BGIOSGA027441

From RiceWiki
Revision as of 07:43, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027441| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027441, complete gene.| tag = OsI_282...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA027441

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027441, complete gene.

LocusTag

OsI_28278

Ensembl Transcript ID

BGIOSGA027441-TA

Ensembl Protein ID

BGIOSGA027441-PA

Length

3238

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:8102164..8105401

Sequence Coding Region

8105156..8105401,8104427..8105092),complement(8102903..8104288,8102164..8102169

Genome Context

<gbrowseImage1> name=IndicaChromosome08:8102164..8105401 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:8102164..8105401 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGAGGTGCATCTATCGACTCTTGCAATCTCCGTTCTTGGAAAAGCGGCCTTTTGTGCTGCCAGCGAGATTAAATCAGCGTGGAATTTCAAGAAAGAAGTGAGGAAGTTGGAAAGATCTCTGAAGTCCATCTGTGGTGTTCTTAAAGATGCAGAGCGCAAGCAGTCTACTTCTTGTGCTCTTAAAGTGTGGCTGGAAGATTTAAAGGATGTCGTCTACGACATTGATGATGTTCTGGATGATCTTGTTTACCCATTCGAATTGAGCCATAAGATAACAGTAGTTCGTCAAAAGCTTGATGAGATAGCAGCTAACAGAAGGGAGTTTGCATTAACAGAGGAGATCATAGATACGCAATTTTTCAGTAGCAATACCAGGGAAACACATTCCTTCATCAATGAGTTAGACATTGTTGGTAGAGACGAAGCGAAAAACAAGATTGTTGAAATCATACTGAGTGCTGCGGATGCATATGCTTTTTCTGTGCTTCCTATTGTTGGTTTAGGAGGCATAGGGAAAACTGCACTGGCCAAACTAGTGTACAATGATATGAGGATAAAGAAAATGTTTGAGAAGAACTTATGGGCTTGCGTATCTAATGTATTTGATCTAAAGAAGATATTGGATGACATAATCCAGTCAGATACAGGTGAAAGCAACAAACAACTGAGCCTGCAAACGCTACAAAACAAGCTTCGTGGGTTTTTACAGGAAAACAAATATTTACTAGTTCTCGATGACATATGGAGTGATAATGTTAATGACTGGGAACAACTTAAAAACCTCCTATCTAGTGGTGGAAGAGGAAGTGTTGTTGTAGTTACCACACATAATATGAATGTTGCGTCGGTGGTGAAGACGTTGGAGCCATACTATGTGCCAGAGCTTTCATTTGATGAATGTATGCAGGATGTTAAGGAGTGGTTGCGTATTAAGGATGCAAATCTGTGGAATATTGAGCAAAATAAATGCGATATATTGCCAGCCTTAAAATTGAGTTATGATGCACTTCCACCTCATCTTAAGGCATGCTTCTCTTGCCTATCTGTTTTTCCAAAAGACTACGTGATTTTGAGAGAGCTTTTAATTATGTTCTGGATGGCACTAGGGTTATTGCATAAAACCAGAGAAGGAGATGAAATAGAAACTATTGGAGGACAATACTTTAATGAACTGGATCAAAGATCTCTTTTCCAAGACCATTATGTTTATAATGGCTCAATTCAAAGTTGTAAAATGCATGATCTTGTTCATAATCTTGCGATGTTTGTGTGCCATAAGGAGCATGCTATCGTTAATTGTGAAAGTAAAGATTTATCTGAAAAGGTTAGGCACCTTGTGTGGGATCGCAAGGACTTCTCAACAGAGATTGAATTTCCTAAGCACCTGAGAAAGGCAAACAAGGCAAGGACATTTGCAAGCATTGATAACAATGGGACCATGACTAAAGCTTTTCTTGACAACTTCTTGTCAACCTTTACACTCCTGCGTGTTCTTATTTTTTCTGACGTTGATTTTGATGAGATACCGAGTTCAATTGGAAATCTTAAGCACTTAAGGTACCTGGATCTACAATGGAATGGGAAAATTAAGTTCTTACCGAATTCCCTATGTAAGTTGGTGAACTTGCAAACACTGCAACTTAGTCGGTGCGACCAATTAGAGAAGATGCCAAAGGACGTGCATAGACTTATAAGCCTTAGATTCTTGTGCCTCACACTGAAGAATAAGTATTTATCAGAACATGATGGATTTTGTAGTTTGACTTCACTGACATTTCTGTTCTTAAATTCATGTGCTGAGTTATCATCAATGACAAATGGATTTGGTAGTCTAACTTCCCTCCGAAAGCTCTACATCTTCAACTGTCCAAAGTTGGCTACTCTACCCTCGACCATGAATCAACTCTCCACACTTCAAACATTATCGATTAATAATTGCCATGAGCTGGATTTGTTGGAACCTTCAGAAGCCATGGGTGGCCTGGCTTGCCTTGATGTGCTCCAGCTTGTTGGGCTTCCGAAGCTAGTCTGTTTTCCAGGGAGCTTTATTTCTGCTGCTACCTCTCTTCAATATTTTGGTATTGGAAATTGCAATGGATTAATGAAACTGCCAGATTTCATTCAAAGTTTCACTTCTCTCAAGAAAATTGTGATCAATGGCTGTCCTGAGTTGAGCAGAAGATGTGCTGTTAAATCAGGGGAAGACTTCCATCTCATTTCCCATGTTCCCCAAATAACAATTGACAAGAAAACATATCGGAAAATTACTCCATCACATCCAGAATGTTCTTCAATCTAA</cdnaseq>

Protein Sequence

<aaseq>MAEVHLSTLAISVLGKAAFCAASEIKSAWNFKKEVRKLERSLKSICGVLKDAERKQSTSCALKVWLEDLKDVVYDIDDVLDDLVYPFELSHKITVVRQKLDEIAANRREFALTEEIIDTQFFSSNTRETHSFINELDIVGRDEAKNKIVEIILSAADAYAFSVLPIVGLGGIGKTALAKLVYNDMRIKKMFEKNLWACVSNVFDLKKILDDIIQSDTGESNKQLSLQTLQNKLRGFLQENKYLLVLDDIWSDNVNDWEQLKNLLSSGGRGSVVVVTTHNMNVASVVKTLEPYYVPELSFDECMQDVKEWLRIKDANLWNIEQNKCDILPALKLSYDALPPHLKACFSCLSVFPKDYVILRELLIMFWMALGLLHKTREGDEIETIGGQYFNELDQRSLFQDHYVYNGSIQSCKMHDLVHNLAMFVCHKEHAIVNCESKDLSEKVRHLVWDRKDFSTEIEFPKHLRKANKARTFASIDNNGTMTKAFLDNFLSTFTLLRVLIFSDVDFDEIPSSIGNLKHLRYLDLQWNGKIKFLPNSLCKLVNLQTLQLSRCDQLEKMPKDVHRLISLRFLCLTLKNKYLSEHDGFCSLTSLTFLFLNSCAELSSMTNGFGSLTSLRKLYIFNCPKLATLPSTMNQLSTLQTLSINNCHELDLLEPSEAMGGLACLDVLQLVGLPKLVCFPGSFISAATSLQYFGIGNCNGLMKLPDFIQSFTSLKKIVINGCPELSRRCAVKSGEDFHLISHVPQITIDKKTYRKITPSHPECSSI</aaseq>

Gene Sequence

<dnaseqindica>1..246#310..975#1114..2499#3233..3238#ATGGCTGAGGTGCATCTATCGACTCTTGCAATCTCCGTTCTTGGAAAAGCGGCCTTTTGTGCTGCCAGCGAGATTAAATCAGCGTGGAATTTCAAGAAAGAAGTGAGGAAGTTGGAAAGATCTCTGAAGTCCATCTGTGGTGTTCTTAAAGATGCAGAGCGCAAGCAGTCTACTTCTTGTGCTCTTAAAGTGTGGCTGGAAGATTTAAAGGATGTCGTCTACGACATTGATGATGTTCTGGATGATGTGGCCACCAAAGATTTGGAGTAAAAGGTTCATAATGGTTTCTATGCTGGGGTCAGTCGGCAGCTTGTTTACCCATTCGAATTGAGCCATAAGATAACAGTAGTTCGTCAAAAGCTTGATGAGATAGCAGCTAACAGAAGGGAGTTTGCATTAACAGAGGAGATCATAGATACGCAATTTTTCAGTAGCAATACCAGGGAAACACATTCCTTCATCAATGAGTTAGACATTGTTGGTAGAGACGAAGCGAAAAACAAGATTGTTGAAATCATACTGAGTGCTGCGGATGCATATGCTTTTTCTGTGCTTCCTATTGTTGGTTTAGGAGGCATAGGGAAAACTGCACTGGCCAAACTAGTGTACAATGATATGAGGATAAAGAAAATGTTTGAGAAGAACTTATGGGCTTGCGTATCTAATGTATTTGATCTAAAGAAGATATTGGATGACATAATCCAGTCAGATACAGGTGAAAGCAACAAACAACTGAGCCTGCAAACGCTACAAAACAAGCTTCGTGGGTTTTTACAGGAAAACAAATATTTACTAGTTCTCGATGACATATGGAGTGATAATGTTAATGACTGGGAACAACTTAAAAACCTCCTATCTAGTGGTGGAAGAGGAAGTGTTGTTGTAGTTACCACACATAATATGAATGTTGCGTCGGTGGTGAAGACGTTGGAGCCATACTATGTGCCAGAGCTTTCATTTGATGAATGTATGCAGGTATTTATTCGCTATGCATTCAGAGATGAGGAAAAAAAGGACACACTCTTGTTAGAAATTGGCAAATGTATTGTGGAGAAATGCCACGGTGTTCCCTTGGCAGCTTAGACATTGGGGTCTGTACTGTTTGGTAAACAGGATGTTAAGGAGTGGTTGCGTATTAAGGATGCAAATCTGTGGAATATTGAGCAAAATAAATGCGATATATTGCCAGCCTTAAAATTGAGTTATGATGCACTTCCACCTCATCTTAAGGCATGCTTCTCTTGCCTATCTGTTTTTCCAAAAGACTACGTGATTTTGAGAGAGCTTTTAATTATGTTCTGGATGGCACTAGGGTTATTGCATAAAACCAGAGAAGGAGATGAAATAGAAACTATTGGAGGACAATACTTTAATGAACTGGATCAAAGATCTCTTTTCCAAGACCATTATGTTTATAATGGCTCAATTCAAAGTTGTAAAATGCATGATCTTGTTCATAATCTTGCGATGTTTGTGTGCCATAAGGAGCATGCTATCGTTAATTGTGAAAGTAAAGATTTATCTGAAAAGGTTAGGCACCTTGTGTGGGATCGCAAGGACTTCTCAACAGAGATTGAATTTCCTAAGCACCTGAGAAAGGCAAACAAGGCAAGGACATTTGCAAGCATTGATAACAATGGGACCATGACTAAAGCTTTTCTTGACAACTTCTTGTCAACCTTTACACTCCTGCGTGTTCTTATTTTTTCTGACGTTGATTTTGATGAGATACCGAGTTCAATTGGAAATCTTAAGCACTTAAGGTACCTGGATCTACAATGGAATGGGAAAATTAAGTTCTTACCGAATTCCCTATGTAAGTTGGTGAACTTGCAAACACTGCAACTTAGTCGGTGCGACCAATTAGAGAAGATGCCAAAGGACGTGCATAGACTTATAAGCCTTAGATTCTTGTGCCTCACACTGAAGAATAAGTATTTATCAGAACATGATGGATTTTGTAGTTTGACTTCACTGACATTTCTGTTCTTAAATTCATGTGCTGAGTTATCATCAATGACAAATGGATTTGGTAGTCTAACTTCCCTCCGAAAGCTCTACATCTTCAACTGTCCAAAGTTGGCTACTCTACCCTCGACCATGAATCAACTCTCCACACTTCAAACATTATCGATTAATAATTGCCATGAGCTGGATTTGTTGGAACCTTCAGAAGCCATGGGTGGCCTGGCTTGCCTTGATGTGCTCCAGCTTGTTGGGCTTCCGAAGCTAGTCTGTTTTCCAGGGAGCTTTATTTCTGCTGCTACCTCTCTTCAATATTTTGGTATTGGAAATTGCAATGGATTAATGAAACTGCCAGATTTCATTCAAAGTTTCACTTCTCTCAAGAAAATTGTGATCAATGGCTGTCCTGAGTTGAGCAGAAGATGTGCTGTTAAATCAGGGGAAGACTTCCATCTCATTTCCCATGTTCCCCAAATAACAATTGACAAGAAAACATATCGGAAAATTACTCCATCACATCCAGAATGTTCTTCAGTAAGTTGAATTACTTAGTTACGTATTTCATTATAGATGGGAAATAGTTTTACTTACCTGTCCATTTCTTGATTTATCTTAAACCTGTATTTGTTGCCTTGTAATGAAGTTTCATACATTTCTTAGAAATGTGTGATTAGTCACCGAAGGAAAAGTCTATCTGTGACTGTCAAGCTATATTCCTGCTAGAGATTTATTTTGCCATCTATGATGAGTTTCTGTTATAATTGCATCTGAGTTTAATTTTCCCTAAATTGTTTCTGTTTAAAACTTTAAATGCACCGGAGAAGTCTGGTTTCTGTTATGGTTGTGGCCTCCAACTCCACTTTCCATGTCAGAGGCCACGGTCTGGCCCTGATCCCTCTACACCATAGCAACGCGAGATGTATTATGGAGTGCACCACTCTTTGCTTTCCTCTAACCCCACAGGCCACGCCCAACACATTATATGTGTTTTTTCACCTTCAGAATTCACTTTCATGCATTGTATTGAACACATATTTTCGGTATTACTAGAATAGTTTGTGGGTTTCTGTTAAATTCTGTGCTGCCTTTCTGCTGTTGGAGCAAAAAGAGGTGTGTTAGCATACATTTAGTACCAAAGTTTATGTTAACAGTATCATCACTATAACAGTTTATGAATTAGGTTTATGGACCAGGAAGTTGGGTCAAAGTTTGTTATCCTTTTTCAAAGTACCTAAATGTGAAATGTGATGTACATGTTCTTGCACAGATCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027441