BGIOSGA027153

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Revision as of 07:38, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027153| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027153, complete gene.| tag = OsI_288...")
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Gene Name

BGIOSGA027153

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027153, complete gene.

LocusTag

OsI_28856

Ensembl Transcript ID

BGIOSGA027153-TA

Ensembl Protein ID

BGIOSGA027153-PA

Length

4146

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:16232996..16237141

Sequence Coding Region

16236849..16237141,16236254..16236383,16234690..16236193,16233514..16234596,16232996..16233417

Genome Context

<gbrowseImage1> name=IndicaChromosome08:16232996..16237141 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:16232996..16237141 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGAATCTGCACCACCCCGCTTCGTTTGGTGATGCGTCTATGGAGGACACCAGCAGCCAACATAAAAGGACTCTGGATCAGTCAGGAGCCAAGCAACAAGGTAGAGTCCAGCAAGCTTTGCTAGAATATAACCGGCAAACAGAGGAACATAAACAACTGCAGGTGACACCGGGTAACACAGCACGGGCTTTGAAGCGTTTCAGGAAGGATGCAGGGGAGGCCGCCGAGGTGGATGACATGGAAGCAACCAGCCCTGGGGCTGCTGGTCAACTGATGGGTCCTGTGATAGGGAATCCGAGAAGTGAACCACAGATGCAAGCTTTCAGAGATGTTCTGCATGACTGTGAGCTCCATGATCTTGGTTTTACAGACCTACCCCACACTTATGATAATAAGAGAGATGGATGGCACAATGTGAAGGTAGTTCACCTAGTGTCCCCTTGTTCTGACCATGCCCCTATCCTGCTCAAACTGTCAGTGGAGGAGAATGTACAAGTGAGACAGAAATTTTTGCACTATGAGATTGTTTGGGAAAGAGAACCGGAAGCAGCCCAAGTAATAGATGAGGCTTGGTCTAATGCAGGGGAGAAAACAAATCTTGGGGATATAAATAAGGCCCTTGGGAAGGTTATGTCAGCCTTTAAATCCTGGAGTAATACCAAAGTTAAAAATGTTTGTAGAGAGTTGGAGAAAGCAAGGAAGAAGCTGGTGGAATTAATGCAGTCCAATGCAGACAGAATCCAAATTCGCCAGGCCACTGATCACATGAATGAGATGCTTTATAGGGAGGAGATGTTGTGGCTGCAGCGATCCCGTGTTAATTGGTTGAAAGAGGGGGATAGAAACACACGCTTTTTCCACAGTCGGGCTGTTTGGCGAGCAAAGAAGAACAAAATTACTAAATTGAGAGATGCCGAAGGTACTGTTCAGAAATCGACAACGGTGTTGGAAGATATGGCGACTGAATATTTTGAGAAGGTGTACACGGCTGACCCAAACCTGGACCCTGAATGTGTCACTCGGTTAATCCAGGAGAAAGTCACAGAGGAGATGAATGCCAAACTATGTGCTGATTTCAACGATGAAGAGATTGCACAAGCGTTGTTCCAAATCGGTCCACTGAAATCCCCTGACCCGGATGGTTTCCCGGCTAGGTTTTACCAGCGAAACTGGGGAACGCTTAAAGCAGATATAGTTGGTGCCGTGCGTGATTTCTTCCAGACCGGTCTAATGCCGGAAGGTGTAAACAATACTGCAATTGTTCTTATACCAAAAATTGAACAACCTTTAGAGTTGAAGGATTACAGGCCAATAAGTCTCTGCAATGTGGTGTATAAAGTGGTTTCGAAATGTCTGGTTAACAGACTCCGTCCAGTTCTTGATGAGGTGGTGTCAGAGGAGCAAAGTGCTTTTATCCAGGGTCGCATGATAACTGATAATGCACTGCTTGCATTTGAATGTTTTCATGCAATTCAGAAAAACAAAGTGGCTAACAAGGCGGCTTGTGTTTATAAATTGGATCTCTCAAAGGCTTATGACAGAGTTGATTGGCGATTTTTGGAGATGGCAATGAAAAGGCTGGGTTTCGCTCACCGATGGGTCAGGTGGATTATATCATGTGTGACTTCGGTGAGATATTCTATTAAATTCAATGGAACCCTTCTCCATTCCTTTGCTCCAAGTAGGGGCCTGAGGCAAGGGGACCCGTTATCGCTATTTCTTTTTCTGTTCGTGGCTGATGGGTTATCACTTTTGTTAAAGGGAAAGGTGGAACAAAATATCCTAACGCCTATCAAGTTTTGCCGGAATGCTCCTAGTATATCTCATCTTATGTTTGCCGATGATACTCTTCTGTTTTTCAAGGCAGAAGTCCGTCAGGCTGAAGTGGTGAATGAGGTTCTTCAGTGCTATGCTCGGGGTACGGAGAAAGATAAATTTGAAGATAAATATTTAGGCTTCCCCACACCAGAAGGAAGAATGCATAAAGGACGATTTCAGACCCTGCAAGCCAAGATATGCAAGAGAGTGATCCAATGGGGTGAGAATTACCTATCCAGTGGTGGCAAAGAAATTCTAATTAAAGCTGTCATCCAAGCTATTCCTGTTTATGTGATGGGGATTTTCAAACTTCCAGACTCGATATGCGAAGATTTAACGAGACTGACAAGGAATTTTTGGTGGGGTGCAGATAACGGCCAAAGGAAAACGCACTGGAGAGCTTGGGAGTCCCTGACAAAACCTAAACGAAATTGTGGTTTAGGTTTCAAGGACATTAGGCTTTTTAACCAAGCCTTGCTGGCTCGCCAAGCGTGGCGGTTGATTGAATTTTCGGACAGCCTTTGTGCCAAGGTGCTCAAAGCGAAGTATTTCCCTCATGGCTCTCTGATTGACACGACTTTTGGTCCCAACGCCTCCCCTGCTTGGCAAGGGATGGAACATGGGATAGATATTTTGAAGAAGGGGATAATTTGGAGAATAGGTAATGGCAATGCAGTTCGAATATGGCGTGATCCTTGGTTGCCAAGAGATCATTCCAGATGGCCAATTATTTTGAAAAGGAATTGCAGGCTGAAATGGTTTTCTGATCTTTTAGATCAAGATGGATCCTGGAATGCTGAAAAGATTAACCGTTACTTCCTGAAAGTCGATGCAGATGTTATTTACAAGATCTGCACCTCCCCCAGAGTTGAATGTGATTTCCTAGCATGGCACCCGGACAAGACAGGGCAGTTCTCTGTTAGGAGTGCTTATGCACTGGCAGCCAACCTGGCAAATATGGAAGTGCCTTCAAGCTCCTCTACAGCTACTGTGAACAAAGCCTGGGATTTAATTTGGAAATGTAATGTTCCGCAGAAGGTGCGGATTTTTGCTTGGAAGGCCGCATCTAACAGTCTGCCAACTATGGTAAAAAAGAAGAAAAGAAACCTGGAGAAAACGGATATGTGCCCCATCTGTGATAGGGAAAAAGAGGATGCAGGCCATGCACTATGTCGCTGTATCCATGCTGGCTTGTCAGATTATGATAGAGCTTTGTTCCTGATGACTCTCTGGCGAAATTGGCATGTGAGAAATGAGATCACACATGACAAGGTGGTGCCACCAGTGGAGGCTTCTCAGCGCTTTATTCAGAGTTATGTGGACACTATGTTTCAAATTCGTCAGGATCCTGTAGCAAAGCTGGCAAAAGGCAAGTTGGTGCTAAAAGTGGGCAATGTGAAACAACATACCCAGACTACCTGCAAGCCTCAACCTCGCTGGGAAAGACCAAGCAACGGCTGGATGAAGCTTAATATAGATGGATCCTTTGACAGCAAAACAGAGAATGGAGGAATCGGGGCAATCCTTAGAGACAGCTCCGGCAAGCCCATTTTCGCTTGTTGCAAGCCTCTGCAAAAATGCTCCGCCGATGGAATGGTGAAAGCTTTCTAG</cdnaseq>

Protein Sequence

<aaseq>MVNLHHPASFGDASMEDTSSQHKRTLDQSGAKQQGRVQQALLEYNRQTEEHKQLQVTPGNTARALKRFRKDAGEAAEVDDMEATSPGAAGQLMGPVIGNPRSEPQMQAFRDVLHDCELHDLGFTDLPHTYDNKRDGWHNVKVVHLVSPCSDHAPILLKLSVEENVQVRQKFLHYEIVWEREPEAAQVIDEAWSNAGEKTNLGDINKALGKVMSAFKSWSNTKVKNVCRELEKARKKLVELMQSNADRIQIRQATDHMNEMLYREEMLWLQRSRVNWLKEGDRNTRFFHSRAVWRAKKNKITKLRDAEGTVQKSTTVLEDMATEYFEKVYTADPNLDPECVTRLIQEKVTEEMNAKLCADFNDEEIAQALFQIGPLKSPDPDGFPARFYQRNWGTLKADIVGAVRDFFQTGLMPEGVNNTAIVLIPKIEQPLELKDYRPISLCNVVYKVVSKCLVNRLRPVLDEVVSEEQSAFIQGRMITDNALLAFECFHAIQKNKVANKAACVYKLDLSKAYDRVDWRFLEMAMKRLGFAHRWVRWIISCVTSVRYSIKFNGTLLHSFAPSRGLRQGDPLSLFLFLFVADGLSLLLKGKVEQNILTPIKFCRNAPSISHLMFADDTLLFFKAEVRQAEVVNEVLQCYARGTEKDKFEDKYLGFPTPEGRMHKGRFQTLQAKICKRVIQWGENYLSSGGKEILIKAVIQAIPVYVMGIFKLPDSICEDLTRLTRNFWWGADNGQRKTHWRAWESLTKPKRNCGLGFKDIRLFNQALLARQAWRLIEFSDSLCAKVLKAKYFPHGSLIDTTFGPNASPAWQGMEHGIDILKKGIIWRIGNGNAVRIWRDPWLPRDHSRWPIILKRNCRLKWFSDLLDQDGSWNAEKINRYFLKVDADVIYKICTSPRVECDFLAWHPDKTGQFSVRSAYALAANLANMEVPSSSSTATVNKAWDLIWKCNVPQKVRIFAWKAASNSLPTMVKKKKRNLEKTDMCPICDREKEDAGHALCRCIHAGLSDYDRALFLMTLWRNWHVRNEITHDKVVPPVEASQRFIQSYVDTMFQIRQDPVAKLAKGKLVLKVGNVKQHTQTTCKPQPRWERPSNGWMKLNIDGSFDSKTENGGIGAILRDSSGKPIFACCKPLQKCSADGMVKAF</aaseq>

Gene Sequence

<dnaseqindica>1..293#759..888#949..2452#2546..3628#3725..4146#ATGGTGAATCTGCACCACCCCGCTTCGTTTGGTGATGCGTCTATGGAGGACACCAGCAGCCAACATAAAAGGACTCTGGATCAGTCAGGAGCCAAGCAACAAGGTAGAGTCCAGCAAGCTTTGCTAGAATATAACCGGCAAACAGAGGAACATAAACAACTGCAGGTGACACCGGGTAACACAGCACGGGCTTTGAAGCGTTTCAGGAAGGATGCAGGGGAGGCCGCCGAGGTGGATGACATGGAAGCAACCAGCCCTGGGGCTGCTGGTCAACTGATGGGTCCTGTGATAGGGTCCCGTCAGGAGAAATGAATTGCTTATCGTGGAACTATCACGGAGCGGGAATGCCGCGATAGTTTGTGATCTCTGTGCCATAACCAGAGAGGCACGTTCGCATCTGGTCTTCCTGTGTGAGACAAGACAAAGTGTGGAAAAGATTAGTAAGTTACGTAGGAGATTGGGTCTTAGTGGTTTTGTGGGAATAAGTAGCGAAGGGATGAGTGGTGGTCTTGCTTTATTTTGGCATGAATCTGTTTATGTTGATATTAAAGAGATAATAAAAGATATATTGATGTGTATGTGCGTTTGTCCCCTGATAATCTGCTGTGGCATGCTACCTTTGTTTATGGAGAACCTCGGGCAGAGAACAGACATAATATATGGTCGTTGTTGAGGAAAATCAAACTGAATTCAGATTTACCTTGGACTGTTATAGGTGATTTTAATGAAACCCTTTAGCAGTTTGAACATTTCTCCAGGAATCCGAGAAGTGAACCACAGATGCAAGCTTTCAGAGATGTTCTGCATGACTGTGAGCTCCATGATCTTGGTTTTACAGACCTACCCCACACTTATGATAATAAGAGAGATGGATGGCACAATGTGAAGGTTCGGCTTGACTGAGTAGTTGCTGATGATAGATGGAGGGATATATTTTCATCAGCTCAGGTAGTTCACCTAGTGTCCCCTTGTTCTGACCATGCCCCTATCCTGCTCAAACTGTCAGTGGAGGAGAATGTACAAGTGAGACAGAAATTTTTGCACTATGAGATTGTTTGGGAAAGAGAACCGGAAGCAGCCCAAGTAATAGATGAGGCTTGGTCTAATGCAGGGGAGAAAACAAATCTTGGGGATATAAATAAGGCCCTTGGGAAGGTTATGTCAGCCTTTAAATCCTGGAGTAATACCAAAGTTAAAAATGTTTGTAGAGAGTTGGAGAAAGCAAGGAAGAAGCTGGTGGAATTAATGCAGTCCAATGCAGACAGAATCCAAATTCGCCAGGCCACTGATCACATGAATGAGATGCTTTATAGGGAGGAGATGTTGTGGCTGCAGCGATCCCGTGTTAATTGGTTGAAAGAGGGGGATAGAAACACACGCTTTTTCCACAGTCGGGCTGTTTGGCGAGCAAAGAAGAACAAAATTACTAAATTGAGAGATGCCGAAGGTACTGTTCAGAAATCGACAACGGTGTTGGAAGATATGGCGACTGAATATTTTGAGAAGGTGTACACGGCTGACCCAAACCTGGACCCTGAATGTGTCACTCGGTTAATCCAGGAGAAAGTCACAGAGGAGATGAATGCCAAACTATGTGCTGATTTCAACGATGAAGAGATTGCACAAGCGTTGTTCCAAATCGGTCCACTGAAATCCCCTGACCCGGATGGTTTCCCGGCTAGGTTTTACCAGCGAAACTGGGGAACGCTTAAAGCAGATATAGTTGGTGCCGTGCGTGATTTCTTCCAGACCGGTCTAATGCCGGAAGGTGTAAACAATACTGCAATTGTTCTTATACCAAAAATTGAACAACCTTTAGAGTTGAAGGATTACAGGCCAATAAGTCTCTGCAATGTGGTGTATAAAGTGGTTTCGAAATGTCTGGTTAACAGACTCCGTCCAGTTCTTGATGAGGTGGTGTCAGAGGAGCAAAGTGCTTTTATCCAGGGTCGCATGATAACTGATAATGCACTGCTTGCATTTGAATGTTTTCATGCAATTCAGAAAAACAAAGTGGCTAACAAGGCGGCTTGTGTTTATAAATTGGATCTCTCAAAGGCTTATGACAGAGTTGATTGGCGATTTTTGGAGATGGCAATGAAAAGGCTGGGTTTCGCTCACCGATGGGTCAGGTGGATTATATCATGTGTGACTTCGGTGAGATATTCTATTAAATTCAATGGAACCCTTCTCCATTCCTTTGCTCCAAGTAGGGGCCTGAGGCAAGGGGACCCGTTATCGCTATTTCTTTTTCTGTTCGTGGCTGATGGGTTATCACTTTTGTTAAAGGGAAAGGTGGAACAAAATATCCTAACGCCTATCAAGTTTTGCCGGAATGCTCCTAGTATATCTCATCTTATGTTTGCCGATGATACTCTTCTGTTTTTCAAGGCAGAAGTCCGTCAGGCTGAAGTGGTGAATGAGGTTCTTCAGTGCTATGCTCGGGGTACGGGTCAGCTTGTTAACCCAGTAAAGTCTTCAATCATGTTTGGGGCGGCTACTCCGTCATAGCAGAATTTAGCCATCCGTAATACTTTGCGAATAGAGAAAGATAAATTTGAAGATAAATATTTAGGCTTCCCCACACCAGAAGGAAGAATGCATAAAGGACGATTTCAGACCCTGCAAGCCAAGATATGCAAGAGAGTGATCCAATGGGGTGAGAATTACCTATCCAGTGGTGGCAAAGAAATTCTAATTAAAGCTGTCATCCAAGCTATTCCTGTTTATGTGATGGGGATTTTCAAACTTCCAGACTCGATATGCGAAGATTTAACGAGACTGACAAGGAATTTTTGGTGGGGTGCAGATAACGGCCAAAGGAAAACGCACTGGAGAGCTTGGGAGTCCCTGACAAAACCTAAACGAAATTGTGGTTTAGGTTTCAAGGACATTAGGCTTTTTAACCAAGCCTTGCTGGCTCGCCAAGCGTGGCGGTTGATTGAATTTTCGGACAGCCTTTGTGCCAAGGTGCTCAAAGCGAAGTATTTCCCTCATGGCTCTCTGATTGACACGACTTTTGGTCCCAACGCCTCCCCTGCTTGGCAAGGGATGGAACATGGGATAGATATTTTGAAGAAGGGGATAATTTGGAGAATAGGTAATGGCAATGCAGTTCGAATATGGCGTGATCCTTGGTTGCCAAGAGATCATTCCAGATGGCCAATTATTTTGAAAAGGAATTGCAGGCTGAAATGGTTTTCTGATCTTTTAGATCAAGATGGATCCTGGAATGCTGAAAAGATTAACCGTTACTTCCTGAAAGTCGATGCAGATGTTATTTACAAGATCTGCACCTCCCCCAGAGTTGAATGTGATTTCCTAGCATGGCACCCGGACAAGACAGGGCAGTTCTCTGTTAGGAGTGCTTATGCACTGGCAGCCAACCTGGCAAATATGGAAGTGCCTTCAAGCTCCTCTACAGCTACTGTGAACAAAGCCTGGGATTTAATTTGGAAATGTAATGTTCCGCAGAAGGTGCGGATTTTTGCTTGGAAGGCCGCATCTAACAGTCTGCCAACTATGGTAAAAAAGAAGAAAAGAAACCTGGAGAAAACGGATATGTGCCCCATCTGTGATAGGGAAAAAGAGGATGCAGGCCATGCACTATGTCGCTGTATCCATGCTGGTCAGTTGTGGTCCCTGATGCATAAATCAGGATCAATTTCCTTGGATATTCAGTCGATCCAATTTGACCATTCTTGGTTGTTTAATTGTTTGTAAGGCTTGTCAGATTATGATAGAGCTTTGTTCCTGATGACTCTCTGGCGAAATTGGCATGTGAGAAATGAGATCACACATGACAAGGTGGTGCCACCAGTGGAGGCTTCTCAGCGCTTTATTCAGAGTTATGTGGACACTATGTTTCAAATTCGTCAGGATCCTGTAGCAAAGCTGGCAAAAGGCAAGTTGGTGCTAAAAGTGGGCAATGTGAAACAACATACCCAGACTACCTGCAAGCCTCAACCTCGCTGGGAAAGACCAAGCAACGGCTGGATGAAGCTTAATATAGATGGATCCTTTGACAGCAAAACAGAGAATGGAGGAATCGGGGCAATCCTTAGAGACAGCTCCGGCAAGCCCATTTTCGCTTGTTGCAAGCCTCTGCAAAAATGCTCCGCCGATGGAATGGTGAAAGCTTTCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027153