BGIOSGA027241

From RiceWiki
Revision as of 07:39, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027241| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027241, complete gene.| tag = OsI_286...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA027241

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027241, complete gene.

LocusTag

OsI_28672

Ensembl Transcript ID

BGIOSGA027241-TA

Ensembl Protein ID

BGIOSGA027241-PA

Length

2075

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:13262513..13264587

Sequence Coding Region

13264032..13264587,13263766..13263820,13263308..13263564,13262797..13263212,13262513..13262716

Genome Context

<gbrowseImage1> name=IndicaChromosome08:13262513..13264587 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:13262513..13264587 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGATGTCACGCGCTACCTGCTCGACCCGACCACGGATATCGCGATGTTCTCCGAGCCGCCGGTGGTTCGTGCCCGTCGCCGCCGCCATCGAGTCCCATCCCACGCCGGCGATTCACGTCGTCGAGCGGGAGCGGCCCGCTCAGGTCCAGATCTCGCGATTCGATCCCTGCTCTCCTCCGCCTCCGGCGAGGATGCTTCCCGGCGGCCAGCAGCAGCAACCTCATCCAGCGCCGGGGGGACTGGATCTCCGCTCGGATGAGATTCACGCCCTGAAACAACGACGCCGTCCGCCGCCACATCCTCAGTCCTCGTCACCGCCTGAAGGTTTGCTCGGCGCCGCAAACCCTGACCGGCCTGACGACGACGAGCTTGATGCTATCCTAAGCAGCTTCCGTGATGAGGCCGCGCACGGCGACAGTGGTGGTGGCGTGGCTCGCGTCCAAGTGCTCCCCGTCGAGCAAGATGCCAACCTGGTGCCTTTCCTGCCGCTCCGGCATGGCCAACTGGACTGCTCCCGCTGCCACCTTGTCAGGCATGTCATGCACGTCGCTGTTCTACCTTATGTTAAATTTTCTCTAAAACTTGTATGGGAAGAGGTATTTCATAGAATACGGAGAATGTATGTGATATCGGTTCGTTCCAATGTTTACAGCCTCAGCAAGTGGACGCAGGAATGGGCTAGCGAGTTCATTGCGAGAAACATTGACACGATGAGAAATAATACAAACGGGCAGCTTCTGGACAGCGGCTACTCCAATTTAGTTGAATCCGTCCGCACCAATGTGAATGTCCCACACACGGCGGTGGAAGTGAACTTGCTCCAGACGATCATGTCCGCCCCATCGGCTGATCATCATCAGAATGCTGCAGATCAGGTAGCAGCCCCAGCGGCGCAACCATTCTCCGCAGCTCCTCCAGTAGCATTACCTCCAAAGGCGGCGCCGCGAAAAGCGCGCAAGGATCGGGATTATGCTAGCATGCTGGTTGCAGTTGAAGAATTCTATGTCGCCGCAACCAGTCGGCCTGTACCAAACTCAGACGTAGAGATATTGGAATCTTCTCATGTCTCCCAGCAGCAGGATGGAGGTAGAGCTATCATATACCCAAGCTTGCAAGCCAGAAGGGGCAAGGCGAAGCAGGAGGTACCGAGAAGGAATGCAAAAGATGTTCTAGAGTATCTGAGCTTGGCGAGGAAGGAGACTGAGAAGGAAATCAATACTCTGTCCTCCTTCGATGGAATTTACCGGAACGACGGAACATTAAGCTACCTGATGACAGAGGTACGTCGACTCAACAGGAAGATATGGAGGCTCCAGAAGAATGCTCCGAGTACACTGTCGAGTAGGCTGTTGGCGAGCGTGAAGGAGATTGATGATATTAAAGTTGAGAAGGGAAGGCTGTATGCGCAATTCATAAGTGCGTTAAAGAAGCTATGCCGAAAGAAGATGGACGATGGTGGTAGTGCCCCATCTGCCAACAATTAA</cdnaseq>

Protein Sequence

<aaseq>MAMSRATCSTRPRISRCSPSRRWFVPVAAAIESHPTPAIHVVERERPAQVQISRFDPCSPPPPARMLPGGQQQQPHPAPGGLDLRSDEIHALKQRRRPPPHPQSSSPPEGLLGAANPDRPDDDELDAILSSFRDEAAHGDSGGGVARVQVLPVEQDANLVPFLPLRHGQLDCSRCHLVRHVMHVAVLPYVKFSLKLVWEEVFHRIRRMYVISVRSNVYSLSKWTQEWASEFIARNIDTMRNNTNGQLLDSGYSNLVESVRTNVNVPHTAVEVNLLQTIMSAPSADHHQNAADQVAAPAAQPFSAAPPVALPPKAAPRKARKDRDYASMLVAVEEFYVAATSRPVPNSDVEILESSHVSQQQDGGRAIIYPSLQARRGKAKQEVPRRNAKDVLEYLSLARKETEKEINTLSSFDGIYRNDGTLSYLMTEVRRLNRKIWRLQKNAPSTLSSRLLASVKEIDDIKVEKGRLYAQFISALKKLCRKKMDDGGSAPSANN</aaseq>

Gene Sequence

<dnaseqindica>1..556#768..822#1024..1280#1376..1791#1872..2075#ATGGCGATGTCACGCGCTACCTGCTCGACCCGACCACGGATATCGCGATGTTCTCCGAGCCGCCGGTGGTTCGTGCCCGTCGCCGCCGCCATCGAGTCCCATCCCACGCCGGCGATTCACGTCGTCGAGCGGGAGCGGCCCGCTCAGGTCCAGATCTCGCGATTCGATCCCTGCTCTCCTCCGCCTCCGGCGAGGATGCTTCCCGGCGGCCAGCAGCAGCAACCTCATCCAGCGCCGGGGGGACTGGATCTCCGCTCGGATGAGATTCACGCCCTGAAACAACGACGCCGTCCGCCGCCACATCCTCAGTCCTCGTCACCGCCTGAAGGTTTGCTCGGCGCCGCAAACCCTGACCGGCCTGACGACGACGAGCTTGATGCTATCCTAAGCAGCTTCCGTGATGAGGCCGCGCACGGCGACAGTGGTGGTGGCGTGGCTCGCGTCCAAGTGCTCCCCGTCGAGCAAGATGCCAACCTGGTGCCTTTCCTGCCGCTCCGGCATGGCCAACTGGACTGCTCCCGCTGCCACCTTGTCAGGCATGTCATGCACGTCGCTGGTAAGATTTTTTTTCATCTATACTACTCTTTCTTAGGGGTCCTTTAGATCAGACGAGTGAAAAAACGGAGAAATTGAAAAAACATAGGATTCTAACAGGAATAGAGAATTACAAAACACAGGGAAAACATATGAATGTCCGTTTGATTGGGCCGTAGGAAAAACACAAGAATTTGAGAAGAGATAATAATTAAAAGATTATTTTTATGAAGTTCTACCTTATGTTAAATTTTCTCTAAAACTTGTATGGGAAGAGGTATTTCATAGGTATTTTATTGGACTCCATAGAGTTCAGTCCTTTGATTCATAGGGCTATATAGGAAAAAAATCCTATAGAAATGAAATCTTCTAAAACTCCTATGAATTTCCTTTGAATAATCAAAGAGGGCCTTATACATAATTACATATACACCCTGCCTGATATTTGACCATGATAAATTAACCGATCTCTGCCTGATATTGAATCAGAATACGGAGAATGTATGTGATATCGGTTCGTTCCAATGTTTACAGCCTCAGCAAGTGGACGCAGGAATGGGCTAGCGAGTTCATTGCGAGAAACATTGACACGATGAGAAATAATACAAACGGGCAGCTTCTGGACAGCGGCTACTCCAATTTAGTTGAATCCGTCCGCACCAATGTGAATGTCCCACACACGGCGGTGGAAGTGAACTTGCTCCAGACGATCATGTCCGCCCCATCGGCTGATCATCATCAGAATGGTGAGTTTGTAAAAATGTATGCATGAAATGTTTGCAGGAACCATTTCAATTAGTTGTACTGATATATAATTTGATATTAATTGTATGCACTGCAGCTGCAGATCAGGTAGCAGCCCCAGCGGCGCAACCATTCTCCGCAGCTCCTCCAGTAGCATTACCTCCAAAGGCGGCGCCGCGAAAAGCGCGCAAGGATCGGGATTATGCTAGCATGCTGGTTGCAGTTGAAGAATTCTATGTCGCCGCAACCAGTCGGCCTGTACCAAACTCAGACGTAGAGATATTGGAATCTTCTCATGTCTCCCAGCAGCAGGATGGAGGTAGAGCTATCATATACCCAAGCTTGCAAGCCAGAAGGGGCAAGGCGAAGCAGGAGGTACCGAGAAGGAATGCAAAAGATGTTCTAGAGTATCTGAGCTTGGCGAGGAAGGAGACTGAGAAGGAAATCAATACTCTGTCCTCCTTCGATGGAATTTACCGGAACGACGGAACATTAAGCTACCTGATGACAGAGGTATATATCAGCTGTGTGTACGTGTTAAAGGAACCATTTTATTTTATGTGACATTTGGTTCTTAACTTGTCATATCGTAGGTACGTCGACTCAACAGGAAGATATGGAGGCTCCAGAAGAATGCTCCGAGTACACTGTCGAGTAGGCTGTTGGCGAGCGTGAAGGAGATTGATGATATTAAAGTTGAGAAGGGAAGGCTGTATGCGCAATTCATAAGTGCGTTAAAGAAGCTATGCCGAAAGAAGATGGACGATGGTGGTAGTGCCCCATCTGCCAACAATTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027241