTAACTTCTTGATCAAATTAACAATATTGTACTGTATTTTATATATGAAATTTGCTCCAGTCAAGAAAAAGTATCTCGAGGTACCGGTACCACACGATGCTATATCGTTTCCGATCGTTGGATCTAGCTGAGCGGGATGGGCACGGTTAGATCCAACGATCGGAAACGATTTGATACTGTGAGGTACCGGTACCTCAAAATACTTTTTGTTGAACCGGAGCAAATCTCTTTATATATATAGCTATTTTGTATGAATAAACTAGCTCTCTAACTCAATGAATCCATGCATGCAGGGTATTCGAACTCCAAGCCGAATCAGCAGGGAACAAAAAACTACGGCAACTCCTACAAAGAAAACAACGCCCAATCAACTGCTTCATCGTATTACAATGGTAGTTAGTAATTAGCTGATATAAACAGTACATTGTATTATTACACCCTGCAATTCTTCATATCATATGTTTTTTTACGCTATTAATTTTGTGCAGGATCTGCATCCAAGGGTAGTTCGACTGGCAGGATGCCGGAGCAGCAAAACTCAGATCATCAGTACTACATTAGCAGCATGAGCAGCAATCACGGCCAACAGGGAGGTGGTGGAGCGGAGAACAGCACCTACACAAGTGAGCAAAAGAAAAATTAAGCCTCACTAATTTAGACTTATATATAGATGCATGTGAAATAGTTATTAATTAGTTTGGCTAATACCCTGTCTCTGCTTGTCAATATGTGTTTTTTCTTCCTAGGCAAGAGCATTAGGACGAAGAAGTTCCCGTCACTCAACGGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027129