BGIOSGA027239

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Revision as of 07:39, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027239| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027239, complete gene.| tag = OsI_286...")
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Gene Name

BGIOSGA027239

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027239, complete gene.

LocusTag

OsI_28675

Ensembl Transcript ID

BGIOSGA027239-TA

Ensembl Protein ID

BGIOSGA027239-PA

Length

3823

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:13298173..13301995

Sequence Coding Region

13301789..13301995,13301106..13301171,13300843..13300935,13300182..13300274,13299882..13300103
,13298802..13298873,13298481..13298552,13298173..13298268

Genome Context

<gbrowseImage1> name=IndicaChromosome08:13298173..13301995 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:13298173..13301995 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTGCTGTCTCTGCAACACTCTGCCTCCGTTGCCACAATTCCACGCCATCAACAGTGGGGACCACCTTCACCAGAGATCTCAAGGAGGCGCTCGGTGCTCTGCCACGCCGGAGAGCTCAAGGCGGCTGTTGCTGGGAAACACTGGTGTCGCCACCGTTGTGAACATGCGGTTCCCTGCCCATGGTCCCCTGATGGCAGCGGATTGAATTGCCTCTCCGGATGGCTGATTTTGGAGTCCTTCACAGGAATGAGCTTAGTGGTGCACTTACAGAGACCAGAAAAGTACTTAGGTGATATTGAAACCTGGAACAAAGCAGAGCAACAGCTGACAGAAGCCTTAAATGAGTTTGGAAAGCCATGGCAGATCAATGAAGGTGATGGTGCCTTCTATGGTCCAAAAATTGATATTGGTGTGTTTGATGCCCTCAAGAGGAAATTTCAGTGTGCAACTCTACAGCTCGATTTTCAGCTGCCCCTACGCTTCAAGCTGACTTACTCTGCAGAGGATGAAGCCAAACTTGAGAGGCCTGTGATGATTCACAGGGCAATCCTAGGTTCTGTCGAAAGGATGTTTGCTATTCTTTTGGAGCATTACAATGGTAAATGGCCCTTGTGGTTGAGTCCTCGCCAAGCCATTGTTTGCTCCATATCTTCCAATTCAGTGGAATACGCTAAACAGGTCCGTGCTAGGATACATGAAGCTGGTTTTCATGTTGCCATCGATGAGACAGACAGGACAATACAGAAGAAGGTACGGGAGGCTCAATTAGCCCAATTCAACTACATTCTTGTCGTTGGTGCACAAGAAGCAGAGACTGGACAGGTCAGCGTCAGGGTAAGGGACAAAGCTGAACTAGCCACAGTGAGCATTGATGACATCATCACACGTTTTAAGGAGGAAGTAGCAGCTTACAAATGA</cdnaseq>

Protein Sequence

<aaseq>MLLSLQHSASVATIPRHQQWGPPSPEISRRRSVLCHAGELKAAVAGKHWCRHRCEHAVPCPWSPDGSGLNCLSGWLILESFTGMSLVVHLQRPEKYLGDIETWNKAEQQLTEALNEFGKPWQINEGDGAFYGPKIDIGVFDALKRKFQCATLQLDFQLPLRFKLTYSAEDEAKLERPVMIHRAILGSVERMFAILLEHYNGKWPLWLSPRQAIVCSISSNSVEYAKQVRARIHEAGFHVAIDETDRTIQKKVREAQLAQFNYILVVGAQEAETGQVSVRVRDKAELATVSIDDIITRFKEEVAAYK</aaseq>

Gene Sequence

<dnaseqindica>1..207#825..890#1061..1153#1722..1814#1893..2114#3123..3194#3444..3515#3728..3823#ATGCTGCTGTCTCTGCAACACTCTGCCTCCGTTGCCACAATTCCACGCCATCAACAGTGGGGACCACCTTCACCAGAGATCTCAAGGAGGCGCTCGGTGCTCTGCCACGCCGGAGAGCTCAAGGCGGCTGTTGCTGGGAAACACTGGTGTCGCCACCGTTGTGAACATGCGGTTCCCTGCCCATGGTCCCCTGATGGCAGCGGATTGGTGGACACGTCTATGCCCGCTGGCTACATCTCGTGCTCTTTGCTCCAAATTGTGTTGATTTGAACTTCATCTATGTAGGGTATTGTGCATAGATCTAATTTGTGTTGATTTCTGTTGATTCTGTGGCTGATTTTGGGATTATATGAGTTGATTCTGTGGCTGATTTGAGTATTCTATGATTTCTTTTTGGATGTGTAAAACAGCAGTTGTAATATCTTGGTTAGTTTGGTCACGACCGGAGACCGAACTGAACTAGCCGAAACCGAATTCGTCAGTATTCATTTTTTTTTCCAATGTGTTTCGGTCTCTATTTTCAGATGACCGAACTTTTCAAAACACCGACGAACTGAACCGAATGCCCACCCCTAAATTAAATTCCTAATTCGGCAAAAGTAATGGCTCTAGAATTACTTAGAGAATTGTTTTTTGGTGAATGATGTAGTACTGAAATTGTTGTCCACATGTACATTTTGAACTATTGGCTTTTGCTATTGATATAAATGATGAACTTCCCTTTTCTAATATTATAGCAAGGGGAATTTTATATATGATGTGTTGTGTTTTTGTGTTTTGACAACCTTTTTCTTAACACTAACAACTTAATTAAAATGCTGCAGAATTGCCTCTCCGGATGGCTGATTTTGGAGTCCTTCACAGGAATGAGCTTAGTGGTGCACTTACAGGTTTGACACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGAAATCTCAGCATCCTACGGAACAATATGTGAATAACTGATGGTTATGGCTTGATCCTCGGCATGGTTGTAATGTTGTATATCTTTCTTCTTTTTTTTTTTTTTGCAGAGACCAGAAAAGTACTTAGGTGATATTGAAACCTGGAACAAAGCAGAGCAACAGCTGACAGAAGCCTTAAATGAGTTTGGAAAGCCATGGCAGGTACTATGACAGTCACTCCCCTCAGAATGTTTGTTTCAGTCTATGCTATTAGAAGTGCATTTCCAACATTCATTATTTTCACAATATGGTTAACGAGAGTTTGCACTAATTTCTTCCACTATTTTTAATTTTACCTGCACTCCGCATTATCACTAGAGTCCTTTGTCAAAAGGTATTATGCTTTATTTAGTTTTGGCTTAACTCTAATGTCGTTTTGGTAACAACATGTACTGTATGTTGATTACTATTGATAGAAATATATTTTTTTAATACTGATTTCTATTGATACAAATATATTTCTTTATGCCGGATAATATTGATAGAAATATAATTTAGTGGTAATGTTTTCAGTAAACATCTTAGGAGAGATTATTCTTCTTTGACTCAATTGGCTGGTTCCCTGTCATTTTTAAATTTCAAATAATTTCATATTCTCAATCTGAAGTTCGGATGTAATACTGGCGGAATACCCAATCTTGAAGTCTGGCTCGCAAGTTGTGATTACTGGTTGTTTCCTAGCAGTTTTTTTATCCCTTATTGGTGTACTTATTTAGATGTCTACATGCAGATCAATGAAGGTGATGGTGCCTTCTATGGTCCAAAAATTGATATTGGTGTGTTTGATGCCCTCAAGAGGAAATTTCAGTGTGCAACTCTACAGGTTATATTGAATGTCATTTTGTTTTTAATTGTAGACAGAATAGAAGGTTATTTATCTAAACTTCATTTCCTGTTACAGCTCGATTTTCAGCTGCCCCTACGCTTCAAGCTGACTTACTCTGCAGAGGATGAAGCCAAACTTGAGAGGCCTGTGATGATTCACAGGGCAATCCTAGGTTCTGTCGAAAGGATGTTTGCTATTCTTTTGGAGCATTACAATGGTAAATGGCCCTTGTGGTTGAGTCCTCGCCAAGCCATTGTTTGCTCCATATCTTCCAATTCAGTGGAATACGCTAAACAGGTAAAAGGTCCTTGTGTCATAGAATTTACTAATTACTATTAATTAGTAGCTCTTCTCCATTGATCGAAGTGTGGAAATCTTCTAGTACCTTCTGATTCGATAGGTGGTGCTTTGTCTTAGTTCTCCGTGGTGGTCCAAACTACATTTCTTTTAGTTCAATAAAAACTACTTGTTAAATTTGAGTTGCCTGATGGGTTTTAAACATGTATAATTTTTTTATATGTTACTATTATTTTGACATGGAATTTGTCTGGTGAACCTATCACTACAACCCCCAGCTGTGAAATATTTTTAAACTTTTTGTACTGCATGATGCACTGTGTCAACTTATTTCATAGAATACTTATGTACCGAACTAAATGCCAAACAATTTACACATGTCATTAGACTGTAGTATATGCATGATGCAGGTTTTTATTTTAAATTATAGCCTGATGTCGTTCGAATGCAAGTCCAATTTGATACAGATTATCCACAGCTAAGGGCTTCTTTTTGATTTATCAGATCTCACACATTTGTCTGACATAAGTTTTTTGATATGTTTGCATGAGTAACTATTCAGCTAATTGTTAATTTAAGTCCCAAACAACATTAGCTTTCTTTTTGCAAGGTGAGGATGGCTTTTAAAAAGTCTCATGATGAAATGATAACAGCAGTACAAGATTGTCTTTGGTTTCTTATTTGATCATATATACTTCCTCGATTTCTTGATGGATATAAACATCCATGCAGCGCTGGAAATGTTTATTCCTTATTAATTAGGCTTCGTTTTTGTATTGAGTGGATTTCATCACACAGCATTGGAAGTCTGTCTAGTCCATTATTATTTTAATTGGCTCAATTTATCTTAAATGGATTCCAGATGACACTTGGGTGTATTAGTAATGTACTTTTTATAAACATAATACATTTTGAAGTTTGCCCACTAATTCCACGCATGGTCAAATGAAACCTTGCTTACAGTGGAGTAAGAATTTTGGTAACTAATCAGTTCTCTTCTGTACTCAGGTCCGTGCTAGGATACATGAAGCTGGTTTTCATGTTGCCATCGATGAGACAGACAGGACAATACAGAAGAAGGTAGTTCCATCATGTCATAGTGTAATTTATGTTTGTCCTTTATTATTGTTTGCTTTCAACTCTTTGAATAGCAAAACGGAGGTATGCAACAATATGTGGTATGCATTGTTCTGATTTTTTGTTGCAGGGACTGTTCCATTTTGGTTTTGCCCATGCTGCAAGAAAGTTCTATTATTTTAGTAATTTAGTTTACACGGTTCTCAACAATGTAATCTGTGAATTGGTCACGACCATTTTTCATCTTTGCAGGTACGGGAGGCTCAATTAGCCCAATTCAACTACATTCTTGTCGTTGGTGCACAAGAAGCAGAGACTGGACAGGTTTTTACCCTTTGCACCCCTGTTTTCGCTAGAGATGTGGAATAATTATTTCTTTCTGCCATCTATATGTAGAGGTGAACTAGACAATTAAATTAAAGAGATGAAGTAGTCATCCTCAGATAACTAAAAAAACAGCCCACTGGTTCATATGAAATGTGTAGTCCTATATTATTTATACGGTTGCCTTATCATTATGGCTTACGCTATTGCAGGTCAGCGTCAGGGTAAGGGACAAAGCTGAACTAGCCACAGTGAGCATTGATGACATCATCACACGTTTTAAGGAGGAAGTAGCAGCTTACAAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027239